CsaV3_3G015240 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G015240
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	calmodulin
Location	chr3: 11318050 .. 11319024 (+)
RNA-Seq Expression	CsaV3_3G015240
Synteny	CsaV3_3G015240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTCAGTTCCAAACAACATGGGCCCAACAGACCGGGTAACCCCGAAATTCCCCTCTCCCTATAAAACCCCTTCCCCCTCTCTTCATGTGTCCACAACTTTTCTCCCAAATTTCCTCTTTCATTTCATATCGTCTCTATTTTTCAGCCATGTGCCCTTCCGGTACCGCCTCCGACGATCGTTCTGACGTTGCGTCCGTCGGTTTCCGTCAGGCATTCGAGGTACTCGACGCCGACCACGACGGAAAGATTAGCCGCGACGATCTTCGTAAATTCTACAGCGGCGGCGGCGATGCCGACGAAGATGCAATTGGGTCAATGATAGCCGCTGCGGACTTGAATCGGAACGGAGTTGTAGAGTATGAGGAGTTCGAGCGCGTATTGTCCGGGGGACGGAGGAGATCGACGGGGATTATGGAGGAGGTGTTTAAGACGATGGATAAAGATGGAGATGGACGGTTGAGCCATGGCGACTTGAAGAGCTATATGCATTTGGCTGGATTTTCGATATCTGATGAAGAGGTAACGGCGATGATTAGGTTTGGCGGTGGAGATGAATCGGACGGCGTTTGTTATGAAGGATTGCTCAAGATTTTGGCCGTTGATAATATGTATTAATTAGTTCATATATTGATATGTATATTTTTTTGGGTGTGGTTGAGATCTGAGGTTTCCAAGAAATGCATTTCTGGAAAATGTTTGTCTTCTTATTGTAAAAAGTCCTTCTCTGGGAGGGGAAAAACGTTTTTAATAAAAAGCGTTTATTTCTTGAGCCGTTCTTGTTGTGCTTTAGGTGTTACTAATCCTAAAGCTCTTGTATGTAAATTTGAAGTTTACTCAATAAATTTTAGTGTTTTGAGAGTAGAAAAATGAAAGAGTGACAAAGAAATAGGAAATGCTTAAATTTCCTATCATTCATTCGATTTAAAAGGTGAATGAAAACATATTTGAATATTTAAAAATAAGCAAACTATTTT

mRNA sequence

ATGTGTCCACAACTTTTCTCCCAAATTTCCTCTTTCATTTCATATCGTCTCTATTTTTCAGCCATGTGCCCTTCCGGTACCGCCTCCGACGATCGTTCTGACGTTGCGTCCGTCGGTTTCCGTCAGGCATTCGAGGTACTCGACGCCGACCACGACGGAAAGATTAGCCGCGACGATCTTCGTAAATTCTACAGCGGCGGCGGCGATGCCGACGAAGATGCAATTGGGTCAATGATAGCCGCTGCGGACTTGAATCGGAACGGAGTTGTAGAGTATGAGGAGTTCGAGCGCGTATTGTCCGGGGGACGGAGGAGATCGACGGGGATTATGGAGGAGGTGTTTAAGACGATGGATAAAGATGGAGATGGACGGTTGAGCCATGGCGACTTGAAGAGCTATATGCATTTGGCTGGATTTTCGATATCTGATGAAGAGGTAACGGCGATGATTAGGTTTGGCGGTGGAGATGAATCGGACGGCGTTTGTTATGAAGGATTGCTCAAGATTTTGGCCGTTGATAATATGTATTAA

Coding sequence (CDS)

ATGTGTCCACAACTTTTCTCCCAAATTTCCTCTTTCATTTCATATCGTCTCTATTTTTCAGCCATGTGCCCTTCCGGTACCGCCTCCGACGATCGTTCTGACGTTGCGTCCGTCGGTTTCCGTCAGGCATTCGAGGTACTCGACGCCGACCACGACGGAAAGATTAGCCGCGACGATCTTCGTAAATTCTACAGCGGCGGCGGCGATGCCGACGAAGATGCAATTGGGTCAATGATAGCCGCTGCGGACTTGAATCGGAACGGAGTTGTAGAGTATGAGGAGTTCGAGCGCGTATTGTCCGGGGGACGGAGGAGATCGACGGGGATTATGGAGGAGGTGTTTAAGACGATGGATAAAGATGGAGATGGACGGTTGAGCCATGGCGACTTGAAGAGCTATATGCATTTGGCTGGATTTTCGATATCTGATGAAGAGGTAACGGCGATGATTAGGTTTGGCGGTGGAGATGAATCGGACGGCGTTTGTTATGAAGGATTGCTCAAGATTTTGGCCGTTGATAATATGTATTAA

