CsaV3_3G033150 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATGAAGGGTAAATTATGGGAATCCGAAAAGTAAGTTATAATAAAAGGCGAAGGGGGGAAGGGGGTATGGGTCCAGTATTGTGTGGAGTGAAGTGAAGACTCCAACTACCACCAACTCCTTTTGTCCGGGTTAGCGTCATAAATGCATGGAGTGTATGTGTATGATGAATGGGCTATATAAACACGGCAACCAGAAGGGGTTTAATCCACAGAGCGAGTGAGAGAGAGGAAGATCAGAAAAGTAAACAATTAGATTTGTGGAGGGAAGAATCTGATTAAAGCGTAAGAAAGAGAGATGGAAATGAAGTTGAAGGGTTTGATGATTGTGGGGATTGTGGGGATTGTGATGATGTGTATGGTAGTGCAGGGTGAAGCGGCGGGTATGACGTGCGGGAAAGTGGCTTCATCAGTGTCGGGATGCATCGGTTATTTGAGAAGCGCACAAGGACAGGTTCCACAAGTATGTTGTAATGGGATTAGGTCCCTCAACAGCCAAGCCTCCACCACTGTCGATCGCCGCATAGCTTGCAACTGCTTGAAGGCTGCTGCAGGGTCCATCGAGGGCATCAACTATGGCGCTGCCGCTTCCCTTCCCAGCAAGTGTGGTGTCTCTGTTCCTTACAAGATCAGCCCCAGCACCGACTGCGCCAAGTATCTACCTATCTATCTATTTCTAATTCTTTTCTATTATATCTTCTAACTAATTCCCTTCTTGATTCTGTTTCTAATTTTAATTTGAATTTGTTTGGTTGCAGGGTGAACTAAATGAATGGTAATCGTGTAATCATCCTCCACCGCACCCATCTACTGCCTCATTATTATGATTATAGTTAATTATGATTATTATATTAGTGGTCTCCATGGGTAGCTTAATTAGCTTAGATTTGAATCTACCTAAATACCAATATAATAAACAGCATGGGATACTTTGTTGTTTGATATCCTATGCTTCTTCTTTTTTCTTCTACTACGTCTACTGTGTTGTGTGTATGAGTATGAGATTCCAATGATTTATATCATTGCGAATTCCAAATTATCAATTATCAATTTAATAAAAAAAAATTCCCTCATTTTCTACCTACTAA ATGGAAATGAAGTTGAAGGGTTTGATGATTGTGGGGATTGTGGGGATTGTGATGATGTGTATGGTAGTGCAGGGTGAAGCGGCGGGTATGACGTGCGGGAAAGTGGCTTCATCAGTGTCGGGATGCATCGGTTATTTGAGAAGCGCACAAGGACAGGTTCCACAAGTATGTTGTAATGGGATTAGGTCCCTCAACAGCCAAGCCTCCACCACTGTCGATCGCCGCATAGCTTGCAACTGCTTGAAGGCTGCTGCAGGGTCCATCGAGGGCATCAACTATGGCGCTGCCGCTTCCCTTCCCAGCAAGTGTGGTGTCTCTGTTCCTTACAAGATCAGCCCCAGCACCGACTGCGCCAAGGTGAACTAA ATGGAAATGAAGTTGAAGGGTTTGATGATTGTGGGGATTGTGGGGATTGTGATGATGTGTATGGTAGTGCAGGGTGAAGCGGCGGGTATGACGTGCGGGAAAGTGGCTTCATCAGTGTCGGGATGCATCGGTTATTTGAGAAGCGCACAAGGACAGGTTCCACAAGTATGTTGTAATGGGATTAGGTCCCTCAACAGCCAAGCCTCCACCACTGTCGATCGCCGCATAGCTTGCAACTGCTTGAAGGCTGCTGCAGGGTCCATCGAGGGCATCAACTATGGCGCTGCCGCTTCCCTTCCCAGCAAGTGTGGTGTCTCTGTTCCTTACAAGATCAGCCCCAGCACCGACTGCGCCAAGGTGAACTAA MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKVN* Homology
BLAST of CsaV3_3G033150 vs. NCBI nr
Match: XP_011651835.1 (non-specific lipid-transfer protein 1 [Cucumis sativus] >KGN58696.1 hypothetical protein Csa_001468 [Cucumis sativus]) HSP 1 Score: 235.0 bits (598), Expect = 3.5e-58 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. NCBI nr
Match: XP_008442324.1 (PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo] >TYK24911.1 non-specific lipid-transfer protein 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 158.3 bits (399), Expect = 4.2e-35 Identity = 85/121 (70.25%), Postives = 96/121 (79.34%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. NCBI nr
Match: XP_022935125.1 (non-specific lipid-transfer protein 1-like [Cucurbita moschata]) HSP 1 Score: 154.5 bits (389), Expect = 6.1e-34 Identity = 80/109 (73.39%), Postives = 92/109 (84.40%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. NCBI nr
Match: XP_022982607.1 (non-specific lipid-transfer protein 1-like [Cucurbita maxima]) HSP 1 Score: 152.1 bits (383), Expect = 3.0e-33 Identity = 78/109 (71.56%), Postives = 92/109 (84.40%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. NCBI nr
Match: XP_023528122.1 (non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 151.0 bits (380), Expect = 6.7e-33 Identity = 79/109 (72.48%), Postives = 91/109 (83.49%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. ExPASy Swiss-Prot
Match: P85894 (Non-specific lipid-transfer protein 1 OS=Morus nigra OX=85232 PE=1 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 4.4e-27 Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. ExPASy Swiss-Prot
Match: Q9M5X7 (Non-specific lipid-transfer protein OS=Malus domestica OX=3750 GN=MALD3 PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.3e-26 Identity = 63/105 (60.00%), Postives = 76/105 (72.38%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. ExPASy Swiss-Prot
Match: Q7XJ39 (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-A PE=3 SV=2) HSP 1 Score: 120.2 bits (300), Expect = 1.7e-26 Identity = 62/114 (54.39%), Postives = 78/114 (68.42%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. ExPASy Swiss-Prot
Match: A2ZAT0 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP2-A PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.7e-26 Identity = 62/114 (54.39%), Postives = 78/114 (68.42%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. ExPASy Swiss-Prot
Match: Q2QYL2 (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-B PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.2e-26 Identity = 58/94 (61.70%), Postives = 70/94 (74.47%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. ExPASy TrEMBL
Match: A0A0A0LF44 (Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_3G728130 PE=3 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. ExPASy TrEMBL
Match: A0A5D3DMS3 (Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00250 PE=3 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.0e-35 Identity = 85/121 (70.25%), Postives = 96/121 (79.34%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. ExPASy TrEMBL
Match: A0A1S3B5F4 (Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103486230 PE=3 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.0e-35 Identity = 85/121 (70.25%), Postives = 96/121 (79.34%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. ExPASy TrEMBL
Match: A0A6J1F9Q5 (Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC111442087 PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.9e-34 Identity = 80/109 (73.39%), Postives = 92/109 (84.40%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. ExPASy TrEMBL
Match: A0A6J1IX25 (Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111481432 PE=3 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.5e-33 Identity = 78/109 (71.56%), Postives = 92/109 (84.40%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. TAIR 10
Match: AT5G59310.1 (lipid transfer protein 4 ) HSP 1 Score: 99.8 bits (247), Expect = 1.7e-21 Identity = 53/104 (50.96%), Postives = 69/104 (66.35%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. TAIR 10
Match: AT2G38540.1 (lipid transfer protein 1 ) HSP 1 Score: 99.0 bits (245), Expect = 2.8e-21 Identity = 50/115 (43.48%), Postives = 78/115 (67.83%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. TAIR 10
Match: AT5G59320.1 (lipid transfer protein 3 ) HSP 1 Score: 95.9 bits (237), Expect = 2.4e-20 Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. TAIR 10
Match: AT2G38530.1 (lipid transfer protein 2 ) HSP 1 Score: 89.4 bits (220), Expect = 2.2e-18 Identity = 51/115 (44.35%), Postives = 75/115 (65.22%), Query Frame = 0
BLAST of CsaV3_3G033150 vs. TAIR 10
Match: AT3G08770.1 (lipid transfer protein 6 ) HSP 1 Score: 84.7 bits (208), Expect = 5.5e-17 Identity = 47/110 (42.73%), Postives = 69/110 (62.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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