CsaV3_3G033150 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G033150
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Non-specific lipid-transfer protein
Location	chr3: 28589646 .. 28590730 (-)
RNA-Seq Expression	CsaV3_3G033150
Synteny	CsaV3_3G033150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGAAGGGTAAATTATGGGAATCCGAAAAGTAAGTTATAATAAAAGGCGAAGGGGGGAAGGGGGTATGGGTCCAGTATTGTGTGGAGTGAAGTGAAGACTCCAACTACCACCAACTCCTTTTGTCCGGGTTAGCGTCATAAATGCATGGAGTGTATGTGTATGATGAATGGGCTATATAAACACGGCAACCAGAAGGGGTTTAATCCACAGAGCGAGTGAGAGAGAGGAAGATCAGAAAAGTAAACAATTAGATTTGTGGAGGGAAGAATCTGATTAAAGCGTAAGAAAGAGAGATGGAAATGAAGTTGAAGGGTTTGATGATTGTGGGGATTGTGGGGATTGTGATGATGTGTATGGTAGTGCAGGGTGAAGCGGCGGGTATGACGTGCGGGAAAGTGGCTTCATCAGTGTCGGGATGCATCGGTTATTTGAGAAGCGCACAAGGACAGGTTCCACAAGTATGTTGTAATGGGATTAGGTCCCTCAACAGCCAAGCCTCCACCACTGTCGATCGCCGCATAGCTTGCAACTGCTTGAAGGCTGCTGCAGGGTCCATCGAGGGCATCAACTATGGCGCTGCCGCTTCCCTTCCCAGCAAGTGTGGTGTCTCTGTTCCTTACAAGATCAGCCCCAGCACCGACTGCGCCAAGTATCTACCTATCTATCTATTTCTAATTCTTTTCTATTATATCTTCTAACTAATTCCCTTCTTGATTCTGTTTCTAATTTTAATTTGAATTTGTTTGGTTGCAGGGTGAACTAAATGAATGGTAATCGTGTAATCATCCTCCACCGCACCCATCTACTGCCTCATTATTATGATTATAGTTAATTATGATTATTATATTAGTGGTCTCCATGGGTAGCTTAATTAGCTTAGATTTGAATCTACCTAAATACCAATATAATAAACAGCATGGGATACTTTGTTGTTTGATATCCTATGCTTCTTCTTTTTTCTTCTACTACGTCTACTGTGTTGTGTGTATGAGTATGAGATTCCAATGATTTATATCATTGCGAATTCCAAATTATCAATTATCAATTTAATAAAAAAAAATTCCCTCATTTTCTACCTACTAA

mRNA sequence

ATGGAAATGAAGTTGAAGGGTTTGATGATTGTGGGGATTGTGGGGATTGTGATGATGTGTATGGTAGTGCAGGGTGAAGCGGCGGGTATGACGTGCGGGAAAGTGGCTTCATCAGTGTCGGGATGCATCGGTTATTTGAGAAGCGCACAAGGACAGGTTCCACAAGTATGTTGTAATGGGATTAGGTCCCTCAACAGCCAAGCCTCCACCACTGTCGATCGCCGCATAGCTTGCAACTGCTTGAAGGCTGCTGCAGGGTCCATCGAGGGCATCAACTATGGCGCTGCCGCTTCCCTTCCCAGCAAGTGTGGTGTCTCTGTTCCTTACAAGATCAGCCCCAGCACCGACTGCGCCAAGGTGAACTAA

Coding sequence (CDS)

ATGGAAATGAAGTTGAAGGGTTTGATGATTGTGGGGATTGTGGGGATTGTGATGATGTGTATGGTAGTGCAGGGTGAAGCGGCGGGTATGACGTGCGGGAAAGTGGCTTCATCAGTGTCGGGATGCATCGGTTATTTGAGAAGCGCACAAGGACAGGTTCCACAAGTATGTTGTAATGGGATTAGGTCCCTCAACAGCCAAGCCTCCACCACTGTCGATCGCCGCATAGCTTGCAACTGCTTGAAGGCTGCTGCAGGGTCCATCGAGGGCATCAACTATGGCGCTGCCGCTTCCCTTCCCAGCAAGTGTGGTGTCTCTGTTCCTTACAAGATCAGCCCCAGCACCGACTGCGCCAAGGTGAACTAA

Protein sequence

MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKVN*

Homology

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BLAST of CsaV3_3G033150 vs. NCBI nr
Match: XP_011651835.1 (non-specific lipid-transfer protein 1 [Cucumis sativus] >KGN58696.1 hypothetical protein Csa_001468 [Cucumis sativus])

HSP 1 Score: 235.0 bits (598), Expect = 3.5e-58
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60
           MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG
Sbjct: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60

Query: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 120
           IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV
Sbjct: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 120

Query: 121 N 122
           N
Sbjct: 121 N 121

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BLAST of CsaV3_3G033150 vs. NCBI nr
Match: XP_008442324.1 (PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo] >TYK24911.1 non-specific lipid-transfer protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 4.2e-35
Identity = 85/121 (70.25%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60
           MEMKLKGLM   IVGIVMMCMVV GEAA +TCG VA+++  CI YLRS    VP  CC+G
Sbjct: 1   MEMKLKGLM---IVGIVMMCMVVLGEAA-VTCGSVATAMGPCIPYLRSPSASVPAGCCSG 60

Query: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 120
           IRSLN QA+TT DRR ACNCLK+AA SI GINY AAA LP KCGVS+ Y ISP+TDC++V
Sbjct: 61  IRSLNGQAATTADRRTACNCLKSAAKSISGINYKAAAGLPGKCGVSISYPISPNTDCSRV 117

Query: 121 N 122
           N
Sbjct: 121 N 117

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BLAST of CsaV3_3G033150 vs. NCBI nr
Match: XP_022935125.1 (non-specific lipid-transfer protein 1-like [Cucurbita moschata])

HSP 1 Score: 154.5 bits (389), Expect = 6.1e-34
Identity = 80/109 (73.39%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 13  IVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTV 72
           IVG+V+MCMVV GEAA ++CG VA SVS CI YL++    VP  CCNGIRSLNSQAST+V
Sbjct: 10  IVGVVLMCMVV-GEAA-ISCGTVARSVSPCISYLKNPSSGVPAACCNGIRSLNSQASTSV 69

Query: 73  DRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKVN 122
           DRR AC CLK+AA SI GIN+ AA+SLPSKCGVS+PYKISPSTDC+KVN
Sbjct: 70  DRRTACTCLKSAANSISGINFNAASSLPSKCGVSIPYKISPSTDCSKVN 116

[Close]

BLAST of CsaV3_3G033150 vs. NCBI nr
Match: XP_022982607.1 (non-specific lipid-transfer protein 1-like [Cucurbita maxima])

HSP 1 Score: 152.1 bits (383), Expect = 3.0e-33
Identity = 78/109 (71.56%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 13  IVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTV 72
           +VG+V+MCMVV GEAA ++CG VASSV+ CI YLR+    +P  CC+GIRSLNSQAST+ 
Sbjct: 10  VVGVVLMCMVV-GEAA-ISCGTVASSVAPCIPYLRNPSTGLPAACCSGIRSLNSQASTSA 69

Query: 73  DRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKVN 122
           DRR ACNCLK+AA S+ GINY AA+SLPSKCGVS+PYKISPSTDC KVN
Sbjct: 70  DRRTACNCLKSAANSVSGINYNAASSLPSKCGVSIPYKISPSTDCNKVN 116

[Close]

BLAST of CsaV3_3G033150 vs. NCBI nr
Match: XP_023528122.1 (non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.0 bits (380), Expect = 6.7e-33
Identity = 79/109 (72.48%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 13  IVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTV 72
           IVG+V+MCMVV GEAA +TCG VASSV+ CI YL++    VP  CCNGIRSLNSQAST+V
Sbjct: 10  IVGVVLMCMVV-GEAA-ITCGAVASSVAPCIPYLKNPSSGVPAACCNGIRSLNSQASTSV 69

Query: 73  DRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKVN 122
           DRR AC CLK+AA SI GIN+ AA+SLPS+CGV +PYKISPSTDC KVN
Sbjct: 70  DRRTACTCLKSAASSIPGINFNAASSLPSQCGVRIPYKISPSTDCNKVN 116

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BLAST of CsaV3_3G033150 vs. ExPASy Swiss-Prot
Match: P85894 (Non-specific lipid-transfer protein 1 OS=Morus nigra OX=85232 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.4e-27
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 0


Query: 30  MTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTVDRRIACNCLKAAAGSIE 89
           +TCG+V+SS++ CI YLR A G VP  CCNG+RSLN+ A TT DR+ ACNCLK+A  SI+
Sbjct: 1   ITCGQVSSSLAPCINYLR-AGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIK 60

Query: 90  GINYGAAASLPSKCGVSVPYKISPSTDCAKV 121
           G+N   AA LP KCGVSVPYKISPSTDC  V
Sbjct: 61  GLNLNLAAGLPGKCGVSVPYKISPSTDCKSV 90

[Close]

BLAST of CsaV3_3G033150 vs. ExPASy Swiss-Prot
Match: Q9M5X7 (Non-specific lipid-transfer protein OS=Malus domestica OX=3750 GN=MALD3 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-26
Identity = 63/105 (60.00%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 16  IVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTVDRR 75
           +V +CM V   A  +TCG+V SS++ CIGY+RS  G VP  CCNGIR++N  A TT DR+
Sbjct: 12  VVALCMAV-SVAHAITCGQVTSSLAPCIGYVRSG-GAVPPACCNGIRTINGLARTTADRQ 71

Query: 76  IACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 121
            ACNCLK  AGSI G+N   AA LP KCGV+VPYKIS ST+CA V
Sbjct: 72  TACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATV 114

[Close]

BLAST of CsaV3_3G033150 vs. ExPASy Swiss-Prot
Match: Q7XJ39 (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-A PE=3 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-26
Identity = 62/114 (54.39%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 8   LMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQ 67
           L++V +V   ++        A ++CG+V S+VS C+ Y R   G     CC+G+RSLNS 
Sbjct: 6   LVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGP-SAACCSGVRSLNSA 65

Query: 68  ASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKVN 122
           ASTT DRR ACNCLK  AGSI G+N G AAS+PSKCGVS+PY ISPS DC+ VN
Sbjct: 66  ASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSVN 118

[Close]

BLAST of CsaV3_3G033150 vs. ExPASy Swiss-Prot
Match: A2ZAT0 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP2-A PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-26
Identity = 62/114 (54.39%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 8   LMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQ 67
           L++V +V   ++        A ++CG+V S+VS C+ Y R   G     CC+G+RSLNS 
Sbjct: 6   LVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGP-SAACCSGVRSLNSA 65

Query: 68  ASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKVN 122
           ASTT DRR ACNCLK  AGSI G+N G AAS+PSKCGVS+PY ISPS DC+ VN
Sbjct: 66  ASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSVN 118

[Close]

BLAST of CsaV3_3G033150 vs. ExPASy Swiss-Prot
Match: Q2QYL2 (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-26
Identity = 58/94 (61.70%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 28  AGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTVDRRIACNCLKAAAGS 87
           A ++CG+V S+VS C+ Y R   G     CC+G+RSLNS A+TT DRR ACNCLK  AGS
Sbjct: 25  AAISCGQVNSAVSPCLSYARGGSGP-SAACCSGVRSLNSAATTTADRRTACNCLKNVAGS 84

Query: 88  IEGINYGAAASLPSKCGVSVPYKISPSTDCAKVN 122
           I G+N G AAS+PSKCGVS+PY ISPS DC+ VN
Sbjct: 85  ISGLNAGNAASIPSKCGVSIPYTISPSIDCSSVN 117

[Close]

BLAST of CsaV3_3G033150 vs. ExPASy TrEMBL
Match: A0A0A0LF44 (Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_3G728130 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60
           MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG
Sbjct: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60

Query: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 120
           IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV
Sbjct: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 120

Query: 121 N 122
           N
Sbjct: 121 N 121

[Close]

BLAST of CsaV3_3G033150 vs. ExPASy TrEMBL
Match: A0A5D3DMS3 (Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00250 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.0e-35
Identity = 85/121 (70.25%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60
           MEMKLKGLM   IVGIVMMCMVV GEAA +TCG VA+++  CI YLRS    VP  CC+G
Sbjct: 1   MEMKLKGLM---IVGIVMMCMVVLGEAA-VTCGSVATAMGPCIPYLRSPSASVPAGCCSG 60

Query: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 120
           IRSLN QA+TT DRR ACNCLK+AA SI GINY AAA LP KCGVS+ Y ISP+TDC++V
Sbjct: 61  IRSLNGQAATTADRRTACNCLKSAAKSISGINYKAAAGLPGKCGVSISYPISPNTDCSRV 117

Query: 121 N 122
           N
Sbjct: 121 N 117

[Close]

BLAST of CsaV3_3G033150 vs. ExPASy TrEMBL
Match: A0A1S3B5F4 (Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103486230 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.0e-35
Identity = 85/121 (70.25%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60
           MEMKLKGLM   IVGIVMMCMVV GEAA +TCG VA+++  CI YLRS    VP  CC+G
Sbjct: 1   MEMKLKGLM---IVGIVMMCMVVLGEAA-VTCGSVATAMGPCIPYLRSPSASVPAGCCSG 60

Query: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 120
           IRSLN QA+TT DRR ACNCLK+AA SI GINY AAA LP KCGVS+ Y ISP+TDC++V
Sbjct: 61  IRSLNGQAATTADRRTACNCLKSAAKSISGINYKAAAGLPGKCGVSISYPISPNTDCSRV 117

Query: 121 N 122
           N
Sbjct: 121 N 117

[Close]

BLAST of CsaV3_3G033150 vs. ExPASy TrEMBL
Match: A0A6J1F9Q5 (Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC111442087 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.9e-34
Identity = 80/109 (73.39%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 13  IVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTV 72
           IVG+V+MCMVV GEAA ++CG VA SVS CI YL++    VP  CCNGIRSLNSQAST+V
Sbjct: 10  IVGVVLMCMVV-GEAA-ISCGTVARSVSPCISYLKNPSSGVPAACCNGIRSLNSQASTSV 69

Query: 73  DRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKVN 122
           DRR AC CLK+AA SI GIN+ AA+SLPSKCGVS+PYKISPSTDC+KVN
Sbjct: 70  DRRTACTCLKSAANSISGINFNAASSLPSKCGVSIPYKISPSTDCSKVN 116

[Close]

BLAST of CsaV3_3G033150 vs. ExPASy TrEMBL
Match: A0A6J1IX25 (Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111481432 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.5e-33
Identity = 78/109 (71.56%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 13  IVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTV 72
           +VG+V+MCMVV GEAA ++CG VASSV+ CI YLR+    +P  CC+GIRSLNSQAST+ 
Sbjct: 10  VVGVVLMCMVV-GEAA-ISCGTVASSVAPCIPYLRNPSTGLPAACCSGIRSLNSQASTSA 69

Query: 73  DRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKVN 122
           DRR ACNCLK+AA S+ GINY AA+SLPSKCGVS+PYKISPSTDC KVN
Sbjct: 70  DRRTACNCLKSAANSVSGINYNAASSLPSKCGVSIPYKISPSTDCNKVN 116

[Close]

BLAST of CsaV3_3G033150 vs. TAIR 10
Match: AT5G59310.1 (lipid transfer protein 4 )

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-21
Identity = 53/104 (50.96%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 17  VMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTVDRRI 76
           V+   +V    A +TCG VASS+S C+GYL S  G VP  CC G++ LN  A TT DR+ 
Sbjct: 12  VLTVFIVASVDAAITCGTVASSLSPCLGYL-SKGGVVPPPCCAGVKKLNGMAQTTPDRQQ 71

Query: 77  ACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 121
           AC CL++AA   +G+N   A+ LP KCGVS+PY IS ST+CA +
Sbjct: 72  ACRCLQSAA---KGVNPSLASGLPGKCGVSIPYPISTSTNCATI 111

[Close]

BLAST of CsaV3_3G033150 vs. TAIR 10
Match: AT2G38540.1 (lipid transfer protein 1 )

HSP 1 Score: 99.0 bits (245), Expect = 2.8e-21
Identity = 50/115 (43.48%), Postives = 78/115 (67.83%), Query Frame = 0


Query: 10  IVGIVGIVMMCMVVQG---EAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNS 69
           ++ +  +++ CM+V G     A ++CG V S+++ CIGY+    G +P  CC+G+++LNS
Sbjct: 4   VMKLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQG-GVIPPACCSGVKNLNS 63

Query: 70  QASTTVDRRIACNCLKAAAGSI-EGINYGAAASLPSKCGVSVPYKISPSTDCAKV 121
            A TT DR+ ACNC++ AA ++  G+N G AA +P  CGV++PYKIS ST+C  V
Sbjct: 64  IAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTV 117

[Close]

BLAST of CsaV3_3G033150 vs. TAIR 10
Match: AT5G59320.1 (lipid transfer protein 3 )

HSP 1 Score: 95.9 bits (237), Expect = 2.4e-20
Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 16  IVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTVDRR 75
           ++ +C+V   +AA ++CG VA S++ C  YL S  G VP  CC G+++LNS A TT DR+
Sbjct: 12  VLTVCIVASVDAA-ISCGTVAGSLAPCATYL-SKGGLVPPSCCAGVKTLNSMAKTTPDRQ 71

Query: 76  IACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 121
            AC C+++ A SI G+N   A+ LP KCGVS+PY IS ST+C  +
Sbjct: 72  QACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNI 114

[Close]

BLAST of CsaV3_3G033150 vs. TAIR 10
Match: AT2G38530.1 (lipid transfer protein 2 )

HSP 1 Score: 89.4 bits (220), Expect = 2.2e-18
Identity = 51/115 (44.35%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 10  IVGIVGIVMMCMVVQGEA---AGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNS 69
           ++ +  +V+ CM+V G     A M+CG V  +++GCI YL +    + Q CCNG+ +L +
Sbjct: 4   VMKLACMVLACMIVAGPITANALMSCGTVNGNLAGCIAYL-TRGAPLTQGCCNGVTNLKN 63

Query: 70  QASTTVDRRIACNCLKAAAGSI-EGINYGAAASLPSKCGVSVPYKISPSTDCAKV 121
            ASTT DR+ AC CL++AA ++  G+N   AA LPS C V++PYKIS ST+C  V
Sbjct: 64  MASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTV 117

[Close]

BLAST of CsaV3_3G033150 vs. TAIR 10
Match: AT3G08770.1 (lipid transfer protein 6 )

HSP 1 Score: 84.7 bits (208), Expect = 5.5e-17
Identity = 47/110 (42.73%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 16  IVMMCMVVQ---GEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNGIRSLNSQASTTV 75
           ++ +C+V+    GEAA ++C  V + +  C+ Y+    G VP +CCNG+ +L SQA T+V
Sbjct: 5   LLAVCLVLALHCGEAA-VSCNTVIADLYPCLSYVTQG-GPVPTLCCNGLTTLKSQAQTSV 64

Query: 76  DRRIACNCLKAAAG--SIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 121
           DR+  C C+K+A G  ++       A  LPSKCGV +PYK SPSTDC  +
Sbjct: 65  DRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSI 112

The following BLAST results are available for this feature:

BLAST of CsaV3_3G033150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651835.1	3.5e-58	100.00	non-specific lipid-transfer protein 1 [Cucumis sativus] >KGN58696.1 hypothetical...	[more]
XP_008442324.1	4.2e-35	70.25	PREDICTED: non-specific lipid-transfer protein 1-like [Cucumis melo] >TYK24911.1...	[more]
XP_022935125.1	6.1e-34	73.39	non-specific lipid-transfer protein 1-like [Cucurbita moschata]	[more]
XP_022982607.1	3.0e-33	71.56	non-specific lipid-transfer protein 1-like [Cucurbita maxima]	[more]
XP_023528122.1	6.7e-33	72.48	non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G033150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P85894	4.4e-27	65.93	Non-specific lipid-transfer protein 1 OS=Morus nigra OX=85232 PE=1 SV=1	[more]
Q9M5X7	1.3e-26	60.00	Non-specific lipid-transfer protein OS=Malus domestica OX=3750 GN=MALD3 PE=1 SV=...	[more]
Q7XJ39	1.7e-26	54.39	Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
A2ZAT0	1.7e-26	54.39	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q2QYL2	2.2e-26	61.70	Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of CsaV3_3G033150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF44	1.7e-58	100.00	Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_3G728130 P...	[more]
A0A5D3DMS3	2.0e-35	70.25	Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3B5F4	2.0e-35	70.25	Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103486230 PE=3...	[more]
A0A6J1F9Q5	2.9e-34	73.39	Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC11144208...	[more]
A0A6J1IX25	1.5e-33	71.56	Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111481432 ...	[more]

BLAST of CsaV3_3G033150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59310.1	1.7e-21	50.96	lipid transfer protein 4	[more]
AT2G38540.1	2.8e-21	43.48	lipid transfer protein 1	[more]
AT5G59320.1	2.4e-20	47.62	lipid transfer protein 3	[more]
AT2G38530.1	2.2e-18	44.35	lipid transfer protein 2	[more]
AT3G08770.1	5.5e-17	42.73	lipid transfer protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 52..66 score: 41.64 coord: 90..107 score: 55.73 coord: 73..88 score: 57.02 coord: 108..119 score: 59.87 coord: 31..47 score: 45.34
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 5..119
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PROSITE	PS00597	PLANT_LTP	coord: 99..120
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 32..117 e-value: 2.1E-12 score: 57.2
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 32..117 e-value: 9.5E-10 score: 38.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 29..121 e-value: 3.1E-29 score: 103.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 30..120
None	No IPR available	PANTHER	PTHR33076:SF95	NON-SPECIFIC LIPID-TRANSFER PROTEIN	coord: 5..119
None	No IPR available	CDD	cd01960	nsLTP1	coord: 31..117 e-value: 1.07992E-36 score: 118.221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G033150.1	CsaV3_3G033150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding