CsaV3_3G020230 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCTTCAAGTTCATGTCTTCAAAAGAACAACAAAGATAATGCCAAAGCTCCTCGCCTACGACGACTGACTGTGAATGCCCGTCGTCATTCACGACCACCTCGAAGAGCCCGCAACAGTAAAATCAACCCTGCTCCTCCGCCTAAGAAGAGCACCGGCGGCGGTG ATGGAGTCTTCAAGTTCATGTCTTCAAAAGAACAACAAAGATAATGCCAAAGCTCCTCGCCTACGACGACTGACTGTGAATGCCCGTCGTCATTCACGACCACCTCGAAGAGCCCGCAACAGTAAAATCAACCCTGCTCCTCCGCCTAAGAAGAGCACCGGCGGCGGTG ATGGAGTCTTCAAGTTCATGTCTTCAAAAGAACAACAAAGATAATGCCAAAGCTCCTCGCCTACGACGACTGACTGTGAATGCCCGTCGTCATTCACGACCACCTCGAAGAGCCCGCAACAGTAAAATCAACCCTGCTCCTCCGCCTAAGAAGAGCACCGGCGGCGGTG MESSSSCLQKNNKDNAKAPRLRRLTVNARRHSRPPRRARNSKINPAPPPKKSTGGGX Homology
BLAST of CsaV3_3G020230 vs. NCBI nr
Match: KAE8650564.1 (hypothetical protein Csa_011065, partial [Cucumis sativus]) HSP 1 Score: 107.1 bits (266), Expect = 5.2e-20 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CsaV3_3G020230 vs. NCBI nr
Match: KAE8646590.1 (hypothetical protein Csa_005634, partial [Cucumis sativus]) HSP 1 Score: 71.2 bits (173), Expect = 3.2e-09 Identity = 45/63 (71.43%), Postives = 49/63 (77.78%), Query Frame = 0
BLAST of CsaV3_3G020230 vs. NCBI nr
Match: KAA0048493.1 (hypothetical protein E6C27_scaffold61G001060 [Cucumis melo var. makuwa] >TYK28285.1 hypothetical protein E5676_scaffold600G001020 [Cucumis melo var. makuwa]) HSP 1 Score: 69.7 bits (169), Expect = 9.2e-09 Identity = 47/65 (72.31%), Postives = 48/65 (73.85%), Query Frame = 0
BLAST of CsaV3_3G020230 vs. ExPASy TrEMBL
Match: A0A0A0L7D2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258100 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.5e-20 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CsaV3_3G020230 vs. ExPASy TrEMBL
Match: A0A0A0KAN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020130 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.5e-09 Identity = 45/63 (71.43%), Postives = 49/63 (77.78%), Query Frame = 0
BLAST of CsaV3_3G020230 vs. ExPASy TrEMBL
Match: A0A5D3DY74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001020 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.5e-09 Identity = 47/65 (72.31%), Postives = 48/65 (73.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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