CsaV3_3G032890 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G032890
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr3: 28431065 .. 28433122 (-)
RNA-Seq ExpressionCsaV3_3G032890
SyntenyCsaV3_3G032890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCTTCTTCTCTCCACCCACACCCACTGTCTCCCCATTACCCAGAAACCCAATCACGCATACCATCGCCACCCACCATTTAATAATCTCCCTCATGTTCGTACTATGACTGTAGAGAATTATGCTAATTTATGCGTAGCCCACCAAGTGTTCGACGATATTCCTATATGGGATACTTTTGCATGGAACAATCTAATTCAAACCCATCTCACCAATGGAGATTTGGGGCATGTAATTTCAACCTATCGACAGATGTTATTTCGTGGAGTTCGTCCTGACAAACACACCCTTCCTCGAATTATATGTGCTACACGCCAGTATGGTGATCTACAGGTTGGCAAACAGCTCCACGCTCAAGCCTTCAAACTTGGGTTCTCCTCTAACCTTTATGTACTTACTTCCTTAATTGAGTTGTATGGGATTCTTGATAGTGCTGACACTGCAAAGTGGCTTCATGACAAGTCCACTTGTAGAAACTCTGTTTCTTGGACCGTTTTAGCTAAGCTGTACTTGAGGGAAGATAAACCCAGTCTTGCCCTAGACTTGTTTTACCAAATGGTGGAGTTGGCGGATGATATTGATGCAGTGGCTTTGGCCACGGCCATTGGTGCCTGTGGTGCTCTCAAAATGCTGCATCATGGGAGAAACATCCACCATCTTGCAAGAGTTCATGGCTTGGAATTTAATATATTGGTCAGTAATTCTCTATTGAAAATGTACATCGACTGTGATAGTATCAAAGATGCTCGGGGGTTCTTCGACCAAATGCCGTCCAAAGACATCATTTCCTGGACAGAACTTATCCATATGTACGTTAAGAAAGGTGGAATCAATGAGGCTTTTAAGCTGTTTCGACAAATGAATATGGATGGAGAATTGAAGCCTGATCCTCGTACAATCAGCAGCATTCTCCCAGCTTGTGGAAGAATGGCTGCACATAAGCATGGAAAAGAGATTCATGGATATGTGGTTAAAAATGCTTTTGACGAGAATCTCATCGTCCAAAATGCTTTGGTCGACATGTATGTCAAATCTGGATGTATACAATCTGCATCAAAAACTTTCTCGATGATGAAGGAGAAAGATATGGTTTCGTGGAGCATCATGACTTTGGGCTACAGCTTACATGGTCAAGGAAAACTGGGAGTCAGTTTGTTCCGTGAGATGGAGAAGAACTTTAAGATGCGTAGAGATGAGATCACTTACACTGCAGTTTTGCATGCTTGTACTACTGCAAACATGGTAGATGAAGGGGATTCTTACTTCAGTTGCATTACCAAGCCAACCGTGGCACACATTGCTCTAAAGGTGGCTCTTTTAGCTCGAGCGGGGAGACTGGATGAAGCTAGGACATTTGTAGAAAAAAAGAAACTTGATAAACATCCTGAGATTTTGAGAGCGTTGCTCGATGGATGCCGGAACCACCGTCAACAAAAACTAGGCAAGCGAATCATTGAGCAGCTGTGTGATTTGGAGCCTCTAAATGCTGAGAATTACATTCTACTTTCAAACTGGTATGCATGCAACGAAAAATGGGACATGGTTGAAAAGTTGAGAGAAACAATAAGAGACATGGGATTAAGACCCAAGAAGGCTTACAGTTGGATAGAGTTCTGCAACAAAATTCACGTGTTCGGGACAGGGGATGTATCCCACCCGAGATCACAAAACATATATTGGAATTTACAGTGCTTAATGAAAGAAATGGAAGAAGATGGTTCTAAGCCGAATCCTGATTTCAGCTTGCACGACGTCGACGAGGAGCGAGAATGTGTTCCAATAGGACACAGTGAACTGTTGGCGATTTCATTCGGGCTGATTAGTACAGAAGCAGGAAGGACAATTCGTATTACAAAGAACCTTCGTGTATGTCATAGTTGTCATGAGTCGGCAAAGTTTATATCCAAGATGGTTGGCCGAGAAATCATAGTAAAAGATCCCTATGTATTCCATCATTTTAAAGATGGTTGCTGCTCTTGTGAAAACTTTTGTTAATTTTATTGATGGTCGTTGTTATAGTTTAGAGACCACTGCTCTCATTTGGGTGTAGCTTAG

