CsaV3_4G003760 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTACATCCTGAACCCGACCACCGCCACCACCGTCTCTGTCTCCCTCTCCTCTCTCCGTTTCGAATCCCTTCTCTCTCCCTTCCCTCTCTCTGCCACTTCGATCAAATTCCCTCCTGATTTTTTTTTTTCAGTAAGTCTCTGTTTTTCCCATCTTTTAGTGATGATGAGTTAATTAATTTGGAATTCCGGTTTTTCAACTCCACGGGGTTTGTGTATTTGCAATTGACATTTTCGTCGTCGTTTTGATTTTGGGTCTTTTTGGTTTGATGGTTTTTGGGATTTGGGAGAGTTTTTTTTATAAAAAAAGTGGGTAATTGTTGAATTGTTGTGTTCTCTCTTTGTTTGGGAGATTGCGGGGGAAAGAAATTTAGGGATGTTGTTTAAATGGAAGGAACATGTGTCTGTAGTTTGTTTCTTGAAATTAATTGTTGTCTCTCTGCTGCAAAACGTGCATGAGAATTGAATGAAACGAATGTTTGTTTTATGGACGTTCGAGAATTTAATTTAATTGTTTGAATCGTTTCTGGGTTTTGTGACTTGGGTCCTGTTGCTTTCCCTTTTCAAGTTACTTTTGTTTATGAAAATAGCATTGGACTTCTGTAGGATTTATTGTTTGTTGCCATTTATTGGAGGAATGAACTCATTAATCAAACAAGCAGAGATATTTTTTTGGCTCAACCATTTAGACAGGGCATGTACTCATCTAATTACCTTATTAGCTTCTGTTGTCTGGCTTCTCACCCTCGAGTGAACAGCATTTGCTTGTATACATGTTTTTTTTTTTTGTTACTTTTTTGTTTCCTGCAAGATCAATCTTCGTCTGTTCTTTTATTTTCATTTTGGTTATGGCATTTTCTTAAAAATGGTTTGATTGTTGATTGCAGTGGAGTTTGGGGTTGATGGTGATAGTGAGGTGGTGGGCAATTCGACTCTGGTGGAGGATAGCAAACCTCTTGATGAAAATGAAACAGGAGTAAGTTCTATTGAAAGGATTTTTGATCAGGACCAGGATGAGAAAATAATTCAGGATTCAACTGGAAGAAATGCAATTTTGGATTCAGTTCCTGGATTGCCCATAGTTCAAGCAGACGAGCCTTATGTTGGTCAGGAATTTGAAAATGAGGCGGCAGCGCATGCATTTTATAATTCTTATGCTACGCGTGTGGGATTTGTTATTCGTGTTAGCAAGCTCTCACGATCAAGACGTGATGGGACGGCTATTGGTCGTGCACTTGTTTGCAACAAAGAAGGGTACAGAATGCCGGATAAGCGGGAAAAGATTGTGAGGCAGAGGGCAGAAACGAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTAAATTCTGGGAAATGGGTTGTCACTAAATTTGTGAAAGAGCATACGCATCCTCTCTCACCTGGGAAAGCTCGAAGAGATTGCATATATGACCAATATCCTGTAAGTTCTTTCTTATACCAATCTTTGCATATTCAATTGGATGCCTTCTTTTCCTTATAATGACGTGCATTAGTGGTAAATTGAATTCTTTTGGAATGATATCATCTGGCTGTTTATTTTTAAGCTTTATTCAGTAACTTTTAAGTGAAAAAGGAAGTAGAGTCGTCAATGCAACAATTTAAATCCAGTTTTTTGTTTGTTGTAGTGTCTTTATTTGAGGCAGGTAGTAGACATCCTCTATCCTCCATCTTCAACTCCCCATTCTCCATAGGGATGTGGACTCAGATAAAGAAAAACTTAGTGTGTTGCATTTTATAAGATTTGAAGTATTTGATTAAATAGGTTTTGGAGAGGTAGAACTCTTAGTTCCAGAAATTGGTCTACCATAATGAATGAAAATTACACAAGTTCTTTAAGAAGGTTTTATAGAGTGCCTATTGTATGGATGATAGATCAATGGCACGGTTTTTTCCTTCCTTTTCTTTTTTTTTTAAAAAAATTGTGTTGTGCTTTTTATCCATGATATCCAATCAAACATGTAGAAGTTTAAAAATGTAGAATTTAGAAAGAACAAAAGTGTATTACTTGGACTGTTATTGGAATTTCCAAATCTGAGATTATTGGGCAAAAGCATATATCTTTTATGGGGTAGCTGACAGCTAGAGTCTAGCATCCAGAAGAAATGGGGGACGCAGTTGAGTGGACTCATTGTTACCTATTCTGGTTTACTCAAGGACCCTTGGCAAGATTTCACTGTCCAAATTTCAGAGAATTATTTTCTGGTTTGGTGTTTAGGTATCTTCTGCAAGCCTGCGAGTAGTTAGAGTTAGGAATTATGATTTGACTATGTTAGGTTATTAATGGTAAACAGAAACTCTCATGAACAGATGATAGAAAAGAGACGGAAACTCTCAAAGCTGATTAGTTCTACAATAATCTCCCCGATCAACAGGAATTGAAGAGACATCATTATGGCTATAAGAGATGATCTATCATTTTGATACCAAGAAAAAGCTTCCTAAAGAATAGTTTTTAAGACCCATCAAAGTTTCTATAAATCCCCCAGGAATGATTTTTTTTATATACAGGAAACGAACATTTCATTCATGAGATGAAAGAAAAATAAAAGAAAAAAAACATTCTCCAATTGGTCATAAAATTAGTTAAACGAAGTTACAATACGAGGAGTTTGATTTACACCAATTAAGAGAAAGGAAAGTAGTAGGAGTGGGATTTGTATATAAAAATGTTCCTTATTTGTAAAAACCTGAGGATTCTGTAAATCCCCTGGAATGATGTTATGCATTTTCCCAACTGTATTTCCTAAACGAAGCCTTCAAGGAATGAACCATTGGTGATTTGGAGGTTAATCTCCTCAAAGATTATCCAGTTTTTGTGTGGACAGTGGAGGGAATTTTAGTCTAGAACATTTAAACTATTTCCCTCCTTGGTCATTGCTTCTTGAGCCTCCCATTTGTGCATTACTGGAAAAGCATGTGCGTTTGTTAATCATATGTTTGTATATATTACTCTGAGGAATTGGGAGATAAGGGGAAATCCTTAAGTGGTTGTCGATGTCTCGTCTAGAAGGTTTACTAAGCTAGTGGCCATGGTTCATTCCTTAAGGAGAGACCTAGAATCTCCATTATTGAATTTGATCTTTGTCACAGTGTTGGGATTGAAAATTTAGAGATTGGATAGCTTTTGACGATTCTGACAGGGATAGGGTGCAGGTGGGGTTTGGCGTCATGTGTATTTTAGTATGTTCATCACCAAAAAGAAAAGGGAAAAAAAAATCTGCTTGGCATTTAGGTTGAAGTTGGCTTCTCAGGTGCTTGATTTGAAAAATGTAAAAGCAATTAGAATATTGTTTTTCCTTGTTTATTATACATGGAATGACTGATGATAACTATTACTTCTCTGATTGAATGATATTTTTTAGTCAAAGTGTACTGATGAAGTGGTAACAAATGTCTAATGTGGTTTCTATGTAAACTTTTATGGTATTGTAATAAATTATTTGATAAACTTAGCATTATGGGTTAGATTGCTCATTTATCACTTATGTACTAAAAGTATGGTTCATATCGTCTCTTTCCTCTTGGAACTGAGTTTTACACATTTGTTTCAATAATTCAATCTCAACAAATGGTTTTTAATAAAGAAAATGGTTGACAGCCATAACTAATTCTTTCACCTTTGCTTTTATAACAATGCCTTAAACAACGATCCCTTTGTTACTATAGCCTTGGTTTTATGATTTTATCCTTCATGATTGGAAGACACTGCTTCACTAGTTTTTCTTTGGGAGGATACCCTCAATCCCCGCTGCCCCTAGACTGTTTTTGTCCTCCTCTTTATGATTTGTTCCATACTTCTATTGTTTCATATTGAAAAAATAAAAATAAAAATTTACTGTTTTATTTGTTGAATGACTTGCCATAAAGATCACACTGGTCTCTGGATCTTATCTTTTCTGACTACTTCAGTAGCTTGTTTTATATGTGCCTGTCTCTTTGACCGTTGTGTACCTTTTTTGGGGGGGGATTTCTGTTGGTGCGTTTAACATGGCTAGAAACTGAGCTTGTGAGTAGTGATACTCTAGAGGAGAATGGAGCTTGCTTAATGTAACCAACTTCTTGCTCGGAATCGACTTCCCAGCTGAGGTCCTTGGCTTTGGTTTCTTCTTTTTAGCTTAATCTTTTGGCTCACAGTGAACATCACACTATAGGAAGTGAAGAGAGATTTGAAGTTGGAATACCCTAACTACTGAGCTGCTCGTGATGGCGCTTTTGATTTTTGTTATAAGTCATGCGCTTATAAAGATAAATGTTGTAATGCCTTGAGTTTGTTATCTCGTGCTTCAAACAACCAAGAGGTGCCTTTTGTCTCTAATAAAACTGTTCTCCTTTTGTCTTCTAGACATAGCTAACACTTTCCAAGCAAACCGCATAAATCTCTATGCCAGTCTTTTTTGCTTTATATTTTCTATTTATCTTTGGTAGTCCATTCTTGACAATTTGTTATTTTCTAACCATTTTCGCATAGGTAAGCAAAGCTTTTGAATCAGATTTGGATTTTCGTAGTCTCTTATATTGTAATTGTAAATGGCGTATACAACAGTGCATGCATTGTATTACTCTTTTAACTCGGCTTTTACCATTTTTGTGCTGCAGAATGAACACGATAAGATACGTGAATTGTCTCAGCAGCTTGCAATTGAGAAAAAGCGATCTGCAACTTATAAAAGGCATCTAGAAGTCATTTTTGAATACATCGAGGAGCATAACGATAGCTTGTCAAGAAAGATCCAACATATAGTAGACAACGTGAAGGAGTTGGAAAGTGTAGAACAGCAGAATCATAGATAGTATTGGGCTATACTTCTACATACTCCCAGTTTGAGATTCCAAAACGAAGATGATGGTATAGTTGCTGGATGAATGAAGAAAATTTTAGTTCAGAATTATTATGATATGTTCCAGCATTTAGATGTCAATTCAGTTTCACAAAAATGGAGTATACTTCCCATGATATTTCATTGCTTGTAAATCGCAATGTATGTCATGTTTTGTACAGCATTCAAACGATTTGTATCTTATCTTTCATTAGTCAGTTTTTTTTTACCTTATTAATTTATTTTCAAGTTATTGATGAACTCGTCTTTACAGACATCATAGATATTTGACCTTCGCATCCTTTCGATTTATCTTCAAAAGGAAATAAGACACAAGAAATGAAAA ATGGAGTTTGGGGTTGATGGTGATAGTGAGGTGGTGGGCAATTCGACTCTGGTGGAGGATAGCAAACCTCTTGATGAAAATGAAACAGGAGTAAGTTCTATTGAAAGGATTTTTGATCAGGACCAGGATGAGAAAATAATTCAGGATTCAACTGGAAGAAATGCAATTTTGGATTCAGTTCCTGGATTGCCCATAGTTCAAGCAGACGAGCCTTATGTTGGTCAGGAATTTGAAAATGAGGCGGCAGCGCATGCATTTTATAATTCTTATGCTACGCGTGTGGGATTTGTTATTCGTGTTAGCAAGCTCTCACGATCAAGACGTGATGGGACGGCTATTGGTCGTGCACTTGTTTGCAACAAAGAAGGGTACAGAATGCCGGATAAGCGGGAAAAGATTGTGAGGCAGAGGGCAGAAACGAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTAAATTCTGGGAAATGGGTTGTCACTAAATTTGTGAAAGAGCATACGCATCCTCTCTCACCTGGGAAAGCTCGAAGAGATTGCATATATGACCAATATCCTAATGAACACGATAAGATACGTGAATTGTCTCAGCAGCTTGCAATTGAGAAAAAGCGATCTGCAACTTATAAAAGGCATCTAGAAGTCATTTTTGAATACATCGAGGAGCATAACGATAGCTTGTCAAGAAAGATCCAACATATAGTAGACAACGTGAAGGAGTTGGAAAGTGTAGAACAGCAGAATCATAGATAG ATGGAGTTTGGGGTTGATGGTGATAGTGAGGTGGTGGGCAATTCGACTCTGGTGGAGGATAGCAAACCTCTTGATGAAAATGAAACAGGAGTAAGTTCTATTGAAAGGATTTTTGATCAGGACCAGGATGAGAAAATAATTCAGGATTCAACTGGAAGAAATGCAATTTTGGATTCAGTTCCTGGATTGCCCATAGTTCAAGCAGACGAGCCTTATGTTGGTCAGGAATTTGAAAATGAGGCGGCAGCGCATGCATTTTATAATTCTTATGCTACGCGTGTGGGATTTGTTATTCGTGTTAGCAAGCTCTCACGATCAAGACGTGATGGGACGGCTATTGGTCGTGCACTTGTTTGCAACAAAGAAGGGTACAGAATGCCGGATAAGCGGGAAAAGATTGTGAGGCAGAGGGCAGAAACGAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTAAATTCTGGGAAATGGGTTGTCACTAAATTTGTGAAAGAGCATACGCATCCTCTCTCACCTGGGAAAGCTCGAAGAGATTGCATATATGACCAATATCCTAATGAACACGATAAGATACGTGAATTGTCTCAGCAGCTTGCAATTGAGAAAAAGCGATCTGCAACTTATAAAAGGCATCTAGAAGTCATTTTTGAATACATCGAGGAGCATAACGATAGCTTGTCAAGAAAGATCCAACATATAGTAGACAACGTGAAGGAGTTGGAAAGTGTAGAACAGCAGAATCATAGATAG MEFGVDGDSEVVGNSTLVEDSKPLDENETGVSSIERIFDQDQDEKIIQDSTGRNAILDSVPGLPIVQADEPYVGQEFENEAAAHAFYNSYATRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLSPGKARRDCIYDQYPNEHDKIRELSQQLAIEKKRSATYKRHLEVIFEYIEEHNDSLSRKIQHIVDNVKELESVEQQNHR* Homology
BLAST of CsaV3_4G003760 vs. NCBI nr
Match: XP_004152087.1 (protein FAR1-RELATED SEQUENCE 6 [Cucumis sativus] >KAE8649125.1 hypothetical protein Csa_015283 [Cucumis sativus]) HSP 1 Score: 492.3 bits (1266), Expect = 2.5e-135 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. NCBI nr
Match: XP_008453933.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 6 [Cucumis melo]) HSP 1 Score: 491.9 bits (1265), Expect = 3.3e-135 Identity = 249/250 (99.60%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. NCBI nr
Match: XP_038876355.1 (protein FAR1-RELATED SEQUENCE 6-like [Benincasa hispida]) HSP 1 Score: 483.0 bits (1242), Expect = 1.5e-132 Identity = 242/250 (96.80%), Postives = 248/250 (99.20%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. NCBI nr
Match: XP_022138245.1 (protein FAR1-RELATED SEQUENCE 6 [Momordica charantia]) HSP 1 Score: 481.1 bits (1237), Expect = 5.8e-132 Identity = 239/250 (95.60%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. NCBI nr
Match: KAG7029074.1 (Protein FAR1-RELATED SEQUENCE 5, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 475.7 bits (1223), Expect = 2.4e-130 Identity = 235/250 (94.00%), Postives = 247/250 (98.80%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.8e-25 Identity = 63/108 (58.33%), Postives = 74/108 (68.52%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. ExPASy Swiss-Prot
Match: Q9M8J3 (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.4e-18 Identity = 46/102 (45.10%), Postives = 61/102 (59.80%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. ExPASy Swiss-Prot
Match: Q3E7I5 (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.2e-16 Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. ExPASy Swiss-Prot
Match: Q9SSQ4 (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=FRS6 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.5e-13 Identity = 51/152 (33.55%), Postives = 78/152 (51.32%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. ExPASy Swiss-Prot
Match: Q9S793 (Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana OX=3702 GN=FRS8 PE=2 SV=2) HSP 1 Score: 75.9 bits (185), Expect = 7.4e-13 Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. ExPASy TrEMBL
Match: A0A1S3BY81 (protein FAR1-RELATED SEQUENCE 6 OS=Cucumis melo OX=3656 GN=LOC103494508 PE=4 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 1.6e-135 Identity = 249/250 (99.60%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. ExPASy TrEMBL
Match: A0A0A0KZ37 (FAR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G017090 PE=4 SV=1) HSP 1 Score: 491.1 bits (1263), Expect = 2.7e-135 Identity = 249/250 (99.60%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. ExPASy TrEMBL
Match: A0A6J1C8X6 (protein FAR1-RELATED SEQUENCE 6 OS=Momordica charantia OX=3673 GN=LOC111009466 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 2.8e-132 Identity = 239/250 (95.60%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. ExPASy TrEMBL
Match: A0A6J1EXF3 (protein FAR1-RELATED SEQUENCE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111439106 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 2.6e-130 Identity = 235/250 (94.00%), Postives = 246/250 (98.40%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. ExPASy TrEMBL
Match: A0A6J1GW29 (protein FAR1-RELATED SEQUENCE 6-like OS=Cucurbita moschata OX=3662 GN=LOC111457418 PE=4 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 5.9e-130 Identity = 238/250 (95.20%), Postives = 248/250 (99.20%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. TAIR 10
Match: AT3G59470.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 307.0 bits (785), Expect = 1.4e-83 Identity = 156/235 (66.38%), Postives = 189/235 (80.43%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. TAIR 10
Match: AT3G59470.2 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 307.0 bits (785), Expect = 1.4e-83 Identity = 156/235 (66.38%), Postives = 189/235 (80.43%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. TAIR 10
Match: AT3G07500.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 158.7 bits (400), Expect = 6.2e-39 Identity = 87/207 (42.03%), Postives = 137/207 (66.18%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. TAIR 10
Match: AT2G43280.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 137.1 bits (344), Expect = 1.9e-32 Identity = 79/183 (43.17%), Postives = 115/183 (62.84%), Query Frame = 0
BLAST of CsaV3_4G003760 vs. TAIR 10
Match: AT4G12850.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-29 Identity = 68/177 (38.42%), Postives = 108/177 (61.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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