CsaV3_3G031810 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTCCAGCCCTCGTCACTCAAGGAGTGACAGGAAAACCTTCTGCAGCAGAATCTGCTAATGTCCAACAACAGCAAGGTCAACAGTTTGCACCACAAGCCAGCCAGACTCCAGTACAAAGTCTTTCTAATGGCCAGCCTAATCAATTAAACAGAAATGCAATGTCTTTGCCTCAAGGAATATCTAG GTTCCAGCCCTCGTCACTCAAGGAGTGACAGGAAAACCTTCTGCAGCAGAATCTGCTAATGTCCAACAACAGCAAGGTCAACAGTTTGCACCACAAGCCAGCCAGACTCCAGTACAAAGTCTTTCTAATGGCCAGCCTAATCAATTAAACAGAAATGCAATGTCTTTGCCTCAAGGAATATCTAG GTTCCAGCCCTCGTCACTCAAGGAGTGACAGGAAAACCTTCTGCAGCAGAATCTGCTAATGTCCAACAACAGCAAGGTCAACAGTTTGCACCACAAGCCAGCCAGACTCCAGTACAAAGTCTTTCTAATGGCCAGCCTAATCAATTAAACAGAAATGCAATGTCTTTGCCTCAAGGAATATCTAG VPALVTQGVTGKPSAAESANVQQQQGQQFAPQASQTPVQSLSNGQPNQLNRNAMSLPQGISX Homology
BLAST of CsaV3_3G031810 vs. NCBI nr
Match: KAE8650922.1 (hypothetical protein Csa_000835, partial [Cucumis sativus]) HSP 1 Score: 113.6 bits (283), Expect = 6.0e-22 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of CsaV3_3G031810 vs. NCBI nr
Match: XP_004141524.1 (30-kDa cleavage and polyadenylation specificity factor 30 [Cucumis sativus] >KGN52613.1 hypothetical protein Csa_008573 [Cucumis sativus]) HSP 1 Score: 106.7 bits (265), Expect = 7.4e-20 Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of CsaV3_3G031810 vs. NCBI nr
Match: XP_008459517.1 (PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30-like [Cucumis melo]) HSP 1 Score: 104.8 bits (260), Expect = 2.8e-19 Identity = 56/61 (91.80%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of CsaV3_3G031810 vs. NCBI nr
Match: TYK00526.1 (30-kDa cleavage and polyadenylation specificity factor 30-like [Cucumis melo var. makuwa]) HSP 1 Score: 104.8 bits (260), Expect = 2.8e-19 Identity = 56/61 (91.80%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of CsaV3_3G031810 vs. NCBI nr
Match: KAA0039343.1 (30-kDa cleavage and polyadenylation specificity factor 30-like [Cucumis melo var. makuwa]) HSP 1 Score: 104.8 bits (260), Expect = 2.8e-19 Identity = 56/61 (91.80%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of CsaV3_3G031810 vs. ExPASy TrEMBL
Match: A0A0A0KSR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647360 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.6e-20 Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of CsaV3_3G031810 vs. ExPASy TrEMBL
Match: A0A5D3BQI0 (30-kDa cleavage and polyadenylation specificity factor 30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001360 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.4e-19 Identity = 56/61 (91.80%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of CsaV3_3G031810 vs. ExPASy TrEMBL
Match: A0A5A7T8Q5 (30-kDa cleavage and polyadenylation specificity factor 30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001410 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.4e-19 Identity = 56/61 (91.80%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of CsaV3_3G031810 vs. ExPASy TrEMBL
Match: A0A1S3CAV8 (30-kDa cleavage and polyadenylation specificity factor 30-like OS=Cucumis melo OX=3656 GN=LOC103498632 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.4e-19 Identity = 56/61 (91.80%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of CsaV3_3G031810 vs. ExPASy TrEMBL
Match: A0A5D3C2W1 (30-kDa cleavage and polyadenylation specificity factor 30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00560 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.9e-13 Identity = 48/60 (80.00%), Postives = 50/60 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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