mRNA sequence

ATGAATCTTCTTCTCTCCACCCACACCCACTGTCTCCCCATTACCCAGAAACCCAATCACGCATACCATCGCCACCCACCATTTAATAATCTCCCTCATGTTCGTACTATGACTGTAGAGAATTATGCTAATTTATGCGTAGCCCACCAAGTGTTCGACGATATTCCTATATGGGATACTTTTGCATGGAACAATCTAATTCAAACCCATCTCACCAATGGAGATTTGGGGCATGTAATTTCAACCTATCGACAGATGTTATTTCGTGGAGTTCGTCCTGACAAACACACCCTTCCTCGAATTATATGTGCTACACGCCAGTATGGTGATCTACAGGTTGGCAAACAGCTCCACGCTCAAGCCTTCAAACTTGGGTTCTCCTCTAACCTTTATGTACTTACTTCCTTAATTGAGTTGTATGGGATTCTTGATAGTGCTGACACTGCAAAGTGGCTTCATGACAAGTCCACTTGTAGAAACTCTGTTTCTTGGACCGTTTTAGCTAAGCTGTACTTGAGGGAAGATAAACCCAGTCTTGCCCTAGACTTGTTTTACCAAATGGTGGAGTTGGCGGATGATATTGATGCAGTGGCTTTGGCCACGGCCATTGGTGCCTGTGGTGCTCTCAAAATGCTGCATCATGGGAGAAACATCCACCATCTTGCAAGAGTTCATGGCTTGGAATTTAATATATTGGTCAGTAATTCTCTATTGAAAATGTACATCGACTGTGATAGTATCAAAGATGCTCGGGGGTTCTTCGACCAAATGCCGTCCAAAGACATCATTTCCTGGACAGAACTTATCCATATGTACGTTAAGAAAGGTGGAATCAATGAGGCTTTTAAGCTGTTTCGACAAATGAATATGGATGGAGAATTGAAGCCTGATCCTCGTACAATCAGCAGCATTCTCCCAGCTTGTGGAAGAATGGCTGCACATAAGCATGGAAAAGAGATTCATGGATATGTGGTTAAAAATGCTTTTGACGAGAATCTCATCGTCCAAAATGCTTTGGTCGACATGTATGTCAAATCTGGATGTATACAATCTGCATCAAAAACTTTCTCGATGATGAAGGAGAAAGATATGGTTTCGTGGAGCATCATGACTTTGGGCTACAGCTTACATGGTCAAGGAAAACTGGGAGTCAGTTTGTTCCGTGAGATGGAGAAGAACTTTAAGATGCGTAGAGATGAGATCACTTACACTGCAGTTTTGCATGCTTGTACTACTGCAAACATGTTTAGAGACCACTGCTCTCATTTGGGTGTAGCTTAG

Coding sequence (CDS)

ATGAATCTTCTTCTCTCCACCCACACCCACTGTCTCCCCATTACCCAGAAACCCAATCACGCATACCATCGCCACCCACCATTTAATAATCTCCCTCATGTTCGTACTATGACTGTAGAGAATTATGCTAATTTATGCGTAGCCCACCAAGTGTTCGACGATATTCCTATATGGGATACTTTTGCATGGAACAATCTAATTCAAACCCATCTCACCAATGGAGATTTGGGGCATGTAATTTCAACCTATCGACAGATGTTATTTCGTGGAGTTCGTCCTGACAAACACACCCTTCCTCGAATTATATGTGCTACACGCCAGTATGGTGATCTACAGGTTGGCAAACAGCTCCACGCTCAAGCCTTCAAACTTGGGTTCTCCTCTAACCTTTATGTACTTACTTCCTTAATTGAGTTGTATGGGATTCTTGATAGTGCTGACACTGCAAAGTGGCTTCATGACAAGTCCACTTGTAGAAACTCTGTTTCTTGGACCGTTTTAGCTAAGCTGTACTTGAGGGAAGATAAACCCAGTCTTGCCCTAGACTTGTTTTACCAAATGGTGGAGTTGGCGGATGATATTGATGCAGTGGCTTTGGCCACGGCCATTGGTGCCTGTGGTGCTCTCAAAATGCTGCATCATGGGAGAAACATCCACCATCTTGCAAGAGTTCATGGCTTGGAATTTAATATATTGGTCAGTAATTCTCTATTGAAAATGTACATCGACTGTGATAGTATCAAAGATGCTCGGGGGTTCTTCGACCAAATGCCGTCCAAAGACATCATTTCCTGGACAGAACTTATCCATATGTACGTTAAGAAAGGTGGAATCAATGAGGCTTTTAAGCTGTTTCGACAAATGAATATGGATGGAGAATTGAAGCCTGATCCTCGTACAATCAGCAGCATTCTCCCAGCTTGTGGAAGAATGGCTGCACATAAGCATGGAAAAGAGATTCATGGATATGTGGTTAAAAATGCTTTTGACGAGAATCTCATCGTCCAAAATGCTTTGGTCGACATGTATGTCAAATCTGGATGTATACAATCTGCATCAAAAACTTTCTCGATGATGAAGGAGAAAGATATGGTTTCGTGGAGCATCATGACTTTGGGCTACAGCTTACATGGTCAAGGAAAACTGGGAGTCAGTTTGTTCCGTGAGATGGAGAAGAACTTTAAGATGCGTAGAGATGAGATCACTTACACTGCAGTTTTGCATGCTTGTACTACTGCAAACATGTTTAGAGACCACTGCTCTCATTTGGGTGTAGCTTAG

Protein sequence

MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRDHCSHLGVA*
Homology
BLAST of CsaV3_3G032890 vs. NCBI nr
Match: KAE8650963.1 (hypothetical protein Csa_002291 [Cucumis sativus])

HSP 1 Score: 882.5 bits (2279), Expect = 1.5e-252
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA
Sbjct: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM
Sbjct: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT
Sbjct: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRDHC 420
           EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRDHC
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRDHC 420

Query: 421 SHLGVA 427
           SHLGVA
Sbjct: 421 SHLGVA 426

BLAST of CsaV3_3G032890 vs. NCBI nr
Match: XP_004137884.2 (pentatricopeptide repeat-containing protein DOT4, chloroplastic [Cucumis sativus])

HSP 1 Score: 857.1 bits (2213), Expect = 6.7e-245
Identity = 415/415 (100.00%), Postives = 415/415 (100.00%), Query Frame = 0

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA
Sbjct: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM
Sbjct: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT
Sbjct: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 416
           EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 415

BLAST of CsaV3_3G032890 vs. NCBI nr
Match: XP_008465161.1 (PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucumis melo])

HSP 1 Score: 822.8 bits (2124), Expect = 1.4e-234
Identity = 394/415 (94.94%), Postives = 404/415 (97.35%), Query Frame = 0

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           MNLLLSTHTHCLPITQKP HAYHRHPPFNNLPHVRT TVENYA+LCVAHQVFD+IPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPYHAYHRHPPFNNLPHVRTTTVENYADLCVAHQVFDEIPIWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLTNGD GHVIS YRQMLFRGVRPDKHTLPRIICATRQYGDL VGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDWGHVISIYRQMLFRGVRPDKHTLPRIICATRQYGDLPVGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           AFKLGFSS+LYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWT+LAKLYLREDKPS A
Sbjct: 121 AFKLGFSSDLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTILAKLYLREDKPSFA 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           +DLFYQMVELADDID+VALATAIGACGALKMLHHGRNIHHLAR+HGLEFNILVSNSLLKM
Sbjct: 181 IDLFYQMVELADDIDSVALATAIGACGALKMLHHGRNIHHLARIHGLEFNILVSNSLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           Y+DCDSIKDARGFFDQMPSKD+ISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDP T
Sbjct: 241 YLDCDSIKDARGFFDQMPSKDVISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGRMAAHKHGKEIHGYV+KN FDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVLKNGFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 416
           EKDMVSWSIMTLGYSLHGQGKLGV LFREMEKN KM RDEITYTAVLHACTTANM
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVGLFREMEKNLKMHRDEITYTAVLHACTTANM 415

BLAST of CsaV3_3G032890 vs. NCBI nr
Match: XP_038905218.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like isoform X1 [Benincasa hispida])

HSP 1 Score: 758.4 bits (1957), Expect = 3.2e-215
Identity = 369/416 (88.70%), Postives = 390/416 (93.75%), Query Frame = 0

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           MNLLLSTH HCLPITQ+ +H      PFNN PHVRT T +N ANL VAHQ+FD+IPIWDT
Sbjct: 1   MNLLLSTHVHCLPITQETSH----RQPFNNPPHVRTTTAKNSANLSVAHQLFDEIPIWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLTNGDLGHVISTY+QMLFRGVRPDKHTLPRIICATRQYG+LQ GKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDLGHVISTYQQMLFRGVRPDKHTLPRIICATRQYGNLQFGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           AFKLGFSSNLYVLTSLIE YGILDSADTAKWLHDKS CRNSVSWT+LAKLYL EDKPS A
Sbjct: 121 AFKLGFSSNLYVLTSLIEFYGILDSADTAKWLHDKSACRNSVSWTMLAKLYLMEDKPSCA 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           +DLFYQMVELADDIDAVALATAIGACGALKML HGRNIH LAR+HGLEFN+LVSNSLLKM
Sbjct: 181 IDLFYQMVELADDIDAVALATAIGACGALKMLQHGRNIHLLARIHGLEFNVLVSNSLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           Y+DCDSIKDARGFFD+MPSKD+ISWTELIHMYVKKGGINEAFKLFRQMN DG LKPDP T
Sbjct: 241 YLDCDSIKDARGFFDRMPSKDVISWTELIHMYVKKGGINEAFKLFRQMNKDGGLKPDPLT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGRMAAHKHGKEIHGYV+KNAFDENLIVQNALVDMYVKSGCIQSAS+TFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVLKNAFDENLIVQNALVDMYVKSGCIQSASETFSMMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKM-RRDEITYTAVLHACTTANM 416
           EKDMVSW+IMTLGYSLHGQGKLGVSLFRE+E+N +M  RD+ITYTAVLHACTTANM
Sbjct: 361 EKDMVSWTIMTLGYSLHGQGKLGVSLFREIERNLRMHNRDQITYTAVLHACTTANM 412

BLAST of CsaV3_3G032890 vs. NCBI nr
Match: XP_023539701.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 716.1 bits (1847), Expect = 1.8e-202
Identity = 338/418 (80.86%), Postives = 376/418 (89.95%), Query Frame = 0

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           MNLLLST  H LP+TQKPNH YHRH  FNN PHVRT T E  A+LCVAHQ+FDDIPIWDT
Sbjct: 1   MNLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLT+GD+GHVISTY+QML RGVRPD HTLPR+ICA+R YGDLQ+GKQLHAQ
Sbjct: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           AFKLG  SNLYV TSLIELYGILDSADTA+WLHDKS CRN+VSWT+LAKLYL EDKPS +
Sbjct: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           +DLFYQMVELA DIDAVALATA+GACGA K+L HGRNIHH+AR+HGLEF++LVSN LLKM
Sbjct: 181 IDLFYQMVELAADIDAVALATALGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           Y+DC SIKDARG F++MP +DIISWT+LIH YVK GGINEA KLFRQMNMDGELKPDP T
Sbjct: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGR+AAHKHG+EIHGYV+KN FD+NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRD 419
           EKDMVSW++M  GYSLHGQGKLGV LFREM++NF++ RDEITYTAVL AC+TA+M  +
Sbjct: 361 EKDMVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEE 418

BLAST of CsaV3_3G032890 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.2e-60
Identity = 120/368 (32.61%), Postives = 201/368 (54.62%), Query Frame = 0

Query: 48  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 107
           A +VFD++   D  +WN++I  +++NG     +S + QML  G+  D  T+  +      
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD 308

Query: 108 YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVL 167
              + +G+ +H+   K  FS       +L+++Y      D+AK +  + + R+ VS+T +
Sbjct: 309 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSM 368

Query: 168 AKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGL 227
              Y RE     A+ LF +M E     D   +   +  C   ++L  G+ +H   + + L
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428

Query: 228 EFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQ 287
            F+I VSN+L+ MY  C S+++A   F +M  KDIISW  +I  Y K    NEA  LF  
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488

Query: 288 MNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSG 347
           +  +    PD RT++ +LPAC  ++A   G+EIHGY+++N +  +  V N+LVDMY K G
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548

Query: 348 CIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVL 407
            +  A   F  +  KD+VSW++M  GY +HG GK  ++LF +M +   +  DEI++ ++L
Sbjct: 549 ALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADEISFVSLL 608

Query: 408 HACTTANM 416
           +AC+ + +
Sbjct: 609 YACSHSGL 615

BLAST of CsaV3_3G032890 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.9e-57
Identity = 119/380 (31.32%), Postives = 206/380 (54.21%), Query Frame = 0

Query: 41  NYANLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPR 100
           ++ ++  A QVFDD+P    F WN +I+ +  N      +  Y  M    V PD  T P 
Sbjct: 65  SFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPH 124

Query: 101 IICATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTC-- 160
           ++ A      LQ+G+ +HAQ F+LGF ++++V   LI LY       +A+ + +      
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184

Query: 161 RNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNI 220
           R  VSWT +   Y +  +P  AL++F QM ++    D VAL + + A   L+ L  GR+I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244

Query: 221 HHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGI 280
           H      GLE    +  SL  MY  C  +  A+  FD+M S ++I W  +I  Y K G  
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304

Query: 281 NEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNA 340
            EA  +F +M ++ +++PD  +I+S + AC ++ + +  + ++ YV ++ + +++ + +A
Sbjct: 305 REAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 364

Query: 341 LVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRR 400
           L+DM+ K G ++ A   F    ++D+V WS M +GY LHG+ +  +SL+R ME+   +  
Sbjct: 365 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG-GVHP 424

Query: 401 DEITYTAVLHACTTANMFRD 419
           +++T+  +L AC  + M R+
Sbjct: 425 NDVTFLGLLMACNHSGMVRE 442

BLAST of CsaV3_3G032890 vs. ExPASy Swiss-Prot
Match: Q9C507 (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.3e-53
Identity = 110/370 (29.73%), Postives = 206/370 (55.68%), Query Frame = 0

Query: 44  NLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIIC 103
           NL  A +VFD +P+ D  AW+ L+ + L NG++   +  ++ M+  GV PD  T+  ++ 
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210

Query: 104 ATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVS 163
              + G L++ + +H Q  +  F  +  +  SL+ +Y       +++ + +K   +N+VS
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270

Query: 164 WTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLAR 223
           WT +   Y R +    AL  F +M++   + + V L + + +CG + ++  G+++H  A 
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330

Query: 224 VHGLEFNI-LVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAF 283
              L+ N   +S +L+++Y +C  + D       +  ++I++W  LI +Y  +G + +A 
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390

Query: 284 KLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDM 343
            LFRQM +   +KPD  T++S + AC        GK+IHG+V++    +   VQN+L+DM
Sbjct: 391 GLFRQM-VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDM 450

Query: 344 YVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEIT 403
           Y KSG + SAS  F+ +K + +V+W+ M  G+S +G     +SLF  M  ++ +  +E+T
Sbjct: 451 YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY-LEMNEVT 510

Query: 404 YTAVLHACTT 413
           + AV+ AC++
Sbjct: 511 FLAVIQACSS 517

BLAST of CsaV3_3G032890 vs. ExPASy Swiss-Prot
Match: Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 207.2 bits (526), Expect = 3.6e-52
Identity = 122/400 (30.50%), Postives = 200/400 (50.00%), Query Frame = 0

Query: 48  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICA-TR 107
           A+++F  IP  D   WNN+I+        G  +  Y  ML  GV PD HT P ++    R
Sbjct: 87  AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146

Query: 108 QYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTV 167
             G L  GK+LH    K G  SNLYV  +L+++Y +    D A+ + D+    +  SW +
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206

Query: 168 LAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHG 227
           +   Y R  +   +++L  +M        +V L   + AC  +K     + +H       
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266

Query: 228 LEFNILVSN-------------------------------SLLKMYIDCDSIKDARGFFD 287
            E ++ + N                               S++K Y++  ++K AR +FD
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326

Query: 288 QMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHK 347
           QMP +D ISWT +I  Y++ G  NE+ ++FR+M   G + PD  T+ S+L AC  + + +
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLE 386

Query: 348 HGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYS 407
            G+ I  Y+ KN    +++V NAL+DMY K GC + A K F  M ++D  +W+ M +G +
Sbjct: 387 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA 446

Query: 408 LHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 416
            +GQG+  + +F +M+ +  ++ D+ITY  VL AC  + M
Sbjct: 447 NNGQGQEAIKVFFQMQ-DMSIQPDDITYLGVLSACNHSGM 484

BLAST of CsaV3_3G032890 vs. ExPASy Swiss-Prot
Match: O49619 (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H27 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.4e-50
Identity = 117/372 (31.45%), Postives = 204/372 (54.84%), Query Frame = 0

Query: 48  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 107
           A +VF+++P  D  +WN++I  +L  GD    +  +++ML  G +PD+ +    + A   
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243

Query: 108 YGDLQVGKQLHAQAFKLGF-SSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTV 167
               ++GK++H  A +    + ++ V+TS++++Y        A+ + +    RN V+W V
Sbjct: 244 VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303

Query: 168 LAKLYLREDKPSLALDLFYQMVE---LADDIDAVALATAIGACGALKMLHHGRNIHHLAR 227
           +   Y R  + + A   F +M E   L  D+      T+I    A  +L  GR IH  A 
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDV-----ITSINLLPASAIL-EGRTIHGYAM 363

Query: 228 VHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFK 287
             G   ++++  +L+ MY +C  +K A   FD+M  K++ISW  +I  YV+ G    A +
Sbjct: 364 RRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 423

Query: 288 LFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMY 347
           LF+++  D  L PD  TI+SILPA     +   G+EIH Y+VK+ +  N I+ N+LV MY
Sbjct: 424 LFQEL-WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 483

Query: 348 VKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITY 407
              G ++ A K F+ +  KD+VSW+ + + Y++HG G++ V LF EM  + ++  ++ T+
Sbjct: 484 AMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS-RVNPNKSTF 543

Query: 408 TAVLHACTTANM 416
            ++L AC+ + M
Sbjct: 544 ASLLAACSISGM 547

BLAST of CsaV3_3G032890 vs. ExPASy TrEMBL
Match: A0A0A0L9N4 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G722890 PE=3 SV=1)

HSP 1 Score: 857.1 bits (2213), Expect = 3.2e-245
Identity = 415/415 (100.00%), Postives = 415/415 (100.00%), Query Frame = 0

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA
Sbjct: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM
Sbjct: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT
Sbjct: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 416
           EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 415

BLAST of CsaV3_3G032890 vs. ExPASy TrEMBL
Match: A0A1S3CPR5 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103502829 PE=3 SV=1)

HSP 1 Score: 822.8 bits (2124), Expect = 6.7e-235
Identity = 394/415 (94.94%), Postives = 404/415 (97.35%), Query Frame = 0

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           MNLLLSTHTHCLPITQKP HAYHRHPPFNNLPHVRT TVENYA+LCVAHQVFD+IPIWDT
Sbjct: 1   MNLLLSTHTHCLPITQKPYHAYHRHPPFNNLPHVRTTTVENYADLCVAHQVFDEIPIWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLTNGD GHVIS YRQMLFRGVRPDKHTLPRIICATRQYGDL VGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDWGHVISIYRQMLFRGVRPDKHTLPRIICATRQYGDLPVGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           AFKLGFSS+LYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWT+LAKLYLREDKPS A
Sbjct: 121 AFKLGFSSDLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTILAKLYLREDKPSFA 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           +DLFYQMVELADDID+VALATAIGACGALKMLHHGRNIHHLAR+HGLEFNILVSNSLLKM
Sbjct: 181 IDLFYQMVELADDIDSVALATAIGACGALKMLHHGRNIHHLARIHGLEFNILVSNSLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           Y+DCDSIKDARGFFDQMPSKD+ISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDP T
Sbjct: 241 YLDCDSIKDARGFFDQMPSKDVISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGRMAAHKHGKEIHGYV+KN FDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVLKNGFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 416
           EKDMVSWSIMTLGYSLHGQGKLGV LFREMEKN KM RDEITYTAVLHACTTANM
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVGLFREMEKNLKMHRDEITYTAVLHACTTANM 415

BLAST of CsaV3_3G032890 vs. ExPASy TrEMBL
Match: A0A6J1I9E1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111470851 PE=3 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 2.6e-202
Identity = 338/418 (80.86%), Postives = 376/418 (89.95%), Query Frame = 0

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           M+LLLST  H LP+TQKPNH YHRH  FNN PHVRT T E  A+LCVAHQ+FDDIPIWDT
Sbjct: 1   MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLT+GD+GHVISTY+QML RGVRPD HTLPR+ICA+R YGDLQ+GKQLHAQ
Sbjct: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           AFKLG  SNLYV TSLIELYGILDSADTA+WLHDKS CRN+VSWT+LAKLYL EDKPS +
Sbjct: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           LDLFYQMVELA DIDAVALATAIGACGA K+L HGRNIHH+AR+HGLEF++LVSN LLKM
Sbjct: 181 LDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           Y+DC SIKDARG F++MP +DIISWT+LIH YVK GGINEA KLFRQMNMDGELKPDP T
Sbjct: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGR+AAHKHG+EIHGYV+KN FD+NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRIAAHKHGREIHGYVLKNDFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRD 419
           EKDMVSW++M  GYSLHGQGKLGV LFREM++NF++ RDEITYTAVL +C+TA+M  +
Sbjct: 361 EKDMVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQSCSTASMVEE 418

BLAST of CsaV3_3G032890 vs. ExPASy TrEMBL
Match: A0A6J1EXC6 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111439085 PE=3 SV=1)

HSP 1 Score: 707.6 bits (1825), Expect = 3.2e-200
Identity = 336/418 (80.38%), Postives = 373/418 (89.23%), Query Frame = 0

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           M+LLLST  H LP+TQKPNH Y RH  FNN PHVRT T E  A+LCVAHQ+FDDIPIWDT
Sbjct: 1   MDLLLSTPIHRLPLTQKPNHTYDRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLT+GD+GHVISTY+QML RGVRPD HTLPR+ICA+R YGDLQ+GKQLHAQ
Sbjct: 61  FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
           AFKLG  SNLYV TSLIELYGILDSADTA+WLHDKS CRN+VSWT+LAKLYL EDKPS +
Sbjct: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           +DLFYQMVELA DIDAVALATAIGACGA K+L HGRNIHH+AR+HGLEF+ILVSN LLKM
Sbjct: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           Y+DC SIKDARG F++MP +DIISWT+LIH YVK GGINEA KLFRQMNMDGELKPDP T
Sbjct: 241 YLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGR+ AHKHG+EIHGYV+KN FD+NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRD 419
           EKDMVSW+++  GYSLHGQGKLGV LFREM++NF + RDEITYTAVL AC+TA+M  +
Sbjct: 361 EKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEE 418

BLAST of CsaV3_3G032890 vs. ExPASy TrEMBL
Match: A0A6J1E0A4 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111025202 PE=3 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 3.6e-196
Identity = 336/418 (80.38%), Postives = 367/418 (87.80%), Query Frame = 0

Query: 1   MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
           M+LLLSTH   LPIT K +  Y R  PFNN PHVRT   ENYANLC AH  FD+IP WDT
Sbjct: 1   MDLLLSTHFRRLPITPKTDLTYRRRRPFNNPPHVRTAITENYANLCEAHHPFDEIPTWDT 60

Query: 61  FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
           FAWNNLIQTHLTNGD+G VISTY QML RGVRPD HTLPRII A+RQ GDLQVGKQLHAQ
Sbjct: 61  FAWNNLIQTHLTNGDVGLVISTYEQMLLRGVRPDNHTLPRIIGASRQCGDLQVGKQLHAQ 120

Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
            FKLGFSSNLYV+TSLIELYGILD ADTAKWLHDKS CRNSVSWT+LAKLY+ EDKPS A
Sbjct: 121 VFKLGFSSNLYVITSLIELYGILDGADTAKWLHDKSACRNSVSWTMLAKLYVMEDKPSFA 180

Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
           +DLFYQMVELA DIDAVALATAIGACG+LK+L HGRNIH LAR HGLEF++LVSNSLLKM
Sbjct: 181 IDLFYQMVELAADIDAVALATAIGACGSLKLLQHGRNIHLLARTHGLEFDVLVSNSLLKM 240

Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
           Y+DC SI+DARGFF++MPSKD+ISWTELI  YVKKGGINE FKLFRQMNMDG LKPDP T
Sbjct: 241 YLDCGSIRDARGFFNRMPSKDVISWTELIQAYVKKGGINEGFKLFRQMNMDGGLKPDPIT 300

Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
           ISSILPACGRMAAHKHG+EIHGYV+K+A D NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRMAAHKHGREIHGYVLKSAIDVNLIVQNALVDMYVKSGCIQSALKIFSRMK 360

Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRD 419
           EKD +SW++M LGYSLHGQGKLGVSLFR ME+N +M RDEITYT+VLHAC+TA++  +
Sbjct: 361 EKDAISWTVMILGYSLHGQGKLGVSLFRLMERNLRMHRDEITYTSVLHACSTASLVEE 418

BLAST of CsaV3_3G032890 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 233.0 bits (593), Expect = 4.4e-61
Identity = 120/368 (32.61%), Postives = 201/368 (54.62%), Query Frame = 0

Query: 48  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 107
           A +VFD++   D  +WN++I  +++NG     +S + QML  G+  D  T+  +      
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD 308

Query: 108 YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVL 167
              + +G+ +H+   K  FS       +L+++Y      D+AK +  + + R+ VS+T +
Sbjct: 309 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSM 368

Query: 168 AKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGL 227
              Y RE     A+ LF +M E     D   +   +  C   ++L  G+ +H   + + L
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428

Query: 228 EFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQ 287
            F+I VSN+L+ MY  C S+++A   F +M  KDIISW  +I  Y K    NEA  LF  
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488

Query: 288 MNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSG 347
           +  +    PD RT++ +LPAC  ++A   G+EIHGY+++N +  +  V N+LVDMY K G
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548

Query: 348 CIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVL 407
            +  A   F  +  KD+VSW++M  GY +HG GK  ++LF +M +   +  DEI++ ++L
Sbjct: 549 ALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADEISFVSLL 608

Query: 408 HACTTANM 416
           +AC+ + +
Sbjct: 609 YACSHSGL 615

BLAST of CsaV3_3G032890 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 224.2 bits (570), Expect = 2.0e-58
Identity = 119/380 (31.32%), Postives = 206/380 (54.21%), Query Frame = 0

Query: 41  NYANLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPR 100
           ++ ++  A QVFDD+P    F WN +I+ +  N      +  Y  M    V PD  T P 
Sbjct: 65  SFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPH 124

Query: 101 IICATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTC-- 160
           ++ A      LQ+G+ +HAQ F+LGF ++++V   LI LY       +A+ + +      
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184

Query: 161 RNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNI 220
           R  VSWT +   Y +  +P  AL++F QM ++    D VAL + + A   L+ L  GR+I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244

Query: 221 HHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGI 280
           H      GLE    +  SL  MY  C  +  A+  FD+M S ++I W  +I  Y K G  
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304

Query: 281 NEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNA 340
            EA  +F +M ++ +++PD  +I+S + AC ++ + +  + ++ YV ++ + +++ + +A
Sbjct: 305 REAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 364

Query: 341 LVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRR 400
           L+DM+ K G ++ A   F    ++D+V WS M +GY LHG+ +  +SL+R ME+   +  
Sbjct: 365 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG-GVHP 424

Query: 401 DEITYTAVLHACTTANMFRD 419
           +++T+  +L AC  + M R+
Sbjct: 425 NDVTFLGLLMACNHSGMVRE 442

BLAST of CsaV3_3G032890 vs. TAIR 10
Match: AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 209.5 bits (532), Expect = 5.2e-54
Identity = 110/370 (29.73%), Postives = 206/370 (55.68%), Query Frame = 0

Query: 44  NLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIIC 103
           NL  A +VFD +P+ D  AW+ L+ + L NG++   +  ++ M+  GV PD  T+  ++ 
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210

Query: 104 ATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVS 163
              + G L++ + +H Q  +  F  +  +  SL+ +Y       +++ + +K   +N+VS
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270

Query: 164 WTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLAR 223
           WT +   Y R +    AL  F +M++   + + V L + + +CG + ++  G+++H  A 
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330

Query: 224 VHGLEFNI-LVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAF 283
              L+ N   +S +L+++Y +C  + D       +  ++I++W  LI +Y  +G + +A 
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390

Query: 284 KLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDM 343
            LFRQM +   +KPD  T++S + AC        GK+IHG+V++    +   VQN+L+DM
Sbjct: 391 GLFRQM-VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDM 450

Query: 344 YVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEIT 403
           Y KSG + SAS  F+ +K + +V+W+ M  G+S +G     +SLF  M  ++ +  +E+T
Sbjct: 451 YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY-LEMNEVT 510

Query: 404 YTAVLHACTT 413
           + AV+ AC++
Sbjct: 511 FLAVIQACSS 517

BLAST of CsaV3_3G032890 vs. TAIR 10
Match: AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 207.2 bits (526), Expect = 2.6e-53
Identity = 122/400 (30.50%), Postives = 200/400 (50.00%), Query Frame = 0

Query: 48  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICA-TR 107
           A+++F  IP  D   WNN+I+        G  +  Y  ML  GV PD HT P ++    R
Sbjct: 87  AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146

Query: 108 QYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTV 167
             G L  GK+LH    K G  SNLYV  +L+++Y +    D A+ + D+    +  SW +
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206

Query: 168 LAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHG 227
           +   Y R  +   +++L  +M        +V L   + AC  +K     + +H       
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266

Query: 228 LEFNILVSN-------------------------------SLLKMYIDCDSIKDARGFFD 287
            E ++ + N                               S++K Y++  ++K AR +FD
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326

Query: 288 QMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHK 347
           QMP +D ISWT +I  Y++ G  NE+ ++FR+M   G + PD  T+ S+L AC  + + +
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLE 386

Query: 348 HGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYS 407
            G+ I  Y+ KN    +++V NAL+DMY K GC + A K F  M ++D  +W+ M +G +
Sbjct: 387 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA 446

Query: 408 LHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 416
            +GQG+  + +F +M+ +  ++ D+ITY  VL AC  + M
Sbjct: 447 NNGQGQEAIKVFFQMQ-DMSIQPDDITYLGVLSACNHSGM 484

BLAST of CsaV3_3G032890 vs. TAIR 10
Match: AT4G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 200.7 bits (509), Expect = 2.4e-51
Identity = 117/372 (31.45%), Postives = 204/372 (54.84%), Query Frame = 0

Query: 48  AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 107
           A +VF+++P  D  +WN++I  +L  GD    +  +++ML  G +PD+ +    + A   
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243

Query: 108 YGDLQVGKQLHAQAFKLGF-SSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTV 167
               ++GK++H  A +    + ++ V+TS++++Y        A+ + +    RN V+W V
Sbjct: 244 VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303

Query: 168 LAKLYLREDKPSLALDLFYQMVE---LADDIDAVALATAIGACGALKMLHHGRNIHHLAR 227
           +   Y R  + + A   F +M E   L  D+      T+I    A  +L  GR IH  A 
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDV-----ITSINLLPASAIL-EGRTIHGYAM 363

Query: 228 VHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFK 287
             G   ++++  +L+ MY +C  +K A   FD+M  K++ISW  +I  YV+ G    A +
Sbjct: 364 RRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 423

Query: 288 LFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMY 347
           LF+++  D  L PD  TI+SILPA     +   G+EIH Y+VK+ +  N I+ N+LV MY
Sbjct: 424 LFQEL-WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 483

Query: 348 VKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITY 407
              G ++ A K F+ +  KD+VSW+ + + Y++HG G++ V LF EM  + ++  ++ T+
Sbjct: 484 AMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS-RVNPNKSTF 543

Query: 408 TAVLHACTTANM 416
            ++L AC+ + M
Sbjct: 544 ASLLAACSISGM 547

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8650963.11.5e-252100.00hypothetical protein Csa_002291 [Cucumis sativus][more]
XP_004137884.26.7e-245100.00pentatricopeptide repeat-containing protein DOT4, chloroplastic [Cucumis sativus... [more]
XP_008465161.11.4e-23494.94PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like ... [more]
XP_038905218.13.2e-21588.70pentatricopeptide repeat-containing protein DOT4, chloroplastic-like isoform X1 ... [more]
XP_023539701.11.8e-20280.86pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... [more]
Match NameE-valueIdentityDescription
Q9SN396.2e-6032.61Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Q9LTV82.9e-5731.32Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
Q9C5077.3e-5329.73Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS... [more]
Q9LSB83.6e-5230.50Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... [more]
O496193.4e-5031.45Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0L9N43.2e-245100.00DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G7228... [more]
A0A1S3CPR56.7e-23594.94pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucumis ... [more]
A0A6J1I9E12.6e-20280.86pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbit... [more]
A0A6J1EXC63.2e-20080.38pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbit... [more]
A0A6J1E0A43.6e-19680.38pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Momordic... [more]
Match NameE-valueIdentityDescription
AT4G18750.14.4e-6132.61Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G12770.12.0e-5831.32mitochondrial editing factor 22 [more]
AT1G69350.15.2e-5429.73Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G15930.12.6e-5330.50Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G35130.12.4e-5131.45Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 169..314
e-value: 4.9E-25
score: 90.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 315..422
e-value: 8.9E-17
score: 63.0
coord: 38..141
e-value: 5.4E-10
score: 40.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 263..297
e-value: 8.5E-4
score: 17.3
coord: 62..94
e-value: 0.0012
score: 16.9
coord: 335..365
e-value: 0.0017
score: 16.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 260..308
e-value: 5.2E-9
score: 36.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 62..91
e-value: 0.83
score: 10.0
coord: 365..393
e-value: 0.0065
score: 16.6
coord: 337..363
e-value: 0.0064
score: 16.7
coord: 162..189
e-value: 0.0048
score: 17.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 59..93
score: 9.930995
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 332..366
score: 8.53891
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 261..295
score: 9.876189
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 1..415
NoneNo IPR availablePANTHERPTHR24015:SF1853REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 1..415

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G032890.1CsaV3_3G032890.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding