CsaV3_4G007270 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G007270
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 4948328 .. 4948684 (-)
RNA-Seq ExpressionCsaV3_4G007270
SyntenyCsaV3_4G007270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTTGAAACGAAGTTCAAAATCCAGGTGGTGATGATGCTGTTGCAAATGATCCAAAAGTTTCACATAACACCCATGAGACAGGTTAAGTTCGATCAAGGTTCTATTAGTGAAGCAAACTTTATTTTGTACAGTGAGGTTAAGAAGGAAGGCACAATTCTAAGAAGTGTAGTTTGATTCAGTCAAAAGATCAAATACAAGGATCAAACCGATGCATGCTATCGAAGTGATGAAGGTAGTATGGATTTTTATACATTGCTTCGGGATAAGGGTGGTGGTCGAAGAGGAACCCTCGAGAACACCAGAGAAAGGAGGTTAAAAAGTTGGGTCGATCTCAACCATGACGATGACTGA

mRNA sequence

ATGTCTTTTGAAACGAAGTTCAAAATCCAGGTGGTGATGATGCTGTTGCAAATGATCCAAAAGTTTCACATAACACCCATGAGACAGATCAAATACAAGGATCAAACCGATGCATGCTATCGAAGTGATGAAGGTAGTATGGATTTTTATACATTGCTTCGGGATAAGGGTGGTGGTCGAAGAGGAACCCTCGAGAACACCAGAGAAAGGAGGTTAAAAAGTTGGGTCGATCTCAACCATGACGATGACTGA

Coding sequence (CDS)

ATGTCTTTTGAAACGAAGTTCAAAATCCAGGTGGTGATGATGCTGTTGCAAATGATCCAAAAGTTTCACATAACACCCATGAGACAGATCAAATACAAGGATCAAACCGATGCATGCTATCGAAGTGATGAAGGTAGTATGGATTTTTATACATTGCTTCGGGATAAGGGTGGTGGTCGAAGAGGAACCCTCGAGAACACCAGAGAAAGGAGGTTAAAAAGTTGGGTCGATCTCAACCATGACGATGACTGA

Protein sequence

MSFETKFKIQVVMMLLQMIQKFHITPMRQIKYKDQTDACYRSDEGSMDFYTLLRDKGGGRRGTLENTRERRLKSWVDLNHDDD*
Homology
[Close]
BLAST of CsaV3_4G007270 vs. NCBI nr
Match: KGN53484.1 (hypothetical protein Csa_014420 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 7.4e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MSFETKFKIQVVMMLLQMIQKFHITPMRQIKYKDQTDACYRSDEGSMDFYTLLRDKGGGR 60
          MSFETKFKIQVVMMLLQMIQKFHITPMRQIKYKDQTDACYRSDEGSMDFYTLLRDKGGGR
Sbjct: 1  MSFETKFKIQVVMMLLQMIQKFHITPMRQIKYKDQTDACYRSDEGSMDFYTLLRDKGGGR 60

Query: 61 RGTLENTRERRLKSWVDLNHDDD 84
          RGTLENTRERRLKSWVDLNHDDD
Sbjct: 61 RGTLENTRERRLKSWVDLNHDDD 83

[Close]
BLAST of CsaV3_4G007270 vs. ExPASy TrEMBL
Match: A0A0A0KXC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056720 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.6e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MSFETKFKIQVVMMLLQMIQKFHITPMRQIKYKDQTDACYRSDEGSMDFYTLLRDKGGGR 60
          MSFETKFKIQVVMMLLQMIQKFHITPMRQIKYKDQTDACYRSDEGSMDFYTLLRDKGGGR
Sbjct: 1  MSFETKFKIQVVMMLLQMIQKFHITPMRQIKYKDQTDACYRSDEGSMDFYTLLRDKGGGR 60

Query: 61 RGTLENTRERRLKSWVDLNHDDD 84
          RGTLENTRERRLKSWVDLNHDDD
Sbjct: 61 RGTLENTRERRLKSWVDLNHDDD 83

The following BLAST results are available for this feature:
BLAST of CsaV3_4G007270 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53484.17.4e-39100.00hypothetical protein Csa_014420 [Cucumis sativus][more]
BLAST of CsaV3_4G007270 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G007270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXC13.6e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G056720 PE=4 SV=1[more]
BLAST of CsaV3_4G007270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G007270.1CsaV3_4G007270.1mRNA