CsaV3_4G002770 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G002770
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 1710295 .. 1710943 (+)
RNA-Seq ExpressionCsaV3_4G002770
SyntenyCsaV3_4G002770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAAACACACTCAAACAAGAATACCCTTCAATAAACAAAGAAAATTCCATTCTAACACCGATAAAAGAACCCCAAATTACCAAACAAATAAAAACAACCTAAAAACACCATAATGCAAAACAAAAACACACACACACACACACACACACACAAAAAAAAAACTTCACATAGCATTAATATTAATCAAAACCCAAATCAAGTTAAACAGGCAGTACCCTCACTATGGACGCTCAGCAGCTGAATTCCAAATACAGTATCCATGAACAGAATCAGTCCCTACACAAATATCGGCACAACGAATACTCCTCCCTTCACCGAAACCTGAAAAGAAGAAATACTCCTCAACGAAACCTTAAAACCAATCGAATGCTTCTAGAGTAGTTTGAAACAATCGAGGATCCCTCTAGCTTCTGACACAGATCAAAGTCAAGAGAAATTGTAGCAGGATTGTTGAAGAGAAATTGGTGTCCAAGTGAAGAGAAGGGAAAGTCGATTGTCGATTCGTTGAGAGTAGCGTTTGTATGATCGAAGTTGATAAGGAATTTGATGGAGCGGAGAGAAATAGTAGTGCATGGAGGATTTGGGTAGGCCAAAAAAATGGTGTTCTTCAAAGGTGCTTTGATGGGGGATTACGCCTGGACTGTATGA

mRNA sequence

ATGGACGCTCAGCAGCTGAATTCCAAATACAGTATCCATGAACAGAATCAGTCCCTACACAAATATCGGCACAACGAATACTCCTCCCTTCACCGAAACCTGAAAAGAAGAAATACTCCTCAACGAAACCTTAAAACCAATCGAATGCTTCTAGAATCAAAGTCAAGAGAAATTGTAGCAGGATTGTTGAAGAGAAATTGGTGTCCAAGTGAAGAGAAGGGAAAGTCGATTGTCGATTCGTTGAGAGCCAAAAAAATGGTGTTCTTCAAAGGTGCTTTGATGGGGGATTACGCCTGGACTGTATGA

Coding sequence (CDS)

ATGGACGCTCAGCAGCTGAATTCCAAATACAGTATCCATGAACAGAATCAGTCCCTACACAAATATCGGCACAACGAATACTCCTCCCTTCACCGAAACCTGAAAAGAAGAAATACTCCTCAACGAAACCTTAAAACCAATCGAATGCTTCTAGAATCAAAGTCAAGAGAAATTGTAGCAGGATTGTTGAAGAGAAATTGGTGTCCAAGTGAAGAGAAGGGAAAGTCGATTGTCGATTCGTTGAGAGCCAAAAAAATGGTGTTCTTCAAAGGTGCTTTGATGGGGGATTACGCCTGGACTGTATGA

Protein sequence

MDAQQLNSKYSIHEQNQSLHKYRHNEYSSLHRNLKRRNTPQRNLKTNRMLLESKSREIVAGLLKRNWCPSEEKGKSIVDSLRAKKMVFFKGALMGDYAWTV*
Homology
[Close]
BLAST of CsaV3_4G002770 vs. NCBI nr
Match: KGN53018.1 (hypothetical protein Csa_015274 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 1.1e-47
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MDAQQLNSKYSIHEQNQSLHKYRHNEYSSLHRNLKRRNTPQRNLKTNRMLLESKSREIVA 60
           MDAQQLNSKYSIHEQNQSLHKYRHNEYSSLHRNLKRRNTPQRNLKTNRMLLESKSREIVA
Sbjct: 1   MDAQQLNSKYSIHEQNQSLHKYRHNEYSSLHRNLKRRNTPQRNLKTNRMLLESKSREIVA 60

Query: 61  GLLKRNWCPSEEKGKSIVDSLRAKKMVFFKGALMGDYAWTV 102
           GLLKRNWCPSEEKGKSIVDSLRAKKMVFFKGALMGDYAWTV
Sbjct: 61  GLLKRNWCPSEEKGKSIVDSLRAKKMVFFKGALMGDYAWTV 101

[Close]
BLAST of CsaV3_4G002770 vs. ExPASy TrEMBL
Match: A0A0A0KU33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011650 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.1e-48
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MDAQQLNSKYSIHEQNQSLHKYRHNEYSSLHRNLKRRNTPQRNLKTNRMLLESKSREIVA 60
           MDAQQLNSKYSIHEQNQSLHKYRHNEYSSLHRNLKRRNTPQRNLKTNRMLLESKSREIVA
Sbjct: 1   MDAQQLNSKYSIHEQNQSLHKYRHNEYSSLHRNLKRRNTPQRNLKTNRMLLESKSREIVA 60

Query: 61  GLLKRNWCPSEEKGKSIVDSLRAKKMVFFKGALMGDYAWTV 102
           GLLKRNWCPSEEKGKSIVDSLRAKKMVFFKGALMGDYAWTV
Sbjct: 61  GLLKRNWCPSEEKGKSIVDSLRAKKMVFFKGALMGDYAWTV 101

The following BLAST results are available for this feature:
BLAST of CsaV3_4G002770 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53018.11.1e-47100.00hypothetical protein Csa_015274 [Cucumis sativus][more]
BLAST of CsaV3_4G002770 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G002770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KU335.1e-48100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011650 PE=4 SV=1[more]
BLAST of CsaV3_4G002770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G002770.1CsaV3_4G002770.1mRNA