CsaV3_3G021700 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G021700
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	ATP-dependent Clp protease proteolytic subunit
Location	chr3: 18847044 .. 18850754 (-)
RNA-Seq Expression	CsaV3_3G021700
Synteny	CsaV3_3G021700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCAATCAATAGCGTTTTTATTATTTTTGAAATTGTTTTATACCTATCAATATTTTGACCATTTTTTAAAACACACCCAATAAAATTCAAACAAGATTGGAAAAGTAAGATTACAATTTAACGTAACATTAAAAGTGATTTTTCCCCTTCTTTTGTTACGATTGATGAAGTAAATTTGGGGGAAAATACTCTTTATATTGGTAGAGCAGCCCAATCTTTGGATTTCTTGTGGGTGCTTCCCCTTCTGCTCTCAATAGCGAAAATGGAGTTGAGTTTCACACACGCACCTTCTCCTTCCCCTTATGGGCTTAAGCGTTCTGACCATGGATTTCAGTCTTCTCATTTTCCAATTTCTACTCCTTCCAAGCACTCCCATGGCGGCAATTTCACTTCTAATGCTTTTAGAATCAGAAATTGTTCGGTTCCGGTTGTAAACCACCCCTCGCATAGTTCCTCTTCTCTTAGACGCACCTTATCCAGTAATTGGGATGTTTTTAGCAACTATTCTGTATCTTCCGCTCGATCCTTGCCTCGATTCGAAGAGCTTGACACTACCAATATGCTTCTCCGCCAGCGAATCATCTTCTTGGGCTCTCAGGCAATGTCTCCAACTATTTCCTCGTATTTCTTAATCAATTGGTTTGTTTCTACTTTCAGCGGTGTGTTGAATTCTGTTTAGCTTTTTTTAGGTTTGATTTTGTATTTGTTATATTGGGATTTTTGTTTGGATGGTTTGGGAGTTGTTTGAGTTGGAAGAAGAAGAGAGAATTTTTATTGGGACTTGAATATTGTATTGGGTACTGGCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAACTACTCTTTCTTGATGCTGAAGACCCAACAAAAGATATTAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGTATTTTCCGTCATCAAGTCCTTACATTCTTTTTTGTTTTTGTTTTTGTTTTTTGTTTTCAGACGGATAATTTTTAGTTTTAATTTGAAGTTGTTGGGTTGAAAGGATGCTGTCGTATAATCTTTATGGTTCAAATCTGCTTCCCACAGTATTCACGCCCTTCATTCTTTTATGATGGTTTTAGTACTCCTTGTTGCTCCAAACTGCTTGTGCGTGAGAGTGTAAAGTAAGTTACATAATCCAATATTTGGTACGCAAATGAGTTCAAGTGCCTTCTGTGTTGATCACGTGCATCAAAATAAACACATTCCAAAGTTTGGAATCATTGAAATATTTGAGAAATGACTTCATTATTCTCACTTCGGAAGTAGCTTGGGATCTGTCATTCTAAGTCAGGATCATAATCCATCAAGTTGTGAGACAAGAGCTTCTGTTATTCTATCGAATTACATTTCATCTTATGGTATTTTAACCAAGTTATTCTATATATATAGACACAGAGAGAGATGGAGAGAAGGAAACAATACAAAAGCAGACTAAAAGCCAAGTACACAAAAACCTCACTAAAGAAAGGTGCTCCAACTCAGTAAAATGTTGCCTAATGAATAATTACAAAAAGTCTTTGAAATTGAAGCCCATGAAAAGAAAGAGCTCCAGCGAGTCATTACGTTTTAGCACTATGGTTGTAACTTTTTTGATCGATGAAAATTATATTATATGGTATGTAGTGTGGCAATCATGGGGCAAGATTCCGGATGATATGCATATAGCCTGATTCAAGTTCAATTCAAATGATAATCTGTAAAGTATTTTCTGATTAGGAGGTTGCACAAACAGATCTCTGGTGTGGGGTTTGTTTTTTTCATTCAACATAATAATGATATTATAAATTATTTTGCAACGGCCCTTAGTTTTCCTCCTGGTTTCCCTGTAATTCAGAAGATACTTCAGCAGATGAAGTCACCTACCCATCCATGCAATAACCTCTTTATTTCTCCTTACTGAAAACTGCCCTTCTTATGTTCGTTTATCTCTTGTGTGATGATCTCTCCCTTCAATTATTTCAAGGCAAATGGATCTTTGTATATCCACATCTTTTTGGTCTACCTCTATTGTTGTAGGTTGTTATTTCAATCCATGTTTGTTTCTCAAATTTTTTATTGAATGTAGGAATGGGAATATATGATGCAATGAAGTTATGCAAGGCCGATGTTTCAACCGTTTGTCTGGGACTTGCCGCATCCATGGGAGCATTTCTTCTAGCCTCTGGTTCAAAGGGAAAGCGATTTTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACTGCTGGAGGAAAAGTGAGTAGATTATTGTTCTGTGCTTTGCTGTTAAGTTAATGGCTTTTCCAGTCGCTCTTGAATGTGTGCAGCATTTCTAAAATTCTTTGTTCATAATGTTTAGTGCTTGCATTGGATGGTAGGGAGTTGAAAATCAATAAGCCTCATAATAGCTTTTATGAACTTGATTTATTTGCGTTGAATTTTTTGGTAAAGGGACACAGCTTTGGCTCCACAAATAAGAGCATGGAATGAAATTCAGGAGTTTTTCTGAAATTATCGATATTGGCTTTTGATCTATTTAATAATTAATTAGTTGATTTAAGCTTTCAATTATGGGAGAACGCCTAATCAATTCACTGGTTACCCCATCTATGCCAGGCAACAGAGATGAGCATTCGGATACGAGAAATGGCGTATCACAAGATTAAGCTAAACAAAATTTTTTCTAGAATCACTGGAAAGCCAATAGAGCAGGTTTGCCAATATATTACTTTAACTACTTGGTTCTCAATTTTGTAAAGAAACCCTTTAGTATTTGTTTGTCCTTTGCAGATTGAATTGGACACAGAACGTGATAATTTTATGAATCCTTGGGAAGCTAAGGAATATGGTTTGATCGATGAAGTTATCGATGATGGGAAGCCTGGACTTATTGCTCCAATTGCAGAGGCAACTCCTCCTCCGAAAACTCGAATCTGGGATCTATGGAAGGTTGAAGGGAGTCGAAAAGCCAAGAAGAATTTGCCTTCAGAAAGCAAGATTTTGAAGAATGGATATGAAGAAGGGGGTCAAGGAAGTGACAAAGAGCGCGGTGGCCAGCAGGAAACAGAAGAACCAAGTCCTGTATGACACAGGACTCACCCTGTTCCTCTTCTTCCATCCCTCTGCCTCTATTGTTGTATCCGAGCTTGTTCTTTCCATTCTCAAATAGTTGTTTCTCTGTAAGATCTTAAGACGATTATTACCAATTTGTTAAACAGGCCTAGGTTTCGGAAAATTCAAGGGTCGTAACATTCCCTTTCTCTTCCCTTATCTAGACGCTAAAATATTGCTGGAGTCTGATATTGAATTTGTCTAGAAACCTTGGCTCAACGTTCAATGGGGAGCACCAATGACCATGTTTCTGAGTAAGTTGCTGCAACTTGGATGGAAGTTTGTATGAGTTTTGGCTGAGATTTGGATTAAGATGGAAGGCAGGTGATAATTTTGAATTCAAGGTTGTCATGCAATGCATTGCTAAATATTCTACATGATAGTTGGGGTAATTGCCTTCTATCCAACGTTTATTATTGAAGCTATTTGATGCATTTGCACTAATAGATGTTATTACCATCAATGTGTTTTTATATTTTTAAGAGGAAAAAAAATTAATTTTTTTAGTTTCATCAATTTCAAAATTTTAATTTATGTATATACACAATGCAGGATAGATTTTTTTTTTAAATGTCAATTGAGATATG

mRNA sequence

ATGGAGTTGAGTTTCACACACGCACCTTCTCCTTCCCCTTATGGGCTTAAGCGTTCTGACCATGGATTTCAGTCTTCTCATTTTCCAATTTCTACTCCTTCCAAGCACTCCCATGGCGGCAATTTCACTTCTAATGCTTTTAGAATCAGAAATTGTTCGGTTCCGGTTGTAAACCACCCCTCGCATAGTTCCTCTTCTCTTAGACGCACCTTATCCAGTAATTGGGATGTTTTTAGCAACTATTCTGTATCTTCCGCTCGATCCTTGCCTCGATTCGAAGAGCTTGACACTACCAATATGCTTCTCCGCCAGCGAATCATCTTCTTGGGCTCTCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAACTACTCTTTCTTGATGCTGAAGACCCAACAAAAGATATTAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTATGCAAGGCCGATGTTTCAACCGTTTGTCTGGGACTTGCCGCATCCATGGGAGCATTTCTTCTAGCCTCTGGTTCAAAGGGAAAGCGATTTTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACTGCTGGAGGAAAAGCAACAGAGATGAGCATTCGGATACGAGAAATGGCGTATCACAAGATTAAGCTAAACAAAATTTTTTCTAGAATCACTGGAAAGCCAATAGAGCAGATTGAATTGGACACAGAACGTGATAATTTTATGAATCCTTGGGAAGCTAAGGAATATGGTTTGATCGATGAAGTTATCGATGATGGGAAGCCTGGACTTATTGCTCCAATTGCAGAGGCAACTCCTCCTCCGAAAACTCGAATCTGGGATCTATGGAAGGTTGAAGGGAGTCGAAAAGCCAAGAAGAATTTGCCTTCAGAAAGCAAGATTTTGAAGAATGGATATGAAGAAGGGGGTCAAGGAAGTGACAAAGAGCGCGGTGGCCAGCAGGAAACAGAAGAACCAAGTCCTGTATGA

Coding sequence (CDS)

ATGGAGTTGAGTTTCACACACGCACCTTCTCCTTCCCCTTATGGGCTTAAGCGTTCTGACCATGGATTTCAGTCTTCTCATTTTCCAATTTCTACTCCTTCCAAGCACTCCCATGGCGGCAATTTCACTTCTAATGCTTTTAGAATCAGAAATTGTTCGGTTCCGGTTGTAAACCACCCCTCGCATAGTTCCTCTTCTCTTAGACGCACCTTATCCAGTAATTGGGATGTTTTTAGCAACTATTCTGTATCTTCCGCTCGATCCTTGCCTCGATTCGAAGAGCTTGACACTACCAATATGCTTCTCCGCCAGCGAATCATCTTCTTGGGCTCTCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAACTACTCTTTCTTGATGCTGAAGACCCAACAAAAGATATTAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTATGCAAGGCCGATGTTTCAACCGTTTGTCTGGGACTTGCCGCATCCATGGGAGCATTTCTTCTAGCCTCTGGTTCAAAGGGAAAGCGATTTTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACTGCTGGAGGAAAAGCAACAGAGATGAGCATTCGGATACGAGAAATGGCGTATCACAAGATTAAGCTAAACAAAATTTTTTCTAGAATCACTGGAAAGCCAATAGAGCAGATTGAATTGGACACAGAACGTGATAATTTTATGAATCCTTGGGAAGCTAAGGAATATGGTTTGATCGATGAAGTTATCGATGATGGGAAGCCTGGACTTATTGCTCCAATTGCAGAGGCAACTCCTCCTCCGAAAACTCGAATCTGGGATCTATGGAAGGTTGAAGGGAGTCGAAAAGCCAAGAAGAATTTGCCTTCAGAAAGCAAGATTTTGAAGAATGGATATGAAGAAGGGGGTCAAGGAAGTGACAAAGAGCGCGGTGGCCAGCAGGAAACAGAAGAACCAAGTCCTGTATGA

Protein sequence

MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHPSHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV*

Homology

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BLAST of CsaV3_3G021700 vs. NCBI nr
Match: XP_011651427.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis sativus] >KGN57884.1 hypothetical protein Csa_010181 [Cucumis sativus])

HSP 1 Score: 677.6 bits (1747), Expect = 5.8e-191
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0


Query: 1   MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP 60
           MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP
Sbjct: 1   MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP 60

Query: 61  SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF 120
           SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF
Sbjct: 61  SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF 120

Query: 121 IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL 180
           IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL
Sbjct: 121 IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL 180

Query: 181 LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE 240
           LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE
Sbjct: 181 LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE 240

Query: 241 QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK 300
           QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK
Sbjct: 241 QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK 300

Query: 301 AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
           AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV
Sbjct: 301 AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 339

[Close]

BLAST of CsaV3_3G021700 vs. NCBI nr
Match: XP_008457103.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis melo])

HSP 1 Score: 627.9 bits (1618), Expect = 5.2e-176
Identity = 317/340 (93.24%), Postives = 326/340 (95.88%), Query Frame = 0


Query: 1   MELSFTHAPSPSPYGLKRSDHGF-QSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNH 60
           MELSFTHAPSPSPYGLKR DHG   SSH PISTPS HSHG NFTSN FRIRNCSVPV+NH
Sbjct: 1   MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNH 60

Query: 61  PSHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120
           PS SSSSLRRTLSSNWDV SNYS SSA SLPRFEELDTTNMLLRQRIIFLGSQVDD+TAD
Sbjct: 61  PSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQVDDVTAD 120

Query: 121 FIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAF 180
           FIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAF
Sbjct: 121 FIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAF 180

Query: 181 LLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPI 240
           LLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP+
Sbjct: 181 LLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL 240

Query: 241 EQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSR 300
           EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTR+WDLWKVEGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR 300

Query: 301 KAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
           KAKKNLPSESKILKNGY +GG+GSD+ERG QQETEEPSPV
Sbjct: 301 KAKKNLPSESKILKNGY-QGGEGSDEERGSQQETEEPSPV 339

[Close]

BLAST of CsaV3_3G021700 vs. NCBI nr
Match: KAA0060718.1 (ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa] >TYK01461.1 ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa])

HSP 1 Score: 609.8 bits (1571), Expect = 1.5e-170
Identity = 317/376 (84.31%), Postives = 326/376 (86.70%), Query Frame = 0


Query: 1   MELSFTHAPSPSPYGLKRSDHGF-QSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNH 60
           MELSFTHAPSPSPYGLKR DHG   SSH PISTPS HSHG NFTSN FRIRNCSVPV+NH
Sbjct: 1   MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNH 60

Query: 61  PSHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGS-------- 120
           PS SSSSLRRTLSSNWDV SNYS SSA SLPRFEELDTTNMLLRQRIIFLGS        
Sbjct: 61  PSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQAMSPTIS 120

Query: 121 ----------------------------QVDDMTADFIISQLLFLDAEDPTKDIKLFINS 180
                                       QVDD+TADFIISQLLFLDAEDPTKDIKLFINS
Sbjct: 121 SYFLITCCLSWKKKRGFLLGLEYCIGYWQVDDVTADFIISQLLFLDAEDPTKDIKLFINS 180

Query: 181 PGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPL 240
           PGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPL
Sbjct: 181 PGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPL 240

Query: 241 GTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLI 300
           GTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP+EQIELDT+RDNFMNPWEAKEYGLI
Sbjct: 241 GTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI 300

Query: 301 DEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEGGQGS 340
           DEVIDDGKPGLIAPIAEATPPPKTR+WDLWKVEGSRKAKKNLPSESKILKNGY +GG+GS
Sbjct: 301 DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGY-QGGEGS 360

[Close]

BLAST of CsaV3_3G021700 vs. NCBI nr
Match: XP_038902354.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 593.6 bits (1529), Expect = 1.1e-165
Identity = 304/339 (89.68%), Postives = 318/339 (93.81%), Query Frame = 0


Query: 1   MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP 60
           MELSFT+APS SP+ L R DHG  SS+FPIS PSKHSHGGN TSNAFRIRN SVPVVN P
Sbjct: 1   MELSFTYAPSSSPHRLMRIDHGLPSSYFPISIPSKHSHGGNSTSNAFRIRN-SVPVVN-P 60

Query: 61  SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF 120
           S +SSSLRRTLSS+WDV  NYS SSA SLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF
Sbjct: 61  SFNSSSLRRTLSSSWDVLDNYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF 120

Query: 121 IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL 180
           IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFL
Sbjct: 121 IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFL 180

Query: 181 LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE 240
           LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREM YHKIKLNKIFSRITGKP+E
Sbjct: 181 LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMTYHKIKLNKIFSRITGKPLE 240

Query: 241 QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK 300
           QIELDT+RDNFMNPWEAK+YGLIDEVIDDGKPGLIAP AEATPPPKTR+WDLWKVEGSRK
Sbjct: 241 QIELDTDRDNFMNPWEAKDYGLIDEVIDDGKPGLIAPTAEATPPPKTRVWDLWKVEGSRK 300

Query: 301 AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
            KKNLPSE+KIL+NGY+E GQGSD+ERG QQETEE SPV
Sbjct: 301 TKKNLPSENKILQNGYQE-GQGSDEERGSQQETEETSPV 336

[Close]

BLAST of CsaV3_3G021700 vs. NCBI nr
Match: XP_022143418.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica charantia])

HSP 1 Score: 559.7 bits (1441), Expect = 1.7e-155
Identity = 288/339 (84.96%), Postives = 305/339 (89.97%), Query Frame = 0


Query: 1   MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP 60
           ME+SFT+ PSPSP  L R DHG  SS FP+ TP KHSHGGN + N  R    S P+V   
Sbjct: 1   MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPK-SAPLVK-A 60

Query: 61  SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF 120
           S SSSS+RRTLSSNWDV  N+S +SA SL RFEELDTTNMLLRQRIIFLGSQVDDMTADF
Sbjct: 61  SLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNMLLRQRIIFLGSQVDDMTADF 120

Query: 121 IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL 180
           IISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL
Sbjct: 121 IISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL 180

Query: 181 LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE 240
           LA+GSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP+E
Sbjct: 181 LAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLE 240

Query: 241 QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK 300
           QIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTR+WDLWKVEGSRK
Sbjct: 241 QIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRK 300

Query: 301 AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
           AKKNLPSE KIL+NGY +GGQG+D+ERG QQETEEPSPV
Sbjct: 301 AKKNLPSEDKILQNGY-QGGQGNDEERGTQQETEEPSPV 336

[Close]

BLAST of CsaV3_3G021700 vs. ExPASy Swiss-Prot
Match: Q9SXJ6 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP3 PE=1 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 2.4e-115
Identity = 215/279 (77.06%), Postives = 236/279 (84.59%), Query Frame = 0


Query: 47  FRIRNCSVPVVNHP--SHSSSSL----RRTLSSNWDV--FSNYSVSSARS-LPRFEELDT 106
           F IRN  +P  + P    SS SL    R+TLSSNWDV  FS  SV+ + S LP FEELDT
Sbjct: 27  FPIRNHRIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDT 86

Query: 107 TNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDA 166
           TNMLLRQRI+FLGSQVDDMTAD +ISQLL LDAED  +DI LFINSPGGS+TAGMGIYDA
Sbjct: 87  TNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDA 146

Query: 167 MKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRI 226
           MK CKADVSTVCLGLAASMGAFLLASGSKGKR+CMPN +VMIHQPLGTAGGKATEMSIRI
Sbjct: 147 MKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRI 206

Query: 227 REMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAP 286
           REM YHKIKLNKIFSRITGKP  +IE DT+RDNF+NPWEAKEYGLID VIDDGKPGLIAP
Sbjct: 207 REMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAP 266

Query: 287 IAEATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGY 317
           I + TPPPKT++WDLWKVEG++K   NLPSE  + +NGY
Sbjct: 267 IGDGTPPPKTKVWDLWKVEGTKKDNTNLPSERSMTQNGY 305

[Close]

BLAST of CsaV3_3G021700 vs. ExPASy Swiss-Prot
Match: Q8YXH5 (ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 7.8e-58
Identity = 111/173 (64.16%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 96  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIY 155
           D  + LLR+RI+FLG QVD   A+ I++QLLFLDAEDP KDI L+INSPGGSVTAGMGI+
Sbjct: 18  DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 77

Query: 156 DAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSI 215
           D MK  + DV T+C GLAASMGAFLL++G+KGKR  +P+ R+MIHQPLG A G+AT++ I
Sbjct: 78  DTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 137

Query: 216 RIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVID 269
           + RE+ YHK +LN   +  TG+PIE+I  DTERD FM+P EAK+YGLID+VID
Sbjct: 138 QAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLIDQVID 190

[Close]

BLAST of CsaV3_3G021700 vs. ExPASy Swiss-Prot
Match: Q3MFR5 (ATP-dependent Clp protease proteolytic subunit 1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.3e-57
Identity = 111/173 (64.16%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 96  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIY 155
           D  + LLR+RIIFLG QVD   A+ I++QLLFLDAEDP KDI L+INSPGGSVTAGMGI+
Sbjct: 18  DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 77

Query: 156 DAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSI 215
           D MK  + DV T+C GLAASMGAFLL++G+KGKR  +P+ R+MIHQPLG A G+AT++ I
Sbjct: 78  DTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 137

Query: 216 RIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVID 269
           + RE+ YHK +LN   +  TG+PIE+I  DTERD FM+P EA++YGLID+VID
Sbjct: 138 QAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDYGLIDQVID 190

[Close]

BLAST of CsaV3_3G021700 vs. ExPASy Swiss-Prot
Match: O34125 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.5e-56
Identity = 105/172 (61.05%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 96  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIY 155
           D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L+INSPGGSVTAGM IY
Sbjct: 53  DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 156 DAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSI 215
           D M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ R+MIHQPLG A G+A ++ I
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEI 172

Query: 216 RIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVI 268
           + RE+ YHK  LN + ++ TG+P+E+IE+DT+RD FM+P EAK YGLID+V+
Sbjct: 173 QAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 224

[Close]

BLAST of CsaV3_3G021700 vs. ExPASy Swiss-Prot
Match: Q5N1P6 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=clpP3 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.5e-56
Identity = 105/172 (61.05%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 96  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIY 155
           D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L+INSPGGSVTAGM IY
Sbjct: 53  DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 156 DAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSI 215
           D M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ R+MIHQPLG A G+A ++ I
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEI 172

Query: 216 RIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVI 268
           + RE+ YHK  LN + ++ TG+P+E+IE+DT+RD FM+P EAK YGLID+V+
Sbjct: 173 QAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 224

[Close]

BLAST of CsaV3_3G021700 vs. ExPASy TrEMBL
Match: A0A0A0LA84 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_3G363170 PE=3 SV=1)

HSP 1 Score: 677.6 bits (1747), Expect = 2.8e-191
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0


Query: 1   MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP 60
           MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP
Sbjct: 1   MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP 60

Query: 61  SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF 120
           SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF
Sbjct: 61  SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF 120

Query: 121 IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL 180
           IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL
Sbjct: 121 IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL 180

Query: 181 LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE 240
           LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE
Sbjct: 181 LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE 240

Query: 241 QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK 300
           QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK
Sbjct: 241 QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK 300

Query: 301 AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
           AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV
Sbjct: 301 AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 339

[Close]

BLAST of CsaV3_3G021700 vs. ExPASy TrEMBL
Match: A0A1S3C615 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103496858 PE=3 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 2.5e-176
Identity = 317/340 (93.24%), Postives = 326/340 (95.88%), Query Frame = 0


Query: 1   MELSFTHAPSPSPYGLKRSDHGF-QSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNH 60
           MELSFTHAPSPSPYGLKR DHG   SSH PISTPS HSHG NFTSN FRIRNCSVPV+NH
Sbjct: 1   MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNH 60

Query: 61  PSHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120
           PS SSSSLRRTLSSNWDV SNYS SSA SLPRFEELDTTNMLLRQRIIFLGSQVDD+TAD
Sbjct: 61  PSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQVDDVTAD 120

Query: 121 FIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAF 180
           FIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAF
Sbjct: 121 FIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAF 180

Query: 181 LLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPI 240
           LLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP+
Sbjct: 181 LLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL 240

Query: 241 EQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSR 300
           EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTR+WDLWKVEGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR 300

Query: 301 KAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
           KAKKNLPSESKILKNGY +GG+GSD+ERG QQETEEPSPV
Sbjct: 301 KAKKNLPSESKILKNGY-QGGEGSDEERGSQQETEEPSPV 339

[Close]

BLAST of CsaV3_3G021700 vs. ExPASy TrEMBL
Match: A0A5A7UZN2 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00040 PE=3 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 7.1e-171
Identity = 317/376 (84.31%), Postives = 326/376 (86.70%), Query Frame = 0


Query: 1   MELSFTHAPSPSPYGLKRSDHGF-QSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNH 60
           MELSFTHAPSPSPYGLKR DHG   SSH PISTPS HSHG NFTSN FRIRNCSVPV+NH
Sbjct: 1   MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNH 60

Query: 61  PSHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGS-------- 120
           PS SSSSLRRTLSSNWDV SNYS SSA SLPRFEELDTTNMLLRQRIIFLGS        
Sbjct: 61  PSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQAMSPTIS 120

Query: 121 ----------------------------QVDDMTADFIISQLLFLDAEDPTKDIKLFINS 180
                                       QVDD+TADFIISQLLFLDAEDPTKDIKLFINS
Sbjct: 121 SYFLITCCLSWKKKRGFLLGLEYCIGYWQVDDVTADFIISQLLFLDAEDPTKDIKLFINS 180

Query: 181 PGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPL 240
           PGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPL
Sbjct: 181 PGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPL 240

Query: 241 GTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLI 300
           GTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP+EQIELDT+RDNFMNPWEAKEYGLI
Sbjct: 241 GTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI 300

Query: 301 DEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEGGQGS 340
           DEVIDDGKPGLIAPIAEATPPPKTR+WDLWKVEGSRKAKKNLPSESKILKNGY +GG+GS
Sbjct: 301 DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGY-QGGEGS 360

[Close]

BLAST of CsaV3_3G021700 vs. ExPASy TrEMBL
Match: A0A6J1CQN6 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111013299 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 8.5e-156
Identity = 288/339 (84.96%), Postives = 305/339 (89.97%), Query Frame = 0


Query: 1   MELSFTHAPSPSPYGLKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVNHP 60
           ME+SFT+ PSPSP  L R DHG  SS FP+ TP KHSHGGN + N  R    S P+V   
Sbjct: 1   MEMSFTYTPSPSPQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPK-SAPLVK-A 60

Query: 61  SHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTADF 120
           S SSSS+RRTLSSNWDV  N+S +SA SL RFEELDTTNMLLRQRIIFLGSQVDDMTADF
Sbjct: 61  SLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNMLLRQRIIFLGSQVDDMTADF 120

Query: 121 IISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL 180
           IISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL
Sbjct: 121 IISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFL 180

Query: 181 LASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPIE 240
           LA+GSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP+E
Sbjct: 181 LAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLE 240

Query: 241 QIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGSRK 300
           QIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTR+WDLWKVEGSRK
Sbjct: 241 QIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSRK 300

Query: 301 AKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSPV 340
           AKKNLPSE KIL+NGY +GGQG+D+ERG QQETEEPSPV
Sbjct: 301 AKKNLPSEDKILQNGY-QGGQGNDEERGTQQETEEPSPV 336

[Close]

BLAST of CsaV3_3G021700 vs. ExPASy TrEMBL
Match: A0A6J1G9P1 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111452225 PE=3 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.5e-152
Identity = 285/340 (83.82%), Postives = 305/340 (89.71%), Query Frame = 0


Query: 1   MELSFTHAPSPSPYG-LKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVN- 60
           MELSFT+APSPS +  L   +HG  +S FP+STP KHSHG N +SNAFRIR  SVPV   
Sbjct: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRK-SVPVAAV 60

Query: 61  HPSHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTA 120
             S SSS LRRTLSSNWDV  NYS +SA +LPRFEELDTTNMLLRQRIIFLGSQVDDMTA
Sbjct: 61  KASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTA 120

Query: 121 DFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGA 180
           DFIISQLLFLDAEDPTKDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAASMGA
Sbjct: 121 DFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGA 180

Query: 181 FLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP 240
           FLLA+GSKGKRFCMPNGRVMIHQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKP
Sbjct: 181 FLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKP 240

Query: 241 IEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGS 300
           +EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEA PPPKTR+WDLWK+EGS
Sbjct: 241 LEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGS 300

Query: 301 RKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSP 339
           RKAKKNLPSE+KIL+NGY    QGSD+ER  Q ETEEPSP
Sbjct: 301 RKAKKNLPSETKILQNGY----QGSDEERSPQPETEEPSP 335

[Close]

BLAST of CsaV3_3G021700 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 416.8 bits (1070), Expect = 1.7e-116
Identity = 215/279 (77.06%), Postives = 236/279 (84.59%), Query Frame = 0


Query: 47  FRIRNCSVPVVNHP--SHSSSSL----RRTLSSNWDV--FSNYSVSSARS-LPRFEELDT 106
           F IRN  +P  + P    SS SL    R+TLSSNWDV  FS  SV+ + S LP FEELDT
Sbjct: 27  FPIRNHRIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDT 86

Query: 107 TNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDA 166
           TNMLLRQRI+FLGSQVDDMTAD +ISQLL LDAED  +DI LFINSPGGS+TAGMGIYDA
Sbjct: 87  TNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDA 146

Query: 167 MKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRI 226
           MK CKADVSTVCLGLAASMGAFLLASGSKGKR+CMPN +VMIHQPLGTAGGKATEMSIRI
Sbjct: 147 MKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRI 206

Query: 227 REMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAP 286
           REM YHKIKLNKIFSRITGKP  +IE DT+RDNF+NPWEAKEYGLID VIDDGKPGLIAP
Sbjct: 207 REMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAP 266

Query: 287 IAEATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGY 317
           I + TPPPKT++WDLWKVEG++K   NLPSE  + +NGY
Sbjct: 267 IGDGTPPPKTKVWDLWKVEGTKKDNTNLPSERSMTQNGY 305

[Close]

BLAST of CsaV3_3G021700 vs. TAIR 10
Match: AT5G45390.1 (CLP protease P4 )

HSP 1 Score: 204.9 bits (520), Expect = 1.0e-52
Identity = 110/228 (48.25%), Postives = 152/228 (66.67%), Query Frame = 0


Query: 60  PSHSSSSLRRTLSSNWDVFSNYSVSSAR---SLPRFEELDTTNMLLRQRIIFLGSQVDDM 119
           P+   S   RT S +   F+N S+  ++   S  R  E D   +LLR+RI+FLGS +DD 
Sbjct: 40  PTKLISPPLRTTSPSPLRFANASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDF 99

Query: 120 TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASM 179
            AD I+SQLL LDA+DP KDIKLFINSPGGS++A M IYD ++L +ADVST+ LG+AAS 
Sbjct: 100 VADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAAST 159

Query: 180 GAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITG 239
            + +L +G+KGKRF MPN R+MIHQPLG A G+A ++ I+ +E+ ++K  +  I +  T 
Sbjct: 160 ASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTS 219

Query: 240 KPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPP 285
           +  EQ+  D +RD +M+P EA EYGLID VID      + P+ +   P
Sbjct: 220 RSFEQVLKDIDRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKP 267

[Close]

BLAST of CsaV3_3G021700 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 199.9 bits (507), Expect = 3.3e-51
Identity = 101/177 (57.06%), Postives = 132/177 (74.58%), Query Frame = 0


Query: 91  RFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTA 150
           RF+ +   + L + RII  G  VDD  A+ I++QLL+LDA DPTKDI +++NSPGGSVTA
Sbjct: 111 RFQSI--ISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTA 170

Query: 151 GMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKA 210
           GM I+D M+  + DVSTVC+GLAASMGAFLL++G+KGKR+ +PN R+MIHQPLG A G  
Sbjct: 171 GMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQ 230

Query: 211 TEMSIRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVI 268
           T++ I+  EM +HK  LN   +  TG+ +E+I  DT+RD FM+  EAKEYGLID VI
Sbjct: 231 TDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of CsaV3_3G021700 vs. TAIR 10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7 )

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-41
Identity = 77/174 (44.25%), Postives = 127/174 (72.99%), Query Frame = 0


Query: 96  DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIY 155
           D  + LL++RII +   ++D T+  +++QLL+L++E+P+K I +++NSPGG VTAG+ IY
Sbjct: 48  DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIY 107

Query: 156 DAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSI 215
           D M+  ++ +ST+CLG AASM + LLA+G+KG+R  +PN  VMIHQP G   G+A +++I
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITI 167

Query: 216 RIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDD 270
             +++      LN+++ + TG+P++ +  + +RD+FM P EAK +G+IDEVID+
Sbjct: 168 HTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDE 221

[Close]

BLAST of CsaV3_3G021700 vs. TAIR 10
Match: AT1G11750.1 (CLP protease proteolytic subunit 6 )

HSP 1 Score: 149.8 bits (377), Expect = 3.9e-36
Identity = 74/174 (42.53%), Postives = 112/174 (64.37%), Query Frame = 0


Query: 95  LDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGI 154
           LD +++L R RIIF+G  ++   A  +ISQL+ L + D   DI +++N PGGS  + + I
Sbjct: 95  LDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAI 154

Query: 155 YDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMS 214
           YD M   K  V TV  G+AAS GA LLA G KG R+ MPN RVMIHQP    GG   ++ 
Sbjct: 155 YDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVR 214

Query: 215 IRIREMAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVID 269
            ++ E    + K++++++  TG+P+E+++  TERD F++  EA E+GLID +++
Sbjct: 215 RQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLE 268

The following BLAST results are available for this feature:

BLAST of CsaV3_3G021700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651427.1	5.8e-191	100.00	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis sativus...	[more]
XP_008457103.1	5.2e-176	93.24	PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucu...	[more]
KAA0060718.1	1.5e-170	84.31	ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa] >TYK...	[more]
XP_038902354.1	1.1e-165	89.68	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Benincasa hispi...	[more]
XP_022143418.1	1.7e-155	84.96	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica chara...	[more]

BLAST of CsaV3_3G021700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SXJ6	2.4e-115	77.06	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis t...	[more]
Q8YXH5	7.8e-58	64.16	ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp. (strain PCC 7120 ...	[more]
Q3MFR5	1.3e-57	64.16	ATP-dependent Clp protease proteolytic subunit 1 OS=Trichormus variabilis (strai...	[more]
O34125	2.5e-56	61.05	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (str...	[more]
Q5N1P6	2.5e-56	61.05	ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain AT...	[more]

BLAST of CsaV3_3G021700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA84	2.8e-191	100.00	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A1S3C615	2.5e-176	93.24	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7UZN2	7.1e-171	84.31	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1CQN6	8.5e-156	84.96	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1G9P1	1.5e-152	83.82	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of CsaV3_3G021700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66670.1	1.7e-116	77.06	CLP protease proteolytic subunit 3	[more]
AT5G45390.1	1.0e-52	48.25	CLP protease P4	[more]
AT1G02560.1	3.3e-51	57.06	nuclear encoded CLP protease 5	[more]
AT5G23140.1	1.4e-41	44.25	nuclear-encoded CLP protease P7	[more]
AT1G11750.1	3.9e-36	42.53	CLP protease proteolytic subunit 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 96..111 score: 46.25 coord: 167..184 score: 66.67 coord: 245..264 score: 58.88 coord: 188..207 score: 52.0 coord: 136..156 score: 64.64
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 53..270 score: 37.222645
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 96..266 e-value: 8.75242E-103 score: 297.431
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 95..268 e-value: 2.3E-73 score: 246.0
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 68..314
None	No IPR available	GENE3D	3.90.226.10		coord: 80..271 e-value: 3.5E-71 score: 241.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..339
None	No IPR available	PANTHER	PTHR10381:SF50	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 3, CHLOROPLASTIC	coord: 68..314
IPR018215	ClpP, Ser active site	PROSITE	PS00381	CLP_PROTEASE_SER	coord: 167..178
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 189..202
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 94..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G021700.1	CsaV3_3G021700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity