CsaV3_3G015240 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CATTCAGTTCCAAACAACATGGGCCCAACAGACCGGGTAACCCCGAAATTCCCCTCTCCCTATAAAACCCCTTCCCCCTCTCTTCATGTGTCCACAACTTTTCTCCCAAATTTCCTCTTTCATTTCATATCGTCTCTATTTTTCAGCCATGTGCCCTTCCGGTACCGCCTCCGACGATCGTTCTGACGTTGCGTCCGTCGGTTTCCGTCAGGCATTCGAGGTACTCGACGCCGACCACGACGGAAAGATTAGCCGCGACGATCTTCGTAAATTCTACAGCGGCGGCGGCGATGCCGACGAAGATGCAATTGGGTCAATGATAGCCGCTGCGGACTTGAATCGGAACGGAGTTGTAGAGTATGAGGAGTTCGAGCGCGTATTGTCCGGGGGACGGAGGAGATCGACGGGGATTATGGAGGAGGTGTTTAAGACGATGGATAAAGATGGAGATGGACGGTTGAGCCATGGCGACTTGAAGAGCTATATGCATTTGGCTGGATTTTCGATATCTGATGAAGAGGTAACGGCGATGATTAGGTTTGGCGGTGGAGATGAATCGGACGGCGTTTGTTATGAAGGATTGCTCAAGATTTTGGCCGTTGATAATATGTATTAATTAGTTCATATATTGATATGTATATTTTTTTGGGTGTGGTTGAGATCTGAGGTTTCCAAGAAATGCATTTCTGGAAAATGTTTGTCTTCTTATTGTAAAAAGTCCTTCTCTGGGAGGGGAAAAACGTTTTTAATAAAAAGCGTTTATTTCTTGAGCCGTTCTTGTTGTGCTTTAGGTGTTACTAATCCTAAAGCTCTTGTATGTAAATTTGAAGTTTACTCAATAAATTTTAGTGTTTTGAGAGTAGAAAAATGAAAGAGTGACAAAGAAATAGGAAATGCTTAAATTTCCTATCATTCATTCGATTTAAAAGGTGAATGAAAACATATTTGAATATTTAAAAATAAGCAAACTATTTT ATGTGTCCACAACTTTTCTCCCAAATTTCCTCTTTCATTTCATATCGTCTCTATTTTTCAGCCATGTGCCCTTCCGGTACCGCCTCCGACGATCGTTCTGACGTTGCGTCCGTCGGTTTCCGTCAGGCATTCGAGGTACTCGACGCCGACCACGACGGAAAGATTAGCCGCGACGATCTTCGTAAATTCTACAGCGGCGGCGGCGATGCCGACGAAGATGCAATTGGGTCAATGATAGCCGCTGCGGACTTGAATCGGAACGGAGTTGTAGAGTATGAGGAGTTCGAGCGCGTATTGTCCGGGGGACGGAGGAGATCGACGGGGATTATGGAGGAGGTGTTTAAGACGATGGATAAAGATGGAGATGGACGGTTGAGCCATGGCGACTTGAAGAGCTATATGCATTTGGCTGGATTTTCGATATCTGATGAAGAGGTAACGGCGATGATTAGGTTTGGCGGTGGAGATGAATCGGACGGCGTTTGTTATGAAGGATTGCTCAAGATTTTGGCCGTTGATAATATGTATTAA ATGTGTCCACAACTTTTCTCCCAAATTTCCTCTTTCATTTCATATCGTCTCTATTTTTCAGCCATGTGCCCTTCCGGTACCGCCTCCGACGATCGTTCTGACGTTGCGTCCGTCGGTTTCCGTCAGGCATTCGAGGTACTCGACGCCGACCACGACGGAAAGATTAGCCGCGACGATCTTCGTAAATTCTACAGCGGCGGCGGCGATGCCGACGAAGATGCAATTGGGTCAATGATAGCCGCTGCGGACTTGAATCGGAACGGAGTTGTAGAGTATGAGGAGTTCGAGCGCGTATTGTCCGGGGGACGGAGGAGATCGACGGGGATTATGGAGGAGGTGTTTAAGACGATGGATAAAGATGGAGATGGACGGTTGAGCCATGGCGACTTGAAGAGCTATATGCATTTGGCTGGATTTTCGATATCTGATGAAGAGGTAACGGCGATGATTAGGTTTGGCGGTGGAGATGAATCGGACGGCGTTTGTTATGAAGGATTGCTCAAGATTTTGGCCGTTGATAATATGTATTAA MCPQLFSQISSFISYRLYFSAMCPSGTASDDRSDVASVGFRQAFEVLDADHDGKISRDDLRKFYSGGGDADEDAIGSMIAAADLNRNGVVEYEEFERVLSGGRRRSTGIMEEVFKTMDKDGDGRLSHGDLKSYMHLAGFSISDEEVTAMIRFGGGDESDGVCYEGLLKILAVDNMY* Homology
BLAST of CsaV3_3G015240 vs. NCBI nr
Match: XP_004134248.2 (calcium-binding protein CP1 [Cucumis sativus] >KGN57174.1 hypothetical protein Csa_009868 [Cucumis sativus]) HSP 1 Score: 354.4 bits (908), Expect = 5.8e-94 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. NCBI nr
Match: XP_008438964.1 (PREDICTED: calmodulin [Cucumis melo] >KAA0049553.1 calmodulin [Cucumis melo var. makuwa] >TYK16230.1 calmodulin [Cucumis melo var. makuwa]) HSP 1 Score: 303.5 bits (776), Expect = 1.2e-78 Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. NCBI nr
Match: XP_038891278.1 (calcium-binding protein CP1 [Benincasa hispida]) HSP 1 Score: 273.5 bits (698), Expect = 1.3e-69 Identity = 139/155 (89.68%), Postives = 143/155 (92.26%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. NCBI nr
Match: XP_022955465.1 (calmodulin-beta-like [Cucurbita moschata]) HSP 1 Score: 252.3 bits (643), Expect = 3.1e-63 Identity = 133/155 (85.81%), Postives = 136/155 (87.74%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. NCBI nr
Match: XP_022979972.1 (calmodulin-A-like [Cucurbita maxima]) HSP 1 Score: 252.3 bits (643), Expect = 3.1e-63 Identity = 133/155 (85.81%), Postives = 136/155 (87.74%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. ExPASy Swiss-Prot
Match: Q9FDX6 (Calcium-binding protein CP1 OS=Arabidopsis thaliana OX=3702 GN=CP1 PE=2 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 3.5e-41 Identity = 85/157 (54.14%), Postives = 112/157 (71.34%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. ExPASy Swiss-Prot
Match: A8CEP3 (Calmodulin OS=Saccharina japonica OX=88149 GN=cam PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.1e-10 Identity = 45/146 (30.82%), Postives = 75/146 (51.37%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. ExPASy Swiss-Prot
Match: O94739 (Calmodulin OS=Pleurotus ostreatus OX=5322 GN=CMD1 PE=2 SV=3) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10 Identity = 46/146 (31.51%), Postives = 74/146 (50.68%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. ExPASy Swiss-Prot
Match: P02599 (Calmodulin OS=Dictyostelium discoideum OX=44689 GN=calA PE=1 SV=3) HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10 Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. ExPASy Swiss-Prot
Match: Q71UH5 (Calmodulin OS=Globisporangium splendens OX=82926 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10 Identity = 45/146 (30.82%), Postives = 75/146 (51.37%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. ExPASy TrEMBL
Match: A0A0A0L828 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G167380 PE=4 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 2.8e-94 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. ExPASy TrEMBL
Match: A0A5D3CXZ4 (Calmodulin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001590 PE=4 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 5.7e-79 Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. ExPASy TrEMBL
Match: A0A1S3AXP3 (calmodulin OS=Cucumis melo OX=3656 GN=LOC103483899 PE=4 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 5.7e-79 Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. ExPASy TrEMBL
Match: A0A6J1IQ64 (calmodulin-A-like OS=Cucurbita maxima OX=3661 GN=LOC111479504 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.5e-63 Identity = 133/155 (85.81%), Postives = 136/155 (87.74%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. ExPASy TrEMBL
Match: A0A6J1GV73 (calmodulin-beta-like OS=Cucurbita moschata OX=3662 GN=LOC111457482 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.5e-63 Identity = 133/155 (85.81%), Postives = 136/155 (87.74%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. TAIR 10
Match: AT5G49480.1 (Ca2+-binding protein 1 ) HSP 1 Score: 169.5 bits (428), Expect = 2.5e-42 Identity = 85/157 (54.14%), Postives = 112/157 (71.34%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. TAIR 10
Match: AT5G21274.1 (calmodulin 6 ) HSP 1 Score: 65.1 bits (157), Expect = 6.6e-11 Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 ) HSP 1 Score: 64.7 bits (156), Expect = 8.6e-11 Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. TAIR 10
Match: AT5G37780.1 (calmodulin 1 ) HSP 1 Score: 64.7 bits (156), Expect = 8.6e-11 Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 0
BLAST of CsaV3_3G015240 vs. TAIR 10
Match: AT3G43810.1 (calmodulin 7 ) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10 Identity = 43/145 (29.66%), Postives = 73/145 (50.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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