Homology
BLAST of CsaV3_3G032890 vs. NCBI nr
Match:
KAE8650963.1 (hypothetical protein Csa_002291 [Cucumis sativus])
HSP 1 Score: 882.5 bits (2279), Expect = 1.5e-252
Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0
Query: 1 MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT
Sbjct: 1 MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
Query: 61 FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ
Sbjct: 61 FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA
Sbjct: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM
Sbjct: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT
Sbjct: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRDHC 420
EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRDHC
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRDHC 420
Query: 421 SHLGVA 427
SHLGVA
Sbjct: 421 SHLGVA 426
BLAST of CsaV3_3G032890 vs. NCBI nr
Match:
XP_004137884.2 (pentatricopeptide repeat-containing protein DOT4, chloroplastic [Cucumis sativus])
HSP 1 Score: 857.1 bits (2213), Expect = 6.7e-245
Identity = 415/415 (100.00%), Postives = 415/415 (100.00%), Query Frame = 0
Query: 1 MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT
Sbjct: 1 MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
Query: 61 FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ
Sbjct: 61 FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA
Sbjct: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM
Sbjct: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT
Sbjct: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 416
EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 415
BLAST of CsaV3_3G032890 vs. NCBI nr
Match:
XP_008465161.1 (PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucumis melo])
HSP 1 Score: 822.8 bits (2124), Expect = 1.4e-234
Identity = 394/415 (94.94%), Postives = 404/415 (97.35%), Query Frame = 0
Query: 1 MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
MNLLLSTHTHCLPITQKP HAYHRHPPFNNLPHVRT TVENYA+LCVAHQVFD+IPIWDT
Sbjct: 1 MNLLLSTHTHCLPITQKPYHAYHRHPPFNNLPHVRTTTVENYADLCVAHQVFDEIPIWDT 60
Query: 61 FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
FAWNNLIQTHLTNGD GHVIS YRQMLFRGVRPDKHTLPRIICATRQYGDL VGKQLHAQ
Sbjct: 61 FAWNNLIQTHLTNGDWGHVISIYRQMLFRGVRPDKHTLPRIICATRQYGDLPVGKQLHAQ 120
Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
AFKLGFSS+LYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWT+LAKLYLREDKPS A
Sbjct: 121 AFKLGFSSDLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTILAKLYLREDKPSFA 180
Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
+DLFYQMVELADDID+VALATAIGACGALKMLHHGRNIHHLAR+HGLEFNILVSNSLLKM
Sbjct: 181 IDLFYQMVELADDIDSVALATAIGACGALKMLHHGRNIHHLARIHGLEFNILVSNSLLKM 240
Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
Y+DCDSIKDARGFFDQMPSKD+ISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDP T
Sbjct: 241 YLDCDSIKDARGFFDQMPSKDVISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPLT 300
Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
ISSILPACGRMAAHKHGKEIHGYV+KN FDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVLKNGFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 416
EKDMVSWSIMTLGYSLHGQGKLGV LFREMEKN KM RDEITYTAVLHACTTANM
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVGLFREMEKNLKMHRDEITYTAVLHACTTANM 415
BLAST of CsaV3_3G032890 vs. NCBI nr
Match:
XP_038905218.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like isoform X1 [Benincasa hispida])
HSP 1 Score: 758.4 bits (1957), Expect = 3.2e-215
Identity = 369/416 (88.70%), Postives = 390/416 (93.75%), Query Frame = 0
Query: 1 MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
MNLLLSTH HCLPITQ+ +H PFNN PHVRT T +N ANL VAHQ+FD+IPIWDT
Sbjct: 1 MNLLLSTHVHCLPITQETSH----RQPFNNPPHVRTTTAKNSANLSVAHQLFDEIPIWDT 60
Query: 61 FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
FAWNNLIQTHLTNGDLGHVISTY+QMLFRGVRPDKHTLPRIICATRQYG+LQ GKQLHAQ
Sbjct: 61 FAWNNLIQTHLTNGDLGHVISTYQQMLFRGVRPDKHTLPRIICATRQYGNLQFGKQLHAQ 120
Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
AFKLGFSSNLYVLTSLIE YGILDSADTAKWLHDKS CRNSVSWT+LAKLYL EDKPS A
Sbjct: 121 AFKLGFSSNLYVLTSLIEFYGILDSADTAKWLHDKSACRNSVSWTMLAKLYLMEDKPSCA 180
Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
+DLFYQMVELADDIDAVALATAIGACGALKML HGRNIH LAR+HGLEFN+LVSNSLLKM
Sbjct: 181 IDLFYQMVELADDIDAVALATAIGACGALKMLQHGRNIHLLARIHGLEFNVLVSNSLLKM 240
Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
Y+DCDSIKDARGFFD+MPSKD+ISWTELIHMYVKKGGINEAFKLFRQMN DG LKPDP T
Sbjct: 241 YLDCDSIKDARGFFDRMPSKDVISWTELIHMYVKKGGINEAFKLFRQMNKDGGLKPDPLT 300
Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
ISSILPACGRMAAHKHGKEIHGYV+KNAFDENLIVQNALVDMYVKSGCIQSAS+TFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVLKNAFDENLIVQNALVDMYVKSGCIQSASETFSMMK 360
Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKM-RRDEITYTAVLHACTTANM 416
EKDMVSW+IMTLGYSLHGQGKLGVSLFRE+E+N +M RD+ITYTAVLHACTTANM
Sbjct: 361 EKDMVSWTIMTLGYSLHGQGKLGVSLFREIERNLRMHNRDQITYTAVLHACTTANM 412
BLAST of CsaV3_3G032890 vs. NCBI nr
Match:
XP_023539701.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 716.1 bits (1847), Expect = 1.8e-202
Identity = 338/418 (80.86%), Postives = 376/418 (89.95%), Query Frame = 0
Query: 1 MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
MNLLLST H LP+TQKPNH YHRH FNN PHVRT T E A+LCVAHQ+FDDIPIWDT
Sbjct: 1 MNLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
Query: 61 FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
FAWNNLIQTHLT+GD+GHVISTY+QML RGVRPD HTLPR+ICA+R YGDLQ+GKQLHAQ
Sbjct: 61 FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
AFKLG SNLYV TSLIELYGILDSADTA+WLHDKS CRN+VSWT+LAKLYL EDKPS +
Sbjct: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
+DLFYQMVELA DIDAVALATA+GACGA K+L HGRNIHH+AR+HGLEF++LVSN LLKM
Sbjct: 181 IDLFYQMVELAADIDAVALATALGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240
Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
Y+DC SIKDARG F++MP +DIISWT+LIH YVK GGINEA KLFRQMNMDGELKPDP T
Sbjct: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
ISSILPACGR+AAHKHG+EIHGYV+KN FD+NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRIAAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRD 419
EKDMVSW++M GYSLHGQGKLGV LFREM++NF++ RDEITYTAVL AC+TA+M +
Sbjct: 361 EKDMVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQACSTASMVEE 418
BLAST of CsaV3_3G032890 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 233.0 bits (593), Expect = 6.2e-60
Identity = 120/368 (32.61%), Postives = 201/368 (54.62%), Query Frame = 0
Query: 48 AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 107
A +VFD++ D +WN++I +++NG +S + QML G+ D T+ +
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD 308
Query: 108 YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVL 167
+ +G+ +H+ K FS +L+++Y D+AK + + + R+ VS+T +
Sbjct: 309 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSM 368
Query: 168 AKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGL 227
Y RE A+ LF +M E D + + C ++L G+ +H + + L
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428
Query: 228 EFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQ 287
F+I VSN+L+ MY C S+++A F +M KDIISW +I Y K NEA LF
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488
Query: 288 MNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSG 347
+ + PD RT++ +LPAC ++A G+EIHGY+++N + + V N+LVDMY K G
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548