Protein sequence

MCPQLFSQISSFISYRLYFSAMCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAAADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSISDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY*

Homology

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BLAST of CsaV3_3G015240 vs. NCBI nr
Match: XP_004134248.2 (calcium-binding protein CP1 [Cucumis sativus] >KGN57174.1 hypothetical protein Csa_009868 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 5.8e-94
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MCPQLFSQISSFISYRLYFSAMCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDL 60
           MCPQLFSQISSFISYRLYFSAMCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDL
Sbjct: 1   MCPQLFSQISSFISYRLYFSAMCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDL 60

Query: 61  RKFYSGGGDADEDAIGSMIAAADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKD 120
           RKFYSGGGDADEDAIGSMIAAADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKD
Sbjct: 61  RKFYSGGGDADEDAIGSMIAAADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKD 120

Query: 121 GDGRLSHGDLKSYMHLAGFSISDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY 177
           GDGRLSHGDLKSYMHLAGFSISDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY
Sbjct: 121 GDGRLSHGDLKSYMHLAGFSISDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY 176

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BLAST of CsaV3_3G015240 vs. NCBI nr
Match: XP_008438964.1 (PREDICTED: calmodulin [Cucumis melo] >KAA0049553.1 calmodulin [Cucumis melo var. makuwa] >TYK16230.1 calmodulin [Cucumis melo var. makuwa])

HSP 1 Score: 303.5 bits (776), Expect = 1.2e-78
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 22  MCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA 81
           MCPSGTAS DRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA
Sbjct: 1   MCPSGTAS-DRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA 60

Query: 82  ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSI 141
           ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSH DLKSYMHLAGFSI
Sbjct: 61  ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHADLKSYMHLAGFSI 120

Query: 142 SDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY 177
           SDEEVTAMIRFGGGDESDGVCYEGLLKILA+DNMY
Sbjct: 121 SDEEVTAMIRFGGGDESDGVCYEGLLKILAIDNMY 154

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BLAST of CsaV3_3G015240 vs. NCBI nr
Match: XP_038891278.1 (calcium-binding protein CP1 [Benincasa hispida])

HSP 1 Score: 273.5 bits (698), Expect = 1.3e-69
Identity = 139/155 (89.68%), Postives = 143/155 (92.26%), Query Frame = 0


Query: 22  MCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA 81
           MCPSGT+S  RSDVA+  FRQAFE LDADHDGKIS DDLRKFYSG GDADED IGSMIA 
Sbjct: 1   MCPSGTSS-GRSDVAA-DFRQAFEALDADHDGKISPDDLRKFYSGAGDADEDTIGSMIAV 60

Query: 82  ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSI 141
           ADLNRNG VEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSH DLKSYMHLAGFSI
Sbjct: 61  ADLNRNGFVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHADLKSYMHLAGFSI 120

Query: 142 SDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY 177
           SDEEV AMIRFGGGDESDGVCYEGLLKILAVDN++
Sbjct: 121 SDEEVAAMIRFGGGDESDGVCYEGLLKILAVDNIF 153

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BLAST of CsaV3_3G015240 vs. NCBI nr
Match: XP_022955465.1 (calmodulin-beta-like [Cucurbita moschata])

HSP 1 Score: 252.3 bits (643), Expect = 3.1e-63
Identity = 133/155 (85.81%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 22  MCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA 81
           MCPSGTA+   SD A   FRQAFE LDADHDGKISRDDLRKFYS   DADEDAI SMIA 
Sbjct: 1   MCPSGTAA-SYSDTAP-AFRQAFEALDADHDGKISRDDLRKFYS--KDADEDAIRSMIAV 60

Query: 82  ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSI 141
           ADLNRNG VEYEEFERVLS GRRRSTGIMEEVFKTMDKDGDGRLSH DLKSYMH AGFSI
Sbjct: 61  ADLNRNGFVEYEEFERVLSSGRRRSTGIMEEVFKTMDKDGDGRLSHADLKSYMHFAGFSI 120

Query: 142 SDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY 177
           SDEEV AMIRFGGGDESDGV YEGLLKIL+VDN+Y
Sbjct: 121 SDEEVEAMIRFGGGDESDGVSYEGLLKILSVDNVY 151

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BLAST of CsaV3_3G015240 vs. NCBI nr
Match: XP_022979972.1 (calmodulin-A-like [Cucurbita maxima])

HSP 1 Score: 252.3 bits (643), Expect = 3.1e-63
Identity = 133/155 (85.81%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 22  MCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA 81
           MCPSGTA+   SD A   FRQAFE LDADHDGKISRDDLRKFYS   DADEDAI SMIA 
Sbjct: 1   MCPSGTAA-SYSDTAP-AFRQAFEALDADHDGKISRDDLRKFYS--KDADEDAIRSMIAV 60

Query: 82  ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSI 141
           ADLNRNG VEYEEFERVLS GRRRSTGIMEEVFKTMDKDGDGRLSH DLKSYMH AGFSI
Sbjct: 61  ADLNRNGFVEYEEFERVLSSGRRRSTGIMEEVFKTMDKDGDGRLSHADLKSYMHFAGFSI 120

Query: 142 SDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY 177
           SDEEV AMI+FGGGDESDGV YEGLLKILAVDN+Y
Sbjct: 121 SDEEVEAMIKFGGGDESDGVSYEGLLKILAVDNVY 151

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BLAST of CsaV3_3G015240 vs. ExPASy Swiss-Prot
Match: Q9FDX6 (Calcium-binding protein CP1 OS=Arabidopsis thaliana OX=3702 GN=CP1 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.5e-41
Identity = 85/157 (54.14%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 22  MCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSG---GGDADEDAIGSM 81
           MCPSG  +   +  A+  FR AFE++D DHDGKIS DDLR FY+G   G + DE  IG+M
Sbjct: 1   MCPSGRIAIPITTTANPNFRPAFEIIDTDHDGKISSDDLRAFYAGIPSGENNDETMIGTM 60

Query: 82  IAAADLNRNGVVEYEEFERVLS------GGRRRSTGIMEEVFKTMDKDGDGRLSHGDLKS 141
           I+ AD N++G VE++EFE+VL        G     G+M++VFK MDKDGDGRLS+GDLKS
Sbjct: 61  ISVADANKDGFVEFDEFEKVLETTPFSRSGNGGDDGLMKDVFKVMDKDGDGRLSYGDLKS 120

Query: 142 YMHLAGFSISDEEVTAMIRFGGGDESDGVCYEGLLKI 170
           YM  AG +++D+E+ +MIR  GGD +DGV ++GLLKI
Sbjct: 121 YMDSAGLAVTDDEIKSMIRLAGGDLNDGVSFDGLLKI 157

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BLAST of CsaV3_3G015240 vs. ExPASy Swiss-Prot
Match: A8CEP3 (Calmodulin OS=Saccharina japonica OX=88149 GN=cam PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-10
Identity = 45/146 (30.82%), Postives = 75/146 (51.37%), Query Frame = 0


Query: 29  SDDRSDVASVGFRQAFEVLDADHDGKISRDDL-RKFYSGGGDADEDAIGSMIAAADLNRN 88
           +D  ++     F++AF + D D DG I+  +L     S G +  E  +  MI   D + N
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGN 61

Query: 89  GVVEYEEFERVLSGGRRRSTGIMEEV---FKTMDKDGDGRLSHGDLKSYMHLAGFSISDE 148
           G +++ EF  +++  + + T   EE+   FK  DKDG+G +S  +L+  M   G  ++DE
Sbjct: 62  GTIDFPEFLTMMA-RKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDE 121

Query: 149 EVTAMIRFGGGDESDGVCYEGLLKIL 171
           EV  MIR    D    + YE  +K++
Sbjct: 122 EVDEMIREADIDGDGQINYEEFVKMM 146

