CsaV3_3G016880 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGCATCAAGTCTCTTGGGCAGCAGCAAGTTGTGATTCTGTCGTTGCTGGCTTTGATACTGGCTCAAGCACAGGCACAGCCTCAAGGCTGCTCAACTCAGCTCAGCAACTTAAATAGTTGTGCACCATTTGTGCTTCCTGGTGCTACTAACCCAAGCCCAGAGTGCTGTGGTGCACTTGGAGCTGTGCAACAAGATTGCCTTTGCAGCACCCTTAGAATTGCCTCCACTCTCCCTTCTCTTTGCCAACTTCCAACTCTCTCTTGTGGTCAGTCTTTTCTTTCTTTTTCTAACCATTTTTCTTAAGAATTGGCTGTTTCTGTTGAACGAAAGGTTTCTTTTTTCTTTTTGCTTCATTTCAGGTTCAAACTAG ATGGCAGGCATCAAGTCTCTTGGGCAGCAGCAAGTTGTGATTCTGTCGTTGCTGGCTTTGATACTGGCTCAAGCACAGGCACAGCCTCAAGGCTGCTCAACTCAGCTCAGCAACTTAAATAGTTGTGCACCATTTGTGCTTCCTGGTGCTACTAACCCAAGCCCAGAGTGCTGTGGTGCACTTGGAGCTGTGCAACAAGATTGCCTTTGCAGCACCCTTAGAATTGCCTCCACTCTCCCTTCTCTTTGCCAACTTCCAACTCTCTCTTGTGGTTCAAACTAG ATGGCAGGCATCAAGTCTCTTGGGCAGCAGCAAGTTGTGATTCTGTCGTTGCTGGCTTTGATACTGGCTCAAGCACAGGCACAGCCTCAAGGCTGCTCAACTCAGCTCAGCAACTTAAATAGTTGTGCACCATTTGTGCTTCCTGGTGCTACTAACCCAAGCCCAGAGTGCTGTGGTGCACTTGGAGCTGTGCAACAAGATTGCCTTTGCAGCACCCTTAGAATTGCCTCCACTCTCCCTTCTCTTTGCCAACTTCCAACTCTCTCTTGTGGTTCAAACTAG MAGIKSLGQQQVVILSLLALILAQAQAQPQGCSTQLSNLNSCAPFVLPGATNPSPECCGALGAVQQDCLCSTLRIASTLPSLCQLPTLSCGSN* Homology
BLAST of CsaV3_3G016880 vs. NCBI nr
Match: XP_004140787.1 (protein MEN-8 [Cucumis sativus] >KGN57351.1 hypothetical protein Csa_010992 [Cucumis sativus]) HSP 1 Score: 183.7 bits (465), Expect = 7.2e-43 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. NCBI nr
Match: XP_008439180.1 (PREDICTED: protein MEN-8 [Cucumis melo] >KAA0033620.1 protein MEN-8 [Cucumis melo var. makuwa] >TYK22288.1 protein MEN-8 [Cucumis melo var. makuwa]) HSP 1 Score: 174.9 bits (442), Expect = 3.3e-40 Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. NCBI nr
Match: XP_038892584.1 (protein MEN-8-like [Benincasa hispida]) HSP 1 Score: 164.9 bits (416), Expect = 3.5e-37 Identity = 81/93 (87.10%), Postives = 87/93 (93.55%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. NCBI nr
Match: XP_022945428.1 (stamen-specific protein FIL1 [Cucurbita moschata]) HSP 1 Score: 149.4 bits (376), Expect = 1.5e-32 Identity = 73/93 (78.49%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. NCBI nr
Match: XP_022968421.1 (stamen-specific protein FIL1 [Cucurbita maxima] >XP_023542033.1 stamen-specific protein FIL1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 147.9 bits (372), Expect = 4.4e-32 Identity = 72/93 (77.42%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. ExPASy Swiss-Prot
Match: O24356 (Protein MEN-8 OS=Silene latifolia OX=37657 GN=MEN-8 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 6.4e-18 Identity = 45/84 (53.57%), Postives = 61/84 (72.62%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. ExPASy Swiss-Prot
Match: Q38737 (Stamen-specific protein FIL1 OS=Antirrhinum majus OX=4151 GN=FIL1 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 9.2e-17 Identity = 49/96 (51.04%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. ExPASy Swiss-Prot
Match: Q43495 (Protein 108 OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 8.6e-15 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. ExPASy Swiss-Prot
Match: Q00762 (Tapetum-specific protein A9 OS=Arabidopsis thaliana OX=3702 GN=A9 PE=2 SV=2) HSP 1 Score: 74.3 bits (181), Expect = 8.1e-13 Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. ExPASy Swiss-Prot
Match: Q05772 (Tapetum-specific protein A9 OS=Brassica napus OX=3708 GN=A9 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 6.8e-12 Identity = 38/93 (40.86%), Postives = 52/93 (55.91%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. ExPASy TrEMBL
Match: A0A0A0LBB5 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180390 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 3.5e-43 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. ExPASy TrEMBL
Match: A0A5D3DFQ3 (Protein MEN-8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00440 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40 Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. ExPASy TrEMBL
Match: A0A1S3AY46 (protein MEN-8 OS=Cucumis melo OX=3656 GN=LOC103484052 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.6e-40 Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. ExPASy TrEMBL
Match: A0A6J1G0V2 (stamen-specific protein FIL1 OS=Cucurbita moschata OX=3662 GN=LOC111449664 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 7.3e-33 Identity = 73/93 (78.49%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. ExPASy TrEMBL
Match: A0A6J1HUT5 (stamen-specific protein FIL1 OS=Cucurbita maxima OX=3661 GN=LOC111467668 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.1e-32 Identity = 72/93 (77.42%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. TAIR 10
Match: AT5G52160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 89.0 bits (219), Expect = 2.3e-18 Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. TAIR 10
Match: AT5G62080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.0e-15 Identity = 41/93 (44.09%), Postives = 55/93 (59.14%), Query Frame = 0
BLAST of CsaV3_3G016880 vs. TAIR 10
Match: AT5G07230.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 74.3 bits (181), Expect = 5.7e-14 Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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