Query: 348 CIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVL 407
+ A F + KD+VSW++M GY +HG GK ++LF +M + + DEI++ ++L
Sbjct: 549 ALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADEISFVSLL 608
Query: 408 HACTTANM 416
+AC+ + +
Sbjct: 609 YACSHSGL 615
BLAST of CsaV3_3G032890 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 224.2 bits (570), Expect = 2.9e-57
Identity = 119/380 (31.32%), Postives = 206/380 (54.21%), Query Frame = 0
Query: 41 NYANLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPR 100
++ ++ A QVFDD+P F WN +I+ + N + Y M V PD T P
Sbjct: 65 SFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPH 124
Query: 101 IICATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTC-- 160
++ A LQ+G+ +HAQ F+LGF ++++V LI LY +A+ + +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 161 RNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNI 220
R VSWT + Y + +P AL++F QM ++ D VAL + + A L+ L GR+I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 221 HHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGI 280
H GLE + SL MY C + A+ FD+M S ++I W +I Y K G
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 281 NEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNA 340
EA +F +M ++ +++PD +I+S + AC ++ + + + ++ YV ++ + +++ + +A
Sbjct: 305 REAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 364
Query: 341 LVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRR 400
L+DM+ K G ++ A F ++D+V WS M +GY LHG+ + +SL+R ME+ +
Sbjct: 365 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG-GVHP 424
Query: 401 DEITYTAVLHACTTANMFRD 419
+++T+ +L AC + M R+
Sbjct: 425 NDVTFLGLLMACNHSGMVRE 442
BLAST of CsaV3_3G032890 vs. ExPASy Swiss-Prot
Match:
Q9C507 (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)
HSP 1 Score: 209.5 bits (532), Expect = 7.3e-53
Identity = 110/370 (29.73%), Postives = 206/370 (55.68%), Query Frame = 0
Query: 44 NLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIIC 103
NL A +VFD +P+ D AW+ L+ + L NG++ + ++ M+ GV PD T+ ++
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210
Query: 104 ATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVS 163
+ G L++ + +H Q + F + + SL+ +Y +++ + +K +N+VS
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 164 WTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLAR 223
WT + Y R + AL F +M++ + + V L + + +CG + ++ G+++H A
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 224 VHGLEFNI-LVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAF 283
L+ N +S +L+++Y +C + D + ++I++W LI +Y +G + +A
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390
Query: 284 KLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDM 343
LFRQM + +KPD T++S + AC GK+IHG+V++ + VQN+L+DM
Sbjct: 391 GLFRQM-VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDM 450
Query: 344 YVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEIT 403
Y KSG + SAS F+ +K + +V+W+ M G+S +G +SLF M ++ + +E+T
Sbjct: 451 YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY-LEMNEVT 510
Query: 404 YTAVLHACTT 413
+ AV+ AC++
Sbjct: 511 FLAVIQACSS 517
BLAST of CsaV3_3G032890 vs. ExPASy Swiss-Prot
Match:
Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)
HSP 1 Score: 207.2 bits (526), Expect = 3.6e-52
Identity = 122/400 (30.50%), Postives = 200/400 (50.00%), Query Frame = 0
Query: 48 AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICA-TR 107
A+++F IP D WNN+I+ G + Y ML GV PD HT P ++ R
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 108 QYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTV 167
G L GK+LH K G SNLYV +L+++Y + D A+ + D+ + SW +
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 168 LAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHG 227
+ Y R + +++L +M +V L + AC +K + +H
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 228 LEFNILVSN-------------------------------SLLKMYIDCDSIKDARGFFD 287
E ++ + N S++K Y++ ++K AR +FD
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 288 QMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHK 347
QMP +D ISWT +I Y++ G NE+ ++FR+M G + PD T+ S+L AC + + +
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLE 386
Query: 348 HGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYS 407
G+ I Y+ KN +++V NAL+DMY K GC + A K F M ++D +W+ M +G +
Sbjct: 387 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA 446
Query: 408 LHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 416
+GQG+ + +F +M+ + ++ D+ITY VL AC + M
Sbjct: 447 NNGQGQEAIKVFFQMQ-DMSIQPDDITYLGVLSACNHSGM 484
BLAST of CsaV3_3G032890 vs. ExPASy Swiss-Prot
Match:
O49619 (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H27 PE=3 SV=1)
HSP 1 Score: 200.7 bits (509), Expect = 3.4e-50
Identity = 117/372 (31.45%), Postives = 204/372 (54.84%), Query Frame = 0
Query: 48 AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 107
A +VF+++P D +WN++I +L GD + +++ML G +PD+ + + A
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
Query: 108 YGDLQVGKQLHAQAFKLGF-SSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTV 167
++GK++H A + + ++ V+TS++++Y A+ + + RN V+W V
Sbjct: 244 VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303
Query: 168 LAKLYLREDKPSLALDLFYQMVE---LADDIDAVALATAIGACGALKMLHHGRNIHHLAR 227
+ Y R + + A F +M E L D+ T+I A +L GR IH A
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDV-----ITSINLLPASAIL-EGRTIHGYAM 363
Query: 228 VHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFK 287
G ++++ +L+ MY +C +K A FD+M K++ISW +I YV+ G A +
Sbjct: 364 RRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 423
Query: 288 LFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMY 347
LF+++ D L PD TI+SILPA + G+EIH Y+VK+ + N I+ N+LV MY
Sbjct: 424 LFQEL-WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 483
Query: 348 VKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITY 407
G ++ A K F+ + KD+VSW+ + + Y++HG G++ V LF EM + ++ ++ T+
Sbjct: 484 AMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS-RVNPNKSTF 543
Query: 408 TAVLHACTTANM 416
++L AC+ + M
Sbjct: 544 ASLLAACSISGM 547
BLAST of CsaV3_3G032890 vs. ExPASy TrEMBL
Match:
A0A0A0L9N4 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G722890 PE=3 SV=1)
HSP 1 Score: 857.1 bits (2213), Expect = 3.2e-245
Identity = 415/415 (100.00%), Postives = 415/415 (100.00%), Query Frame = 0
Query: 1 MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT
Sbjct: 1 MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
Query: 61 FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ
Sbjct: 61 FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA
Sbjct: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM
Sbjct: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT
Sbjct: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 416
EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 415
BLAST of CsaV3_3G032890 vs. ExPASy TrEMBL
Match:
A0A1S3CPR5 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103502829 PE=3 SV=1)
HSP 1 Score: 822.8 bits (2124), Expect = 6.7e-235
Identity = 394/415 (94.94%), Postives = 404/415 (97.35%), Query Frame = 0
Query: 1 MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
MNLLLSTHTHCLPITQKP HAYHRHPPFNNLPHVRT TVENYA+LCVAHQVFD+IPIWDT
Sbjct: 1 MNLLLSTHTHCLPITQKPYHAYHRHPPFNNLPHVRTTTVENYADLCVAHQVFDEIPIWDT 60
Query: 61 FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
FAWNNLIQTHLTNGD GHVIS YRQMLFRGVRPDKHTLPRIICATRQYGDL VGKQLHAQ
Sbjct: 61 FAWNNLIQTHLTNGDWGHVISIYRQMLFRGVRPDKHTLPRIICATRQYGDLPVGKQLHAQ 120
Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
AFKLGFSS+LYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWT+LAKLYLREDKPS A
Sbjct: 121 AFKLGFSSDLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTILAKLYLREDKPSFA 180
Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
+DLFYQMVELADDID+VALATAIGACGALKMLHHGRNIHHLAR+HGLEFNILVSNSLLKM
Sbjct: 181 IDLFYQMVELADDIDSVALATAIGACGALKMLHHGRNIHHLARIHGLEFNILVSNSLLKM 240
Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
Y+DCDSIKDARGFFDQMPSKD+ISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDP T
Sbjct: 241 YLDCDSIKDARGFFDQMPSKDVISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPLT 300
Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
ISSILPACGRMAAHKHGKEIHGYV+KN FDENLIVQNALVDMYVKSGCIQSASKTFSMMK
Sbjct: 301 ISSILPACGRMAAHKHGKEIHGYVLKNGFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 416
EKDMVSWSIMTLGYSLHGQGKLGV LFREMEKN KM RDEITYTAVLHACTTANM
Sbjct: 361 EKDMVSWSIMTLGYSLHGQGKLGVGLFREMEKNLKMHRDEITYTAVLHACTTANM 415
BLAST of CsaV3_3G032890 vs. ExPASy TrEMBL
Match:
A0A6J1I9E1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111470851 PE=3 SV=1)
HSP 1 Score: 714.5 bits (1843), Expect = 2.6e-202
Identity = 338/418 (80.86%), Postives = 376/418 (89.95%), Query Frame = 0
Query: 1 MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
M+LLLST H LP+TQKPNH YHRH FNN PHVRT T E A+LCVAHQ+FDDIPIWDT
Sbjct: 1 MDLLLSTPIHRLPLTQKPNHTYHRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
Query: 61 FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
FAWNNLIQTHLT+GD+GHVISTY+QML RGVRPD HTLPR+ICA+R YGDLQ+GKQLHAQ
Sbjct: 61 FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
AFKLG SNLYV TSLIELYGILDSADTA+WLHDKS CRN+VSWT+LAKLYL EDKPS +
Sbjct: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
LDLFYQMVELA DIDAVALATAIGACGA K+L HGRNIHH+AR+HGLEF++LVSN LLKM
Sbjct: 181 LDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDVLVSNCLLKM 240
Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
Y+DC SIKDARG F++MP +DIISWT+LIH YVK GGINEA KLFRQMNMDGELKPDP T
Sbjct: 241 YLDCSSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
ISSILPACGR+AAHKHG+EIHGYV+KN FD+NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRIAAHKHGREIHGYVLKNDFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRD 419
EKDMVSW++M GYSLHGQGKLGV LFREM++NF++ RDEITYTAVL +C+TA+M +
Sbjct: 361 EKDMVSWTVMISGYSLHGQGKLGVGLFREMDRNFRVHRDEITYTAVLQSCSTASMVEE 418
BLAST of CsaV3_3G032890 vs. ExPASy TrEMBL
Match:
A0A6J1EXC6 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111439085 PE=3 SV=1)
HSP 1 Score: 707.6 bits (1825), Expect = 3.2e-200
Identity = 336/418 (80.38%), Postives = 373/418 (89.23%), Query Frame = 0
Query: 1 MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
M+LLLST H LP+TQKPNH Y RH FNN PHVRT T E A+LCVAHQ+FDDIPIWDT
Sbjct: 1 MDLLLSTPIHRLPLTQKPNHTYDRHRLFNNPPHVRTTTAEKNAHLCVAHQLFDDIPIWDT 60
Query: 61 FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
FAWNNLIQTHLT+GD+GHVISTY+QML RGVRPD HTLPR+ICA+R YGDLQ+GKQLHAQ
Sbjct: 61 FAWNNLIQTHLTSGDVGHVISTYQQMLSRGVRPDNHTLPRVICASRHYGDLQLGKQLHAQ 120
Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
AFKLG SNLYV TSLIELYGILDSADTA+WLHDKS CRN+VSWT+LAKLYL EDKPS +
Sbjct: 121 AFKLGLFSNLYVFTSLIELYGILDSADTARWLHDKSACRNAVSWTMLAKLYLMEDKPSFS 180
Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
+DLFYQMVELA DIDAVALATAIGACGA K+L HGRNIHH+AR+HGLEF+ILVSN LLKM
Sbjct: 181 IDLFYQMVELAADIDAVALATAIGACGARKLLQHGRNIHHVARIHGLEFDILVSNCLLKM 240
Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
Y+DC SIKDARG F++MP +DIISWT+LIH YVK GGINEA KLFRQMNMDGELKPDP T
Sbjct: 241 YLDCGSIKDARGLFNRMPFRDIISWTDLIHFYVKNGGINEALKLFRQMNMDGELKPDPLT 300
Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
ISSILPACGR+ AHKHG+EIHGYV+KN FD+NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRITAHKHGREIHGYVLKNYFDDNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRD 419
EKDMVSW+++ GYSLHGQGKLGV LFREM++NF + RDEITYTAVL AC+TA+M +
Sbjct: 361 EKDMVSWTVVISGYSLHGQGKLGVGLFREMDRNFSVHRDEITYTAVLQACSTASMVEE 418
BLAST of CsaV3_3G032890 vs. ExPASy TrEMBL
Match:
A0A6J1E0A4 (pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111025202 PE=3 SV=1)
HSP 1 Score: 694.1 bits (1790), Expect = 3.6e-196
Identity = 336/418 (80.38%), Postives = 367/418 (87.80%), Query Frame = 0
Query: 1 MNLLLSTHTHCLPITQKPNHAYHRHPPFNNLPHVRTMTVENYANLCVAHQVFDDIPIWDT 60
M+LLLSTH LPIT K + Y R PFNN PHVRT ENYANLC AH FD+IP WDT
Sbjct: 1 MDLLLSTHFRRLPITPKTDLTYRRRRPFNNPPHVRTAITENYANLCEAHHPFDEIPTWDT 60
Query: 61 FAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHAQ 120
FAWNNLIQTHLTNGD+G VISTY QML RGVRPD HTLPRII A+RQ GDLQVGKQLHAQ
Sbjct: 61 FAWNNLIQTHLTNGDVGLVISTYEQMLLRGVRPDNHTLPRIIGASRQCGDLQVGKQLHAQ 120
Query: 121 AFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVLAKLYLREDKPSLA 180
FKLGFSSNLYV+TSLIELYGILD ADTAKWLHDKS CRNSVSWT+LAKLY+ EDKPS A
Sbjct: 121 VFKLGFSSNLYVITSLIELYGILDGADTAKWLHDKSACRNSVSWTMLAKLYVMEDKPSFA 180
Query: 181 LDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKM 240
+DLFYQMVELA DIDAVALATAIGACG+LK+L HGRNIH LAR HGLEF++LVSNSLLKM
Sbjct: 181 IDLFYQMVELAADIDAVALATAIGACGSLKLLQHGRNIHLLARTHGLEFDVLVSNSLLKM 240
Query: 241 YIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRT 300
Y+DC SI+DARGFF++MPSKD+ISWTELI YVKKGGINE FKLFRQMNMDG LKPDP T
Sbjct: 241 YLDCGSIRDARGFFNRMPSKDVISWTELIQAYVKKGGINEGFKLFRQMNMDGGLKPDPIT 300
Query: 301 ISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK 360
ISSILPACGRMAAHKHG+EIHGYV+K+A D NLIVQNALVDMYVKSGCIQSA K FS MK
Sbjct: 301 ISSILPACGRMAAHKHGREIHGYVLKSAIDVNLIVQNALVDMYVKSGCIQSALKIFSRMK 360
Query: 361 EKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMFRD 419
EKD +SW++M LGYSLHGQGKLGVSLFR ME+N +M RDEITYT+VLHAC+TA++ +
Sbjct: 361 EKDAISWTVMILGYSLHGQGKLGVSLFRLMERNLRMHRDEITYTSVLHACSTASLVEE 418
BLAST of CsaV3_3G032890 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 233.0 bits (593), Expect = 4.4e-61
Identity = 120/368 (32.61%), Postives = 201/368 (54.62%), Query Frame = 0
Query: 48 AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 107
A +VFD++ D +WN++I +++NG +S + QML G+ D T+ +
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD 308
Query: 108 YGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTVL 167
+ +G+ +H+ K FS +L+++Y D+AK + + + R+ VS+T +
Sbjct: 309 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSM 368
Query: 168 AKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGL 227
Y RE A+ LF +M E D + + C ++L G+ +H + + L
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428
Query: 228 EFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFRQ 287
F+I VSN+L+ MY C S+++A F +M KDIISW +I Y K NEA LF
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488
Query: 288 MNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSG 347
+ + PD RT++ +LPAC ++A G+EIHGY+++N + + V N+LVDMY K G
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548
Query: 348 CIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVL 407
+ A F + KD+VSW++M GY +HG GK ++LF +M + + DEI++ ++L
Sbjct: 549 ALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADEISFVSLL 608
Query: 408 HACTTANM 416
+AC+ + +
Sbjct: 609 YACSHSGL 615
BLAST of CsaV3_3G032890 vs. TAIR 10
Match:
AT3G12770.1 (mitochondrial editing factor 22 )
HSP 1 Score: 224.2 bits (570), Expect = 2.0e-58
Identity = 119/380 (31.32%), Postives = 206/380 (54.21%), Query Frame = 0
Query: 41 NYANLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPR 100
++ ++ A QVFDD+P F WN +I+ + N + Y M V PD T P
Sbjct: 65 SFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPH 124
Query: 101 IICATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTC-- 160
++ A LQ+G+ +HAQ F+LGF ++++V LI LY +A+ + +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 161 RNSVSWTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNI 220
R VSWT + Y + +P AL++F QM ++ D VAL + + A L+ L GR+I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 221 HHLARVHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGI 280
H GLE + SL MY C + A+ FD+M S ++I W +I Y K G
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 281 NEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNA 340
EA +F +M ++ +++PD +I+S + AC ++ + + + ++ YV ++ + +++ + +A
Sbjct: 305 REAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 364
Query: 341 LVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRR 400
L+DM+ K G ++ A F ++D+V WS M +GY LHG+ + +SL+R ME+ +
Sbjct: 365 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG-GVHP 424
Query: 401 DEITYTAVLHACTTANMFRD 419
+++T+ +L AC + M R+
Sbjct: 425 NDVTFLGLLMACNHSGMVRE 442
BLAST of CsaV3_3G032890 vs. TAIR 10
Match:
AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 209.5 bits (532), Expect = 5.2e-54
Identity = 110/370 (29.73%), Postives = 206/370 (55.68%), Query Frame = 0
Query: 44 NLCVAHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIIC 103
NL A +VFD +P+ D AW+ L+ + L NG++ + ++ M+ GV PD T+ ++
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210
Query: 104 ATRQYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVS 163
+ G L++ + +H Q + F + + SL+ +Y +++ + +K +N+VS
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 164 WTVLAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLAR 223
WT + Y R + AL F +M++ + + V L + + +CG + ++ G+++H A
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 224 VHGLEFNI-LVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAF 283
L+ N +S +L+++Y +C + D + ++I++W LI +Y +G + +A
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390
Query: 284 KLFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDM 343
LFRQM + +KPD T++S + AC GK+IHG+V++ + VQN+L+DM
Sbjct: 391 GLFRQM-VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDM 450
Query: 344 YVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEIT 403
Y KSG + SAS F+ +K + +V+W+ M G+S +G +SLF M ++ + +E+T
Sbjct: 451 YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY-LEMNEVT 510
Query: 404 YTAVLHACTT 413
+ AV+ AC++
Sbjct: 511 FLAVIQACSS 517
BLAST of CsaV3_3G032890 vs. TAIR 10
Match:
AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 207.2 bits (526), Expect = 2.6e-53
Identity = 122/400 (30.50%), Postives = 200/400 (50.00%), Query Frame = 0
Query: 48 AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICA-TR 107
A+++F IP D WNN+I+ G + Y ML GV PD HT P ++ R
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 108 QYGDLQVGKQLHAQAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTV 167
G L GK+LH K G SNLYV +L+++Y + D A+ + D+ + SW +
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 168 LAKLYLREDKPSLALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHG 227
+ Y R + +++L +M +V L + AC +K + +H
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 228 LEFNILVSN-------------------------------SLLKMYIDCDSIKDARGFFD 287
E ++ + N S++K Y++ ++K AR +FD
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 288 QMPSKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAAHK 347
QMP +D ISWT +I Y++ G NE+ ++FR+M G + PD T+ S+L AC + + +
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLE 386
Query: 348 HGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYS 407
G+ I Y+ KN +++V NAL+DMY K GC + A K F M ++D +W+ M +G +
Sbjct: 387 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA 446
Query: 408 LHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANM 416
+GQG+ + +F +M+ + ++ D+ITY VL AC + M
Sbjct: 447 NNGQGQEAIKVFFQMQ-DMSIQPDDITYLGVLSACNHSGM 484
BLAST of CsaV3_3G032890 vs. TAIR 10
Match:
AT4G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 200.7 bits (509), Expect = 2.4e-51
Identity = 117/372 (31.45%), Postives = 204/372 (54.84%), Query Frame = 0
Query: 48 AHQVFDDIPIWDTFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQ 107
A +VF+++P D +WN++I +L GD + +++ML G +PD+ + + A
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
Query: 108 YGDLQVGKQLHAQAFKLGF-SSNLYVLTSLIELYGILDSADTAKWLHDKSTCRNSVSWTV 167
++GK++H A + + ++ V+TS++++Y A+ + + RN V+W V
Sbjct: 244 VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303
Query: 168 LAKLYLREDKPSLALDLFYQMVE---LADDIDAVALATAIGACGALKMLHHGRNIHHLAR 227
+ Y R + + A F +M E L D+ T+I A +L GR IH A
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDV-----ITSINLLPASAIL-EGRTIHGYAM 363
Query: 228 VHGLEFNILVSNSLLKMYIDCDSIKDARGFFDQMPSKDIISWTELIHMYVKKGGINEAFK 287
G ++++ +L+ MY +C +K A FD+M K++ISW +I YV+ G A +
Sbjct: 364 RRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 423
Query: 288 LFRQMNMDGELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMY 347
LF+++ D L PD TI+SILPA + G+EIH Y+VK+ + N I+ N+LV MY
Sbjct: 424 LFQEL-WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 483
Query: 348 VKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITY 407
G ++ A K F+ + KD+VSW+ + + Y++HG G++ V LF EM + ++ ++ T+
Sbjct: 484 AMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS-RVNPNKSTF 543
Query: 408 TAVLHACTTANM 416
++L AC+ + M
Sbjct: 544 ASLLAACSISGM 547
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAE8650963.1 | 1.5e-252 | 100.00 | hypothetical protein Csa_002291 [Cucumis sativus] | [more] |
XP_004137884.2 | 6.7e-245 | 100.00 | pentatricopeptide repeat-containing protein DOT4, chloroplastic [Cucumis sativus... | [more] |
XP_008465161.1 | 1.4e-234 | 94.94 | PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like ... | [more] |
XP_038905218.1 | 3.2e-215 | 88.70 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like isoform X1 ... | [more] |
XP_023539701.1 | 1.8e-202 | 80.86 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q9SN39 | 6.2e-60 | 32.61 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Q9LTV8 | 2.9e-57 | 31.32 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
Q9C507 | 7.3e-53 | 29.73 | Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS... | [more] |
Q9LSB8 | 3.6e-52 | 30.50 | Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... | [more] |
O49619 | 3.4e-50 | 31.45 | Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L9N4 | 3.2e-245 | 100.00 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G7228... | [more] |
A0A1S3CPR5 | 6.7e-235 | 94.94 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucumis ... | [more] |
A0A6J1I9E1 | 2.6e-202 | 80.86 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbit... | [more] |
A0A6J1EXC6 | 3.2e-200 | 80.38 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Cucurbit... | [more] |
A0A6J1E0A4 | 3.6e-196 | 80.38 | pentatricopeptide repeat-containing protein DOT4, chloroplastic-like OS=Momordic... | [more] |
Match Name | E-value | Identity | Description | |
AT4G18750.1 | 4.4e-61 | 32.61 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G12770.1 | 2.0e-58 | 31.32 | mitochondrial editing factor 22 | [more] |
AT1G69350.1 | 5.2e-54 | 29.73 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G15930.1 | 2.6e-53 | 30.50 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G35130.1 | 2.4e-51 | 31.45 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |