CsaV3_2G028860 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TATAAGCAAATATAGTATAAACTAATTTAAGATTTATTGAAAGTTAAATTGAAAAATGAAAGTTAATTTAAATTTGAAAACATTGATGGCGGGTTCGTCAAATATTTGTAAACTTGAAGCTGATTTGCATGGAAAATTTCAGTTCTTATTACAATTTACAATCAAATGTCCATCAAATTTGAACATTTATCGCTCCCAACTTCCAAATTCTTCATATACACAAACCTTCTCAAATTTCTTTTCTGTATTTGGATATTTCTCCATTGTTATTAATACAGAGTTTCAACCTCTTTTCCTTTGCTACTACCACTGTAGCGGCAGCCATGGGGTTGGAGCTTTCCTGGATTCTCGTCCTCAGAATCACTTGACTCCATTAAAAGCCCTTCCAGGCATCTTCGTCTTATTCTGGGGTCATACGTAACCTTCTCGGCAGGTGTCGCTATGTATTTTGATTTTCTAGTATGATGATCAGACTCTAATTCATCTTGACAATTTGTTGGTTCTCCTGGGAATTTCAACTTGATTCCTGGATTATTTTCGGTAAATGAGGTGTTGAACGTGATTGAGTTGTTGATACCTTGTACATTGAGGTTGATGTATAATTCCAGGGGTGGTGGATCTGGATTCTCTTCTGTTGTTGAATCTTTCGCTGTTTCGTTGTTTGAATTTTCTTTGATGTCTGTGGAACTTTCAGGGCTTTGATCTGGATTACTTTTGTAATGATGGTTGACGTGGATTGAGCTTTCGCTTTTGGCTTCGTCGGAGAGTAAGTGCATTGATGTTCCTTTGTTATCGCCGATCATTGTTGTGAGACTCTTTGGATTTTCTTCATCTGAATATTTGATGTTTAGTTTGTTAAAAGCTTTGGATAGGTCTTCCATGGATTCGTCTTGTTGTGTGTTATTTTCTGGTTCAAATGATGAACGACTTTTGGAAGATGTGATTAATGTGCTTCTAGATGCTTTGGTTTGAAATGCATTGGTTGTCTTTGCCCCATCTTCCTTAGTTTCTTTTGACTCTGTTTGTGATTCTAGAGAGGAATCTAAGCCCTTTTCTATGGCTTGATCAGATTGTGTGGGGTTTTCAGAAGAGTCCTTGTACGAATGAGGATTGGAAGTGTTCTTAGAAGCAAGCTCTTCCTTATTTTCGTTCTTGGATGTCAGCTCTTCCTTGGTTTCATGCTGAGTTTTTGATTCTTCCAATTCCACTGGTTTCACGTTTGGTTTCGGGGACTTCTTTGATTCGGCTTGTATCTGACTTTCTCCACTTGTAGGTATAGCTTTTGGGGATGGATTTGCGGGATCGGAAAGGATTCTATCTGTTGTTTGGTCTCCAATGGATGCAGTAGGTTCAATAGGCTGTTGTGAGGTTGATTGTGCAGTAGGTTTTCTAGACAAATGAGATGGAGACTGAACCCGGAAGGTTTTTTCTGATGGTGGTTGTAGAGAATTTTCTTGAGATGGCGACCGTGGCGGCATAGAAGAATCTTGAGATGGAAATTTTAACTTAGAAGATGATGAAGGCTGAGAATCAGCTTTAAATCTTGATTGCGATAATGATGGTTTTAAATTTGGATGGTGTTGAATTCCAATGGTTGCAGGAGATTCAGTAGGCTGTTGTGTTGTTGATTGTGCAGTAGATTTTCTGGACGAATGAGATGGAGATTGAACCCGAGAGGTTTTAACCGATGGTTGTTGTCGGGAAATTTCATGAGATGGCGACCGTGGTGGCGTAGAAAAATCTTGAGATGGAAATGTTGATCTTGAAGACGGTGAAGGGTGAGAATCAGCTTTAAATCTTGATTGTGATGGCTGTTTTGAATTTGGATGGCTTTGAATTCGAATGGTTGCAGGAGACTCAACAGGTTGTTTTGATGTTGATTGTGTAGTGGGTTTTCTGGACAAATTAGATGGAGACTGAACCCGAGAGGTTTTTTCCGATGATTGTTGTCGAGAATCTTCTTGAGATAGCGACTGTGCCGGCAGAGACGGATCTCGAGATGGAAGTGCTGACCTTGAAGACGATGAAGGCTGAGAATCAGCTTTAACTTTTAATTGTGAAGTTGGTTTTGAATTTGGATGCTTTTTATTGGATGTTTGAGATGATGAAGACGACGCCTTTGAAGCAATCCGAGGAGGTGTAGCTGCAACTGTTGCAGGCGATGAAGGCTTTGAAGAAGCATCCTTTGAAGGGGAGAAAACTTTGCCTGCTGGTGATGACGGCTTTGAACTATCCTGAGACTGGGATCCCTTGCCTGATGTTGAAGGCTTGTCGGAAGCAACTGAAAATTGAGGAATTGCTTTCGATGATGATGAAGGCTTGGAAGCTGCTCGAGACCGGTTTTTGGCTCGAGTTGTTGATGGCTGAGAATGAACTTTGCCTGCCTTGTGAGATTTTGAAGGCGGCATAGTTTCACTTCTTTCAGCTGCCTGAGCTGTTGCTAGAGGAGGTTCTTCTGGTTTTGTCTCAGGAGACTGATCTGGTTGGTGTCGAATATTCGGCACAGTATCGGCTGCAGAAGCAGAACCTTCGGATTCATCTGTAGGCCCAAAACTCCGTTCTGGCGACTCATTTGCAGAACGAGAAGAAGCTTTTAACGATTGCCAAGGAAGTAGAATGCGCAATTGTGAAAGTGACATAACAGACAATAAAGGAATGCTGGGGTTTATCAATGAAGTTATCCTATCCAAAGCAATATATAATTTGGCATTGGATACTTTGGAAACATGCCAACTTTTGCACTAGCTTTTCCTTCAGAACTTCCTTCTTTAGCTTTCTTTTACCTTTCTGTTCAAAAAGGAATATAGGATGGATGGTTTTGCCTTCTCAAATAAGATATTTCCTTCTTAAATGAGCGAAAACATCATATTCAATCCTAAAGTTTACAGTTGCATTTACCTTTGATTTTCAATTGCGTAGGGATGACAACGAGACGAGGAAAATTTGTCCGCATTTTCTAACCAGACTGAAGACTTTCGTTTTGGTTCGTGCTGGATCTCGACAAGGCATTGCTCCAAAAACCTTACCATCCGTAAGTCTACTTTCTTTCTTTACCCCCCTACCAAGTAAAGAAGAAGGAATCCCCTTTTCCTTGGAGGCATTACACTTTTTGTGGTAAAATCAAAATGAATTGGCTTAAGACTTAAGATGTACATAGAGAAGCAAAGGCTTTTGTGCCTAAAAGAAAAGGGGGATTTGGTTTGGATAGAGAAGATCGGAAGAAAGTTTTGGAAATGCAAAAGAAAACATGACTCTTTAAGTTTAGATGGCACAAGAATATATTCCACATTTGAGAAAATATAATTCTAAACATTTGGTATCTTTTAAGATTTTTTTAGTAATAATATTGTTTTTAAAAATGAAAATACTAATAATTTTTTTATTTTAAAACATAATTTTAAATTACAAGTAACATATACTATTGCTTCTATTTTTTTACTGTTTATAATTCATTCACTTTTTTTATATACATATTTATCTCTCATGTTTCTTTGTTAGAAAATTAAAATCAGAATCAATACATTTTTAGGCTTTTATGCTTTTATGTATTAAGCATTCATACCTCTTACCCATTCCAAATAGCGTTTTTTGATGAAAACATTATGAAGAAAGCAAAAAAAAAAAAAAAAAAAGGGTGCAATAACTCCACCCAAAATCAACCCAAGGATCAATATCGGTGGACGCTATATCCCAAGCCACATGTAATATTTTTTTCCTGTTCTTCATTTTGATAATTGAAGCAAAGAATATGTTTACTAATCGCAATGTTAATTGAAAAGTAGTTTCTTGATGAAATCAATTAGGATCAATAATGATTGCAAAGACATTCTTGTAAAGCAAAGAATAGTGTGCACTAATCAAATTAGTTTCATAATGAGATGAACGATAATTACAAGTTATTCTTGTTTATCCTATTTCAAAATGTTCGTGCGTTCATCTTCAAACAGAGCTTCCTATCACAGTCCAATCCAGATCCTAGGTCAATTATCGTACTAATCTTCACAAAGTTTTTCAATTGTAATAGAAACGACCAAATGAAAATTTATTCAAATTAACTAATGATTTCCTTTCAAACTTTTGATGAACAGATCTAAAATGCAGGGGGTCATGAGAGCAGTACGATCATGGCAAGAGACGTTAAAGAAGATCACGGTCATGCAACATTCGTATAGAAGAGAGATGAGTAAAGTGAAAAATATCTTGGAAGGATTGGAACTAGAAGGTGGTTCATCTTCCTCACTGAAAAGTTTGGAGAATATTACTGTCAGAGAGATCGTTTCGAAAAAGGGAGAAGGAGGTATTGGCTCCTCCTGGATATCCTGTAGGGCAGAGGATACTGCAATTGACGCTGTGCAAAATGTAGGGAGTTTTGTTTGGTTTTTGCCATTTTCAAAAGCAGGAATGTTTTTTCCTTGGAAGAATGAGGACTTCTTCTTTGTTGCAGATGGCTAGACATAACATTGGATCTTTGGTGGTGATGAAGTCTGAAGGAGAAAACATAGCTGGGATTGTTACAGAACGAGGTAAACCTAAAGGCTACCCTGATGGATAATAATTGTTTTTTTCCTCTCAAACTTATTTCAATGTATTATTACTTTCTTAAATTTGAAAAAAAAATTGTTTGGTCCTAGGATTTCAAAATGTTAGGTGTTTGGAGTAAGGTGTAAAATAGTAAGGAGTAAGGTTATAAATTCCTAGACCTCACTGTTGATTTGATAAGATATAATTAAATTGATAGTTCTTATAAATTAATAAACAAACATTAACACTAAAAACTTAAGGCAAGTATTAAGTGAGAAATCAATGTAAGTTTAAATAATCCAACCTAAGGATCAAATAGAAACAAAACTCAAATTTAAGGGTAAAATTGTAACATTAAACCTACAGATAAATTGAAAATGAACTCAAACCTTAAAATTAAAGTGGGGTAAGTACGTAGCATTTTGAAACCTAAAGATCCAAGGGTAGTTTTTCGGGGAAGGAAAAGGAAGAAAGTAGGTTCTCCTTTGAGCTCTATTCCATGAATATCATCAACTTGGTGACTGCTGATTTCTGATGATCCTAAGCAGACTACCTGAAGAAAATAATAGCAGATGGGAGATCTCCCATATACACAAAAGTTGGAGAAATAATGACTCATGAGGTTATTTTCTGTCTTCCCTTGGCTACAAAACCAGTTTACAAACAACAGTTCTCAAGCATACATTTTTATTTTTCCATCAACAGGACAAACTAGTAACCATAACGTCGGACACGAACATCCTTAAAGCAATGCAGCTTATGACAGGTAAATACTAAATGTAGTTTAATTTAGATTCTGAAATTACCATTACAAAAAGGGAAGTCAGCTCCTTCTTCAGCTGCATCAACGATCATCCAAGAGGAGAATAATCCAGTTGAAGTTTTTGGCATTTGCAGAGAATCACATAAGACATATTCCTGTGATAGATGGAAAACTAGTTGGCATGATTTCTATTGTAGATGTTGCCAGAGCAGTTGTAAAGCAGCAAAATGGGGAACTTGAGCAACTAAACAACTATATAAAAGGAGAATATTATTAAAACTCAAATCTAAGAATCAGAAAATACACAATTCATGCAACAGAAACACTCTTTATTGAGAGACAGCCCGACAATGGATACCATGTAAAAGCAAAAGAAGGAAAAAGATTTAAAAGAAGTCAAAGCATAGTGTGAAATCTTTATATTTTATTTTATTTTATTTTTATATATATGTGAGTATGCACACGACCCTAAAATATTGGTTAGCCAGGAAACTCGCAAGAGGTAGGTGACTGGATTAAATCCGTTCCCTCCAGGTCCTTATTTAGTGGTCAATGAATAATAGTTTTTTTTCCATGTATTCTTATCTTATTAACTTCATGAAAAATACTACTCGTAAGGTATATGCAACCAAGAATATAGCATGGTTAAAGAAAACTAGAGAGGGGTTTAACCTATAATCAGTTGGGGGAAATAA ATGCAGGGGGTCATGAGAGCAGTACGATCATGGCAAGAGACGTTAAAGAAGATCACGGTCATGCAACATTCGTATAGAAGAGAGATGAGTAAAGTGAAAAATATCTTGGAAGGATTGGAACTAGAAGGTGGTTCATCTTCCTCACTGAAAAGTTTGGAGAATATTACTGTCAGAGAGATCGTTTCGAAAAAGGGAGAAGGAGGTATTGGCTCCTCCTGGATATCCTGTAGGGCAGAGGATACTGCAATTGACGCTGTGCAAAATATGGCTAGACATAACATTGGATCTTTGGTGGTGATGAAGTCTGAAGGAGAAAACATAGCTGGGATTGTTACAGAACGAGACTACCTGAAGAAAATAATAGCAGATGGGAGATCTCCCATATACACAAAAGTTGGAGAAATAATGACTCATGAGGACAAACTAGTAACCATAACGTCGGACACGAACATCCTTAAAGCAATGCAGCTTATGACAGAGAATCACATAAGACATATTCCTGTGATAGATGGAAAACTAGTTGGCATGATTTCTATTGTAGATGTTGCCAGAGCAGTTGTAAAGCAGCAAAATGGGGAACTTGAGCAACTAAACAACTATATAAAAGGAGAATATTATTAA ATGCAGGGGGTCATGAGAGCAGTACGATCATGGCAAGAGACGTTAAAGAAGATCACGGTCATGCAACATTCGTATAGAAGAGAGATGAGTAAAGTGAAAAATATCTTGGAAGGATTGGAACTAGAAGGTGGTTCATCTTCCTCACTGAAAAGTTTGGAGAATATTACTGTCAGAGAGATCGTTTCGAAAAAGGGAGAAGGAGGTATTGGCTCCTCCTGGATATCCTGTAGGGCAGAGGATACTGCAATTGACGCTGTGCAAAATATGGCTAGACATAACATTGGATCTTTGGTGGTGATGAAGTCTGAAGGAGAAAACATAGCTGGGATTGTTACAGAACGAGACTACCTGAAGAAAATAATAGCAGATGGGAGATCTCCCATATACACAAAAGTTGGAGAAATAATGACTCATGAGGACAAACTAGTAACCATAACGTCGGACACGAACATCCTTAAAGCAATGCAGCTTATGACAGAGAATCACATAAGACATATTCCTGTGATAGATGGAAAACTAGTTGGCATGATTTCTATTGTAGATGTTGCCAGAGCAGTTGTAAAGCAGCAAAATGGGGAACTTGAGCAACTAAACAACTATATAAAAGGAGAATATTATTAA MQGVMRAVRSWQETLKKITVMQHSYRREMSKVKNILEGLELEGGSSSSLKSLENITVREIVSKKGEGGIGSSWISCRAEDTAIDAVQNMARHNIGSLVVMKSEGENIAGIVTERDYLKKIIADGRSPIYTKVGEIMTHEDKLVTITSDTNILKAMQLMTENHIRHIPVIDGKLVGMISIVDVARAVVKQQNGELEQLNNYIKGEYY* Homology
BLAST of CsaV3_2G028860 vs. NCBI nr
Match: XP_031736873.1 (CBS domain-containing protein CBSX3, mitochondrial [Cucumis sativus] >KAE8652110.1 hypothetical protein Csa_022363 [Cucumis sativus]) HSP 1 Score: 399.1 bits (1024), Expect = 2.4e-107 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. NCBI nr
Match: XP_008444736.1 (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis melo] >XP_016900018.1 PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis melo] >XP_016900019.1 PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Cucumis melo]) HSP 1 Score: 348.6 bits (893), Expect = 3.7e-92 Identity = 183/206 (88.83%), Postives = 195/206 (94.66%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. NCBI nr
Match: KAA0065222.1 (CBS domain-containing protein CBSX3 [Cucumis melo var. makuwa]) HSP 1 Score: 344.0 bits (881), Expect = 9.2e-91 Identity = 183/207 (88.41%), Postives = 195/207 (94.20%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. NCBI nr
Match: XP_038884780.1 (CBS domain-containing protein CBSX3, mitochondrial [Benincasa hispida]) HSP 1 Score: 334.3 bits (856), Expect = 7.3e-88 Identity = 167/206 (81.07%), Postives = 190/206 (92.23%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. NCBI nr
Match: XP_023538057.1 (CBS domain-containing protein CBSX3, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 315.8 bits (808), Expect = 2.7e-82 Identity = 163/206 (79.13%), Postives = 184/206 (89.32%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. ExPASy Swiss-Prot
Match: Q9LEV3 (CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CBSX3 PE=1 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.2e-40 Identity = 84/155 (54.19%), Postives = 117/155 (75.48%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. ExPASy Swiss-Prot
Match: P32987 (Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens OX=2283 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12 Identity = 46/125 (36.80%), Postives = 72/125 (57.60%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. ExPASy Swiss-Prot
Match: P50100 (Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) OX=190192 GN=MK0525 PE=4 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 3.0e-12 Identity = 40/139 (28.78%), Postives = 81/139 (58.27%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. ExPASy Swiss-Prot
Match: Q9SJQ5 (CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana OX=3702 GN=CBSCBSPB2 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 9.1e-09 Identity = 47/178 (26.40%), Postives = 88/178 (49.44%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. ExPASy Swiss-Prot
Match: Q9LF97 (CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana OX=3702 GN=CBSCBSPB3 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 9.1e-09 Identity = 34/117 (29.06%), Postives = 64/117 (54.70%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. ExPASy TrEMBL
Match: A0A0A0LNN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361780 PE=4 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. ExPASy TrEMBL
Match: A0A1S4DVM5 (CBS domain-containing protein CBSX3, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487984 PE=4 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 1.8e-92 Identity = 183/206 (88.83%), Postives = 195/206 (94.66%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. ExPASy TrEMBL
Match: A0A5A7VA77 (CBS domain-containing protein CBSX3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005600 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 4.4e-91 Identity = 183/207 (88.41%), Postives = 195/207 (94.20%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. ExPASy TrEMBL
Match: A0A6J1KTQ7 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496322 PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 8.4e-82 Identity = 160/206 (77.67%), Postives = 185/206 (89.81%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. ExPASy TrEMBL
Match: A0A6J1GJI0 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454421 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 4.2e-81 Identity = 161/206 (78.16%), Postives = 183/206 (88.83%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. TAIR 10
Match: AT1G47271.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 202.6 bits (514), Expect = 3.1e-52 Identity = 101/158 (63.92%), Postives = 128/158 (81.01%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. TAIR 10
Match: AT5G10860.1 (Cystathionine beta-synthase (CBS) family protein ) HSP 1 Score: 167.9 bits (424), Expect = 8.4e-42 Identity = 84/155 (54.19%), Postives = 117/155 (75.48%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. TAIR 10
Match: AT2G36500.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein ) HSP 1 Score: 62.0 bits (149), Expect = 6.5e-10 Identity = 47/178 (26.40%), Postives = 88/178 (49.44%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. TAIR 10
Match: AT3G52950.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein ) HSP 1 Score: 62.0 bits (149), Expect = 6.5e-10 Identity = 34/117 (29.06%), Postives = 64/117 (54.70%), Query Frame = 0
BLAST of CsaV3_2G028860 vs. TAIR 10
Match: AT3G52950.2 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein ) HSP 1 Score: 62.0 bits (149), Expect = 6.5e-10 Identity = 34/117 (29.06%), Postives = 64/117 (54.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|