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BLAST of CsaV3_3G015240 vs. ExPASy Swiss-Prot
Match: O94739 (Calmodulin OS=Pleurotus ostreatus OX=5322 GN=CMD1 PE=2 SV=3)

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10
Identity = 46/146 (31.51%), Postives = 74/146 (50.68%), Query Frame = 0


Query: 29  SDDRSDVASVGFRQAFEVLDADHDGKISRDDL-RKFYSGGGDADEDAIGSMIAAADLNRN 88
           +D  S+     F++AF + D D DG I+  +L     S G +  E  +  MI   D + N
Sbjct: 2   ADQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61

Query: 89  GVVEYEEFERVLSGGRRRSTGIMEEV---FKTMDKDGDGRLSHGDLKSYMHLAGFSISDE 148
           G +++ EF  +++  + R T   EE+   FK  DKDG+G +S  +L+  M   G  ++D 
Sbjct: 62  GTIDFPEFLTMMA-RKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDN 121

Query: 149 EVTAMIRFGGGDESDGVCYEGLLKIL 171
           EV  MIR    D    + YE  +K++
Sbjct: 122 EVDEMIREADVDGDGQINYEEFVKMM 146

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BLAST of CsaV3_3G015240 vs. ExPASy Swiss-Prot
Match: P02599 (Calmodulin OS=Dictyostelium discoideum OX=44689 GN=calA PE=1 SV=3)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10
Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = 0


Query: 40  FRQAFEVLDADHDGKISRDDL-RKFYSGGGDADEDAIGSMIAAADLNRNGVVEYEEFERV 99
           F++AF + D D DG I+  +L     S G +  E  +  MI   D + NG +++ EF  +
Sbjct: 15  FKEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGNIDFPEFLTM 74

Query: 100 LSGGRRRSTGIMEEV---FKTMDKDGDGRLSHGDLKSYMHLAGFSISDEEVTAMIRFGGG 159
           ++  + + T   EE+   FK  DKDG+G +S  +L+  M   G  +++EEV  MIR    
Sbjct: 75  MA-RKMQDTDTEEEIREAFKVFDKDGNGYISAAELRHVMTSLGEKLTNEEVDEMIREADL 134

Query: 160 DESDGVCYEGLLKILAVDN 175
           D    V Y+  +K++ V N
Sbjct: 135 DGDGQVNYDEFVKMMIVRN 152

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BLAST of CsaV3_3G015240 vs. ExPASy Swiss-Prot
Match: Q71UH5 (Calmodulin OS=Globisporangium splendens OX=82926 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10
Identity = 45/146 (30.82%), Postives = 75/146 (51.37%), Query Frame = 0


Query: 29  SDDRSDVASVGFRQAFEVLDADHDGKISRDDL-RKFYSGGGDADEDAIGSMIAAADLNRN 88
           +D  ++     F++AF + D D DG I+  +L     S G +  E  +  MI   D + N
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61

Query: 89  GVVEYEEFERVLSGGRRRSTGIMEEV---FKTMDKDGDGRLSHGDLKSYMHLAGFSISDE 148
           G +++ EF  +++  + + T   EE+   FK  DKDG+G +S  +L+  M   G  ++DE
Sbjct: 62  GTIDFPEFLTMMA-RKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDE 121

Query: 149 EVTAMIRFGGGDESDGVCYEGLLKIL 171
           EV  MIR    D    + YE  +K++
Sbjct: 122 EVDEMIREADIDGDGQINYEEFVKMM 146

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BLAST of CsaV3_3G015240 vs. ExPASy TrEMBL
Match: A0A0A0L828 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G167380 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.8e-94
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MCPQLFSQISSFISYRLYFSAMCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDL 60
           MCPQLFSQISSFISYRLYFSAMCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDL
Sbjct: 1   MCPQLFSQISSFISYRLYFSAMCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDL 60

Query: 61  RKFYSGGGDADEDAIGSMIAAADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKD 120
           RKFYSGGGDADEDAIGSMIAAADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKD
Sbjct: 61  RKFYSGGGDADEDAIGSMIAAADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKD 120

Query: 121 GDGRLSHGDLKSYMHLAGFSISDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY 177
           GDGRLSHGDLKSYMHLAGFSISDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY
Sbjct: 121 GDGRLSHGDLKSYMHLAGFSISDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY 176

[Close]

BLAST of CsaV3_3G015240 vs. ExPASy TrEMBL
Match: A0A5D3CXZ4 (Calmodulin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001590 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.7e-79
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 22  MCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA 81
           MCPSGTAS DRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA
Sbjct: 1   MCPSGTAS-DRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA 60

Query: 82  ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSI 141
           ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSH DLKSYMHLAGFSI
Sbjct: 61  ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHADLKSYMHLAGFSI 120

Query: 142 SDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY 177
           SDEEVTAMIRFGGGDESDGVCYEGLLKILA+DNMY
Sbjct: 121 SDEEVTAMIRFGGGDESDGVCYEGLLKILAIDNMY 154

[Close]

BLAST of CsaV3_3G015240 vs. ExPASy TrEMBL
Match: A0A1S3AXP3 (calmodulin OS=Cucumis melo OX=3656 GN=LOC103483899 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.7e-79
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 22  MCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA 81
           MCPSGTAS DRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA
Sbjct: 1   MCPSGTAS-DRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA 60

Query: 82  ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSI 141
           ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSH DLKSYMHLAGFSI
Sbjct: 61  ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHADLKSYMHLAGFSI 120

Query: 142 SDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY 177
           SDEEVTAMIRFGGGDESDGVCYEGLLKILA+DNMY
Sbjct: 121 SDEEVTAMIRFGGGDESDGVCYEGLLKILAIDNMY 154

[Close]

BLAST of CsaV3_3G015240 vs. ExPASy TrEMBL
Match: A0A6J1IQ64 (calmodulin-A-like OS=Cucurbita maxima OX=3661 GN=LOC111479504 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.5e-63
Identity = 133/155 (85.81%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 22  MCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA 81
           MCPSGTA+   SD A   FRQAFE LDADHDGKISRDDLRKFYS   DADEDAI SMIA 
Sbjct: 1   MCPSGTAA-SYSDTAP-AFRQAFEALDADHDGKISRDDLRKFYS--KDADEDAIRSMIAV 60

Query: 82  ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSI 141
           ADLNRNG VEYEEFERVLS GRRRSTGIMEEVFKTMDKDGDGRLSH DLKSYMH AGFSI
Sbjct: 61  ADLNRNGFVEYEEFERVLSSGRRRSTGIMEEVFKTMDKDGDGRLSHADLKSYMHFAGFSI 120

Query: 142 SDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY 177
           SDEEV AMI+FGGGDESDGV YEGLLKILAVDN+Y
Sbjct: 121 SDEEVEAMIKFGGGDESDGVSYEGLLKILAVDNVY 151

[Close]

BLAST of CsaV3_3G015240 vs. ExPASy TrEMBL
Match: A0A6J1GV73 (calmodulin-beta-like OS=Cucurbita moschata OX=3662 GN=LOC111457482 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.5e-63
Identity = 133/155 (85.81%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 22  MCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAA 81
           MCPSGTA+   SD A   FRQAFE LDADHDGKISRDDLRKFYS   DADEDAI SMIA 
Sbjct: 1   MCPSGTAA-SYSDTAP-AFRQAFEALDADHDGKISRDDLRKFYS--KDADEDAIRSMIAV 60

Query: 82  ADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSI 141
           ADLNRNG VEYEEFERVLS GRRRSTGIMEEVFKTMDKDGDGRLSH DLKSYMH AGFSI
Sbjct: 61  ADLNRNGFVEYEEFERVLSSGRRRSTGIMEEVFKTMDKDGDGRLSHADLKSYMHFAGFSI 120

Query: 142 SDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY 177
           SDEEV AMIRFGGGDESDGV YEGLLKIL+VDN+Y
Sbjct: 121 SDEEVEAMIRFGGGDESDGVSYEGLLKILSVDNVY 151

[Close]

BLAST of CsaV3_3G015240 vs. TAIR 10
Match: AT5G49480.1 (Ca2+-binding protein 1 )

HSP 1 Score: 169.5 bits (428), Expect = 2.5e-42
Identity = 85/157 (54.14%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 22  MCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSG---GGDADEDAIGSM 81
           MCPSG  +   +  A+  FR AFE++D DHDGKIS DDLR FY+G   G + DE  IG+M
Sbjct: 1   MCPSGRIAIPITTTANPNFRPAFEIIDTDHDGKISSDDLRAFYAGIPSGENNDETMIGTM 60

Query: 82  IAAADLNRNGVVEYEEFERVLS------GGRRRSTGIMEEVFKTMDKDGDGRLSHGDLKS 141
           I+ AD N++G VE++EFE+VL        G     G+M++VFK MDKDGDGRLS+GDLKS
Sbjct: 61  ISVADANKDGFVEFDEFEKVLETTPFSRSGNGGDDGLMKDVFKVMDKDGDGRLSYGDLKS 120

Query: 142 YMHLAGFSISDEEVTAMIRFGGGDESDGVCYEGLLKI 170
           YM  AG +++D+E+ +MIR  GGD +DGV ++GLLKI
Sbjct: 121 YMDSAGLAVTDDEIKSMIRLAGGDLNDGVSFDGLLKI 157

[Close]

BLAST of CsaV3_3G015240 vs. TAIR 10
Match: AT5G21274.1 (calmodulin 6 )

HSP 1 Score: 65.1 bits (157), Expect = 6.6e-11
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 0


Query: 29  SDDRSDVASVGFRQAFEVLDADHDGKISRDDL-RKFYSGGGDADEDAIGSMIAAADLNRN 88
           +D  +D     F++AF + D D DG I+  +L     S G +  E  +  MI   D + N
Sbjct: 2   ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61

Query: 89  GVVEYEEFERVLSGGRR--RSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSISDEE 148
           G +++ EF  +++   +   S   ++E F+  DKD +G +S  +L+  M   G  +SDEE
Sbjct: 62  GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDEE 121

Query: 149 VTAMIRFGGGDESDGVCYEGLLKIL 171
           V  MIR    D    + YE  +K++
Sbjct: 122 VDEMIREADVDGDGQINYEEFVKVM 146

[Close]

BLAST of CsaV3_3G015240 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 64.7 bits (156), Expect = 8.6e-11
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 0


Query: 29  SDDRSDVASVGFRQAFEVLDADHDGKISRDDL-RKFYSGGGDADEDAIGSMIAAADLNRN 88
           +D  +D     F++AF + D D DG I+  +L     S G +  E  +  MI   D + N
Sbjct: 2   ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61

Query: 89  GVVEYEEFERVLSGGRR--RSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSISDEE 148
           G +++ EF  +++   +   S   ++E F+  DKD +G +S  +L+  M   G  ++DEE
Sbjct: 62  GTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121

Query: 149 VTAMIRFGGGDESDGVCYEGLLKIL 171
           V  MIR    D    + YE  +KI+
Sbjct: 122 VEEMIREADVDGDGQINYEEFVKIM 146

[Close]

BLAST of CsaV3_3G015240 vs. TAIR 10
Match: AT5G37780.1 (calmodulin 1 )

HSP 1 Score: 64.7 bits (156), Expect = 8.6e-11
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 0


Query: 29  SDDRSDVASVGFRQAFEVLDADHDGKISRDDL-RKFYSGGGDADEDAIGSMIAAADLNRN 88
           +D  +D     F++AF + D D DG I+  +L     S G +  E  +  MI   D + N
Sbjct: 2   ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61

Query: 89  GVVEYEEFERVLSGGRR--RSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSISDEE 148
           G +++ EF  +++   +   S   ++E F+  DKD +G +S  +L+  M   G  ++DEE
Sbjct: 62  GTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121

Query: 149 VTAMIRFGGGDESDGVCYEGLLKIL 171
           V  MIR    D    + YE  +KI+
Sbjct: 122 VEEMIREADVDGDGQINYEEFVKIM 146

[Close]

BLAST of CsaV3_3G015240 vs. TAIR 10
Match: AT3G43810.1 (calmodulin 7 )

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10
Identity = 43/145 (29.66%), Postives = 73/145 (50.34%), Query Frame = 0


Query: 29  SDDRSDVASVGFRQAFEVLDADHDGKISRDDL-RKFYSGGGDADEDAIGSMIAAADLNRN 88
           +D  +D     F++AF + D D DG I+  +L     S G +  E  +  MI   D + N
Sbjct: 2   ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61

Query: 89  GVVEYEEFERVLSGGRR--RSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSISDEE 148
           G +++ EF  +++   +   S   ++E F+  DKD +G +S  +L+  M   G  ++DEE
Sbjct: 62  GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEE 121

Query: 149 VTAMIRFGGGDESDGVCYEGLLKIL 171
           V  MIR    D    + YE  +K++
Sbjct: 122 VDEMIREADVDGDGQINYEEFVKVM 146

The following BLAST results are available for this feature:

BLAST of CsaV3_3G015240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134248.2	5.8e-94	100.00	calcium-binding protein CP1 [Cucumis sativus] >KGN57174.1 hypothetical protein C...	[more]
XP_008438964.1	1.2e-78	98.06	PREDICTED: calmodulin [Cucumis melo] >KAA0049553.1 calmodulin [Cucumis melo var....	[more]
XP_038891278.1	1.3e-69	89.68	calcium-binding protein CP1 [Benincasa hispida]	[more]
XP_022955465.1	3.1e-63	85.81	calmodulin-beta-like [Cucurbita moschata]	[more]
XP_022979972.1	3.1e-63	85.81	calmodulin-A-like [Cucurbita maxima]	[more]

BLAST of CsaV3_3G015240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FDX6	3.5e-41	54.14	Calcium-binding protein CP1 OS=Arabidopsis thaliana OX=3702 GN=CP1 PE=2 SV=1	[more]
A8CEP3	1.1e-10	30.82	Calmodulin OS=Saccharina japonica OX=88149 GN=cam PE=2 SV=1	[more]
O94739	1.4e-10	31.51	Calmodulin OS=Pleurotus ostreatus OX=5322 GN=CMD1 PE=2 SV=3	[more]
P02599	1.9e-10	32.37	Calmodulin OS=Dictyostelium discoideum OX=44689 GN=calA PE=1 SV=3	[more]
Q71UH5	1.9e-10	30.82	Calmodulin OS=Globisporangium splendens OX=82926 PE=2 SV=1	[more]

BLAST of CsaV3_3G015240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L828	2.8e-94	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G167380 PE=4 SV=1	[more]
A0A5D3CXZ4	5.7e-79	98.06	Calmodulin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001590 PE...	[more]
A0A1S3AXP3	5.7e-79	98.06	calmodulin OS=Cucumis melo OX=3656 GN=LOC103483899 PE=4 SV=1	[more]
A0A6J1IQ64	1.5e-63	85.81	calmodulin-A-like OS=Cucurbita maxima OX=3661 GN=LOC111479504 PE=4 SV=1	[more]
A0A6J1GV73	1.5e-63	85.81	calmodulin-beta-like OS=Cucurbita moschata OX=3662 GN=LOC111457482 PE=4 SV=1	[more]

BLAST of CsaV3_3G015240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49480.1	2.5e-42	54.14	Ca2+-binding protein 1	[more]
AT5G21274.1	6.6e-11	30.34	calmodulin 6	[more]
AT1G66410.1	8.6e-11	30.34	calmodulin 4	[more]
AT5G37780.1	8.6e-11	30.34	calmodulin 1	[more]
AT3G43810.1	1.5e-10	29.66	calmodulin 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 74..102 e-value: 1.1 score: 17.5 coord: 39..67 e-value: 0.021 score: 24.0 coord: 109..137 e-value: 0.038 score: 23.1
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 41..98 e-value: 1.7E-12 score: 47.6
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 111..131 e-value: 0.001 score: 18.4
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 35..70 score: 12.114401
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 105..140 score: 12.755995
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 40..95 e-value: 5.29651E-11 score: 53.7057
None	No IPR available	GENE3D	1.10.238.10		coord: 24..175 e-value: 2.6E-27 score: 97.4
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 22..175
None	No IPR available	PANTHER	PTHR23050:SF392	CALMODULIN-RELATED PROTEIN 97A-LIKE	coord: 22..175
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 118..130
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 48..60
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 40..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G015240.1	CsaV3_3G015240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding