CsaV3_3G034080 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAAGGAAAGCGAGCAAACGAGTCAGCTTCAGTCCTGATGTGAATGATAAGCCAACGGTTGTGCTCAAACACGGTGGCGGTGGTGATGGCGGAGCCGGAATGTGGAGCTTCGGCCTTAGCAGAGAAACAAGGTACTTGCCGGTGAGGTTTCTACAGAGCCTTAAGAACAGAGTAAGTGAAGCAATTCGCTTTGTCTCAACAAGAAAGTCTTCACGAAAGGTTTCTTCAGCCTCCACTTTTACAAGGTCAAGATCGGTCTCGGATTCCATGGAATCGCATCGAGCTGAAGCCATTGAAGATTGTATCGAGTTCTTAAACCACTCTTCATCTTTGTCCAGATCAAATTCAGTCTCTGGAAGTACTTACTGA ATGTCAAGGAAAGCGAGCAAACGAGTCAGCTTCAGTCCTGATGTGAATGATAAGCCAACGGTTGTGCTCAAACACGGTGGCGGTGGTGATGGCGGAGCCGGAATGTGGAGCTTCGGCCTTAGCAGAGAAACAAGGTACTTGCCGGTGAGGTTTCTACAGAGCCTTAAGAACAGAGTAAGTGAAGCAATTCGCTTTGTCTCAACAAGAAAGTCTTCACGAAAGGTTTCTTCAGCCTCCACTTTTACAAGGTCAAGATCGGTCTCGGATTCCATGGAATCGCATCGAGCTGAAGCCATTGAAGATTGTATCGAGTTCTTAAACCACTCTTCATCTTTGTCCAGATCAAATTCAGTCTCTGGAAGTACTTACTGA ATGTCAAGGAAAGCGAGCAAACGAGTCAGCTTCAGTCCTGATGTGAATGATAAGCCAACGGTTGTGCTCAAACACGGTGGCGGTGGTGATGGCGGAGCCGGAATGTGGAGCTTCGGCCTTAGCAGAGAAACAAGGTACTTGCCGGTGAGGTTTCTACAGAGCCTTAAGAACAGAGTAAGTGAAGCAATTCGCTTTGTCTCAACAAGAAAGTCTTCACGAAAGGTTTCTTCAGCCTCCACTTTTACAAGGTCAAGATCGGTCTCGGATTCCATGGAATCGCATCGAGCTGAAGCCATTGAAGATTGTATCGAGTTCTTAAACCACTCTTCATCTTTGTCCAGATCAAATTCAGTCTCTGGAAGTACTTACTGA MSRKASKRVSFSPDVNDKPTVVLKHGGGGDGGAGMWSFGLSRETRYLPVRFLQSLKNRVSEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMESHRAEAIEDCIEFLNHSSSLSRSNSVSGSTY* Homology
BLAST of CsaV3_3G034080 vs. NCBI nr
Match: XP_004137733.1 (josephin-like protein [Cucumis sativus] >KGN58786.1 hypothetical protein Csa_001490 [Cucumis sativus]) HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. NCBI nr
Match: XP_008442460.1 (PREDICTED: josephin-like protein [Cucumis melo] >KAA0044156.1 josephin-like protein [Cucumis melo var. makuwa] >TYK24979.1 josephin-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 226.9 bits (577), Expect = 9.8e-56 Identity = 120/123 (97.56%), Postives = 121/123 (98.37%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. NCBI nr
Match: XP_038903233.1 (josephin-like protein [Benincasa hispida]) HSP 1 Score: 219.9 bits (559), Expect = 1.2e-53 Identity = 118/123 (95.93%), Postives = 121/123 (98.37%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. NCBI nr
Match: XP_022145644.1 (josephin-like protein [Momordica charantia]) HSP 1 Score: 212.2 bits (539), Expect = 2.5e-51 Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. NCBI nr
Match: KAG6580487.1 (hypothetical protein SDJN03_20489, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 207.2 bits (526), Expect = 8.0e-50 Identity = 114/125 (91.20%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. ExPASy Swiss-Prot
Match: O82391 (Josephin-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g29640 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.3e-04 Identity = 32/89 (35.96%), Postives = 45/89 (50.56%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. ExPASy TrEMBL
Match: A0A0A0LFD2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732440 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 5.1e-58 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. ExPASy TrEMBL
Match: A0A5D3DNT5 (Josephin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00960 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 4.7e-56 Identity = 120/123 (97.56%), Postives = 121/123 (98.37%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. ExPASy TrEMBL
Match: A0A1S3B5Q5 (josephin-like protein OS=Cucumis melo OX=3656 GN=LOC103486317 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 4.7e-56 Identity = 120/123 (97.56%), Postives = 121/123 (98.37%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. ExPASy TrEMBL
Match: A0A6J1CVV1 (josephin-like protein OS=Momordica charantia OX=3673 GN=LOC111015044 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51 Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. ExPASy TrEMBL
Match: A0A6J1I1K7 (uncharacterized protein LOC111470059 OS=Cucurbita maxima OX=3661 GN=LOC111470059 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 8.1e-48 Identity = 109/123 (88.62%), Postives = 115/123 (93.50%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. TAIR 10
Match: AT5G01225.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09032.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 79.7 bits (195), Expect = 1.8e-15 Identity = 62/132 (46.97%), Postives = 80/132 (60.61%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. TAIR 10
Match: AT3G09032.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01225.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 1.9e-12 Identity = 62/147 (42.18%), Postives = 80/147 (54.42%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related ) HSP 1 Score: 54.3 bits (129), Expect = 8.1e-08 Identity = 39/110 (35.45%), Postives = 58/110 (52.73%), Query Frame = 0
BLAST of CsaV3_3G034080 vs. TAIR 10
Match: AT2G29640.1 (JOSEPHIN-like protein ) HSP 1 Score: 45.4 bits (106), Expect = 3.8e-05 Identity = 32/89 (35.96%), Postives = 45/89 (50.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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