CsaV3_4G004580 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGTTTCTTTAGAAGCTTTGGCAATGGCGGGGATTGATTCCAATGAGTGGGCTATGGATGCTGAAGAATGGAAAACAAATACTCATCAAATGGAGAACGACGACATAATTCCACCGCATTTATTAGCCGACGAAGACGAAGAAAATATAGCAGCCAAGGAATTATGCATTTCCGGTCACCGAAAAGATGACGGACTGGTG ATGAGGGTTTCTTTAGAAGCTTTGGCAATGGCGGGGATTGATTCCAATGAGTGGGCTATGGATGCTGAAGAATGGAAAACAAATACTCATCAAATGGAGAACGACGACATAATTCCACCGCATTTATTAGCCGACGAAGACGAAGAAAATATAGCAGCCAAGGAATTATGCATTTCCGGTCACCGAAAAGATGACGGACTGGTG ATGAGGGTTTCTTTAGAAGCTTTGGCAATGGCGGGGATTGATTCCAATGAGTGGGCTATGGATGCTGAAGAATGGAAAACAAATACTCATCAAATGGAGAACGACGACATAATTCCACCGCATTTATTAGCCGACGAAGACGAAGAAAATATAGCAGCCAAGGAATTATGCATTTCCGGTCACCGAAAAGATGACGGACTGGTG MRVSLEALAMAGIDSNEWAMDAEEWKTNTHQMENDDIIPPHLLADEDEENIAAKELCISGHRKDDGLV Homology
BLAST of CsaV3_4G004580 vs. NCBI nr
Match: KAE8649147.1 (hypothetical protein Csa_014525, partial [Cucumis sativus]) HSP 1 Score: 142.1 bits (357), Expect = 1.7e-30 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of CsaV3_4G004580 vs. NCBI nr
Match: KAE8637184.1 (hypothetical protein CSA_023573, partial [Cucumis sativus] >KAE8637242.1 hypothetical protein CSA_023968, partial [Cucumis sativus]) HSP 1 Score: 131.7 bits (330), Expect = 2.4e-27 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of CsaV3_4G004580 vs. NCBI nr
Match: XP_022943015.1 (uncharacterized protein LOC111447880 [Cucurbita moschata]) HSP 1 Score: 75.1 bits (183), Expect = 2.6e-10 Identity = 45/71 (63.38%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of CsaV3_4G004580 vs. NCBI nr
Match: KAG7015383.1 (hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 70.9 bits (172), Expect = 4.9e-09 Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of CsaV3_4G004580 vs. NCBI nr
Match: KAG6577295.1 (hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 70.9 bits (172), Expect = 4.9e-09 Identity = 36/50 (72.00%), Postives = 43/50 (86.00%), Query Frame = 0
BLAST of CsaV3_4G004580 vs. ExPASy TrEMBL
Match: A0A0A0KU90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026820 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 8.4e-31 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of CsaV3_4G004580 vs. ExPASy TrEMBL
Match: A0A6J1FX98 (uncharacterized protein LOC111447880 OS=Cucurbita moschata OX=3662 GN=LOC111447880 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10 Identity = 45/71 (63.38%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of CsaV3_4G004580 vs. ExPASy TrEMBL
Match: A0A0A0KWE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026810 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.1e-09 Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0
BLAST of CsaV3_4G004580 vs. ExPASy TrEMBL
Match: A0A5D3CZU0 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00110 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.6e-08 Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of CsaV3_4G004580 vs. ExPASy TrEMBL
Match: A0A5A7TS68 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004640 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.6e-08 Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of CsaV3_4G004580 vs. TAIR 10
Match: AT2G22320.1 (unknown protein; Has 7 Blast hits to 7 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 7.8e-05 Identity = 20/45 (44.44%), Postives = 29/45 (64.44%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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