CsaV3_4G026480 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGTCTATTTATTTTGTTAATCCAACATTTAACCAATTTAAAAAGTAGTGTTGATAATCAAAACAATCATAAGTCTCATCCAAATTTGGATAAAAGGAGAAGTAGAGCAAAGCAAAGCAAAGCAAAGCAAGAGCGGTTAGGGAAATACAAAAGAAAAAAGCAAAGTAAAGCAAAATAAAAAAAAAAAAAAAAGAAACGAGAAAGCCATAAGTGAAGTGAATTGAAAGCTATGGGTCAGGCTTTATAAAAGGAGGCATCACTTCCTCTCTTTGGGGTCCGGCATGATCCGCAATTGGATCAAGCCATAATGGGTCACCTTGTCGGTGGGTGGTCCGCCGTCGCCACGGCTCTATGTGCTCTGCTTCTCTTCTTGTCACTGCCTCCGTCGGCGTCCGAAAAAGTAACAGTGTCAGTTTATTACGAAGCTCTGTGCCCATTCTGTGCCAACTTCGTGGTTTATCATTTGGTGAAGCTTTTTCAAAATGGATTAATCTCCGCCGTCAATCTCCGGATGATCCCTTGGGGCAACGCCTGGATCCAGCCCGACGGCTCCTTCTTTTGCCAAGTAAACCTTCTCTAATTTTTCTTTCACATTTTTTTTTTCTTTTCTAAATAAGTTTGTTTCTAGGTTTTGGTTCCCTAAATATTTGGTTTTTGGGATGAAAAAGTAGACTTTTGTTTTTTGTTTTAAATTGAAATATGAAAACCTTAAATAGAACGTTTTGAAAAAAAATAAACATAATTTTCATAATTCCAAAACCATTTTATCCAAATAGGTGATTTTTGTATTGATGATCCCTTTCTTTTCAACAACATTATGATTAATGATCTATCCTCGTATACGTATAAACATTTTACTTACATTCCAGTGTAATATTGGATTTTTATAACTATTGCTTTAGGACAACTATCTCTAGTAAGCTTTGAAGATCATTACCCATGAAAAGGTCACCCGTACAAACAAAATTCTTCCAAAGATTTCCACTCAAAACGTAGTTTCATTTTTAAGTGATTAACACAACAAACAAACCTATAGATAGAAGTAGTACTTACTATCTTAATTTTTTTAAAAAACAACTCAAAACTAAAATGAGTCTGAATTGTAAGAATGCTAAATCGGTTAGACTTGTTTGTTAACTTTTAAATTACTATTTATCTTAGTTAAGTTAGGTTCGTGTCTCTCAGTTATTATAATTACTTGGAAGGCCATCTATAATAACTCTCTTTTGTTACATTAAATATTATTTTAAAGTTTTCAATTAGTTACACTAAACCCTATTTCAAAACTCTCATTTCTCTACCTTATTTACTATTTGTTATAGTTTTTAATATTTTACATTTCATCATTTTTTTTTGTTGGTTCTTTGTTATAATATTTAATATTTTTTTATAAAATTAAAATAATTCATACACCAAACACATAATATTATAACTCAAACTAAAATAATCTATACATTAAATAAAAACTATTTTAATCAAATTATAATAACTCATTCTTTCTTGCTCCTAACATCTCCATAGTATAATTCATTAGTTTAATCAAAGCAATGTGCTTAGATGAAGTCAACGAGGTTGTAAACCATGTTTAAGGTTAAATTAACTTCCGATTTTCCACGTAACAAACCTTTAAATTTTAAAATATGTTTGTTAATCTATTGAAATGTTAAAATCTATTCGCCCCAAAACTTAAATTTCCTAAACTTGTTAAACCACAGTTTCCAAAGTTCATTTTCTTTTATTAAATATGAAATTAGGGTATGGAATAAAGTGGAAGAAAAGAGAGACCGGGGGATTATTATTATTATTATATATATATAGATAACAAAATTAAAATTAAAAAAAAAAATATGTTGCTTTTAGAATCTGGACCGTTGAATCACAGAATTCAGAAACATTTTTTTAAAGAGAATCTAAATTATATATGAGGCATATATTTCAATTTAAAAATATAAAACAAAATTTGGATTGAAAATCAAATAAAATGTATTACCAACTAAAATAATTAAGTTAAGACTTCAGCAACTGATAGTATCTTGTATTTGAACTGGTATAAGTAGTGGGAAAAAGGATCGAAAGATGCGACTGAAAGAGCTCCCGAGATGAAGATGGAGGGTCAAAAACGTAAAGGAGGCAGGATGGACAGATTGTCCAGTATGGATGGTAGTACATGGACGGTGGTTGAAGTCAGCAGCTGTTTTAAGGCCTCATATGGGATCCCTGGGGAAGAGGATCTACTTACTTTCTGAAAACTAATAATTCAAAAGCTACTAACCCCATTACTAATTAATGTTGGTCAAAATTATTTGTTCAAAAAAGAGTATATGGGTCATTTAATACTCATTTAGTCATGTTGCTATTGACAGTGCCGTACCCCATTTACAATTATGATTATTAATGCTCTTGTCTCTTGCTTAACTCAGTTTTCTTTTATTATTCTTTCCTAATGCAATTTTAATTTATCAATTGTTGAAATCTCAAATACATACTAAGTAAGTAGTTACTAACTAACTATGTTATTGTTCGTGTGCAGCATGGACCAGATGAATGCATGTTGAATACCATTGAAGCTTGCACCATTTCAGTTTACCCTGATACAGTACTAACTCTTTTACTATTATCACTTCAATTACAAATATAGTTAATTACCAATAAATAATAGGATGGGCGGAAATGTGTCTAATCCATGGTAATCACCAACCAATAATAAAATATTATAAGAGTTTTCTTAACACTGAAATGCAGTAGAGTTTGAAATTGAAATTTATCTAGACATAGACAGGTAAACTGCACTGGTCACTCATTGTATAAATTGCTATAGAAATGGGCACGATATAAATGTTAAATCTACTAAACTTATGCGTTTTGGCATGTGAAGGAAGAACATTTCAGATTCATCCATTGTGTTGAGGGATTGACAGTGCAAAACAGACACAATGAATGGACAAAGTGTTTTGATATTGCACAGTTGAGTGCCATACCAATAGATTGCTACAGAAATGGGCATGGAAAAATGGTAGCATTGCTTACTTAACAGCTTCTATTTCTGTTTCTTTCTTGATTGAATCCTGAGTAAGTCAATGAAATGCAGCTTGAACAATACTATGCTTCTGAAACTACTCGCCTCAATCCGCCTCACCGATTTGTTCCATGGGTCATTGTCGATAATCACCCTCTCCAGGAGGTTGGTCAGCTTCGATTCAAGCTAGTTTTTTCCTTGTTCTTTGCTTTGTAATTCTTTGAAATCAATCTGTTTTCTTTTGTCTGAATCAGGACTACCAAAACTTCATGGCCTACATTTGCAAAGCGTATAAAGGCAGTGCTGTACCAGAAGCTTGCAAGTCTATAAACCTCAAAAACCGCCAATACCTGGATAATGCCAGCGGAGGAAGTCAAGTCTGTTATGCAACTACAACGAGAAACTCAACATTATAAACACAGGGAGAGATCTCAAGATCAAACCAGCCAGAAAATTAGATACTGCAGTCAATGGAGAAGTTTGTCATTTGAAATAACAATACTAGAAGATAATTATAGAATATAACTATTTCAGTTTCAGAATTATGATAACTATTTAAGTTCATGTGCTGATTGTCCTTTGCTCAGACAGTAGATAATTCTACAATTGTCAATATCTCTCCGTCAACCAAAAAAAGATTGAGGGGAAGAGTAAAACCTGATATTATGAACTCTATTTTATGAAGCTTATGGTGCTTGAATCCAATATCATCTGTGAAAGATGGTGGCTAGCTCTTGTCCTTCTTGCTTTCGGGTGGCTTGTAACTATTTGCTGCGTGTTCTAACATAAGTAATATTATCATAGAATATTGTCTCTGAATTACATCAGAATTGACATAAACATCCCATGTTCATAATATTTTCATTGTACGATCCATAGCTATTAACAGATGTAAAGTGGAGGAAATAATACCAAAACTTAACTCATCTCCAAGGAAGTATAGATATACAATGAGAAAGATTAAAGTTAATAACAGAAAAGTAACAAACTAAC ATGGGTCACCTTGTCGGTGGGTGGTCCGCCGTCGCCACGGCTCTATGTGCTCTGCTTCTCTTCTTGTCACTGCCTCCGTCGGCGTCCGAAAAAGTAACAGTGTCAGTTTATTACGAAGCTCTGTGCCCATTCTGTGCCAACTTCGTGGTTTATCATTTGGTGAAGCTTTTTCAAAATGGATTAATCTCCGCCGTCAATCTCCGGATGATCCCTTGGGGCAACGCCTGGATCCAGCCCGACGGCTCCTTCTTTTGCCAACATGGACCAGATGAATGCATGTTGAATACCATTGAAGCTTGCACCATTTCAGTTTACCCTGATACAGAAGAACATTTCAGATTCATCCATTGTGTTGAGGGATTGACAGTGCAAAACAGACACAATGAATGGACAAAGTGTTTTGATATTGCACAGTTGAGTGCCATACCAATAGATTGCTACAGAAATGGGCATGGAAAAATGCTTGAACAATACTATGCTTCTGAAACTACTCGCCTCAATCCGCCTCACCGATTTGTTCCATGGGTCATTGTCGATAATCACCCTCTCCAGGAGGACTACCAAAACTTCATGGCCTACATTTGCAAAGCGTATAAAGGCAGTGCTGTACCAGAAGCTTGCAAGTCTATAAACCTCAAAAACCGCCAATACCTGGATAATGCCAGCGGAGGAAGTCAAGTCTGTTATGCAACTACAACGAGAAACTCAACATTATAA ATGGGTCACCTTGTCGGTGGGTGGTCCGCCGTCGCCACGGCTCTATGTGCTCTGCTTCTCTTCTTGTCACTGCCTCCGTCGGCGTCCGAAAAAGTAACAGTGTCAGTTTATTACGAAGCTCTGTGCCCATTCTGTGCCAACTTCGTGGTTTATCATTTGGTGAAGCTTTTTCAAAATGGATTAATCTCCGCCGTCAATCTCCGGATGATCCCTTGGGGCAACGCCTGGATCCAGCCCGACGGCTCCTTCTTTTGCCAACATGGACCAGATGAATGCATGTTGAATACCATTGAAGCTTGCACCATTTCAGTTTACCCTGATACAGAAGAACATTTCAGATTCATCCATTGTGTTGAGGGATTGACAGTGCAAAACAGACACAATGAATGGACAAAGTGTTTTGATATTGCACAGTTGAGTGCCATACCAATAGATTGCTACAGAAATGGGCATGGAAAAATGCTTGAACAATACTATGCTTCTGAAACTACTCGCCTCAATCCGCCTCACCGATTTGTTCCATGGGTCATTGTCGATAATCACCCTCTCCAGGAGGACTACCAAAACTTCATGGCCTACATTTGCAAAGCGTATAAAGGCAGTGCTGTACCAGAAGCTTGCAAGTCTATAAACCTCAAAAACCGCCAATACCTGGATAATGCCAGCGGAGGAAGTCAAGTCTGTTATGCAACTACAACGAGAAACTCAACATTATAA MGHLVGGWSAVATALCALLLFLSLPPSASEKVTVSVYYEALCPFCANFVVYHLVKLFQNGLISAVNLRMIPWGNAWIQPDGSFFCQHGPDECMLNTIEACTISVYPDTEEHFRFIHCVEGLTVQNRHNEWTKCFDIAQLSAIPIDCYRNGHGKMLEQYYASETTRLNPPHRFVPWVIVDNHPLQEDYQNFMAYICKAYKGSAVPEACKSINLKNRQYLDNASGGSQVCYATTTRNSTL* Homology
BLAST of CsaV3_4G026480 vs. NCBI nr
Match: XP_004148608.1 (gamma-interferon-responsive lysosomal thiol protein [Cucumis sativus] >KGN54401.1 hypothetical protein Csa_018063 [Cucumis sativus]) HSP 1 Score: 512.7 bits (1319), Expect = 1.7e-141 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. NCBI nr
Match: TYK10933.1 (gamma-interferon-inducible lysosomal thiol reductase [Cucumis melo var. makuwa]) HSP 1 Score: 486.5 bits (1251), Expect = 1.3e-133 Identity = 224/238 (94.12%), Postives = 230/238 (96.64%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. NCBI nr
Match: XP_008464223.1 (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase [Cucumis melo] >KAA0037728.1 gamma-interferon-inducible lysosomal thiol reductase [Cucumis melo var. makuwa]) HSP 1 Score: 485.3 bits (1248), Expect = 2.9e-133 Identity = 223/238 (93.70%), Postives = 229/238 (96.22%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. NCBI nr
Match: XP_038883768.1 (gamma-interferon-responsive lysosomal thiol protein isoform X1 [Benincasa hispida]) HSP 1 Score: 438.0 bits (1125), Expect = 5.4e-119 Identity = 202/237 (85.23%), Postives = 217/237 (91.56%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. NCBI nr
Match: XP_022966573.1 (gamma-interferon-inducible lysosomal thiol reductase isoform X2 [Cucurbita maxima]) HSP 1 Score: 414.8 bits (1065), Expect = 4.9e-112 Identity = 192/238 (80.67%), Postives = 211/238 (88.66%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. ExPASy Swiss-Prot
Match: Q9SV73 (Gamma-interferon-responsive lysosomal thiol protein OS=Arabidopsis thaliana OX=3702 GN=GILT PE=2 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.9e-34 Identity = 75/200 (37.50%), Postives = 109/200 (54.50%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. ExPASy Swiss-Prot
Match: Q9ESY9 (Gamma-interferon-inducible lysosomal thiol reductase OS=Mus musculus OX=10090 GN=Ifi30 PE=1 SV=3) HSP 1 Score: 109.8 bits (273), Expect = 4.4e-23 Identity = 68/212 (32.08%), Postives = 103/212 (48.58%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. ExPASy Swiss-Prot
Match: Q499T2 (Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus norvegicus OX=10116 GN=Ifi30 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.9e-22 Identity = 67/214 (31.31%), Postives = 104/214 (48.60%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. ExPASy Swiss-Prot
Match: A6QPN6 (Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus OX=9913 GN=IFI30 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 5.4e-21 Identity = 58/183 (31.69%), Postives = 94/183 (51.37%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. ExPASy Swiss-Prot
Match: P13284 (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens OX=9606 GN=IFI30 PE=1 SV=3) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20 Identity = 61/192 (31.77%), Postives = 91/192 (47.40%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. ExPASy TrEMBL
Match: A0A0A0L2Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312830 PE=3 SV=1) HSP 1 Score: 512.7 bits (1319), Expect = 8.3e-142 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. ExPASy TrEMBL
Match: A0A5D3CGA6 (Gamma-interferon-inducible lysosomal thiol reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00130 PE=3 SV=1) HSP 1 Score: 486.5 bits (1251), Expect = 6.4e-134 Identity = 224/238 (94.12%), Postives = 230/238 (96.64%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. ExPASy TrEMBL
Match: A0A5A7T4J7 (Gamma-interferon-inducible lysosomal thiol reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00210 PE=3 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 1.4e-133 Identity = 223/238 (93.70%), Postives = 229/238 (96.22%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. ExPASy TrEMBL
Match: A0A1S3CLF7 (gamma-interferon-inducible lysosomal thiol reductase OS=Cucumis melo OX=3656 GN=LOC103502154 PE=3 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 1.4e-133 Identity = 223/238 (93.70%), Postives = 229/238 (96.22%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. ExPASy TrEMBL
Match: A0A6J1HSI5 (gamma-interferon-inducible lysosomal thiol reductase isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466215 PE=3 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 2.4e-112 Identity = 192/238 (80.67%), Postives = 211/238 (88.66%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. TAIR 10
Match: AT5G01580.1 (gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 256.9 bits (655), Expect = 1.6e-68 Identity = 110/218 (50.46%), Postives = 152/218 (69.72%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. TAIR 10
Match: AT1G07080.1 (Thioredoxin superfamily protein ) HSP 1 Score: 226.9 bits (577), Expect = 1.8e-59 Identity = 94/184 (51.09%), Postives = 135/184 (73.37%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. TAIR 10
Match: AT4G12890.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 169.5 bits (428), Expect = 3.3e-42 Identity = 77/188 (40.96%), Postives = 111/188 (59.04%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. TAIR 10
Match: AT4G12900.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 167.9 bits (424), Expect = 9.7e-42 Identity = 86/216 (39.81%), Postives = 122/216 (56.48%), Query Frame = 0
BLAST of CsaV3_4G026480 vs. TAIR 10
Match: AT4G12960.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35 Identity = 75/200 (37.50%), Postives = 109/200 (54.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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