CsaV3_2G025700 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTATCATTGAGGAAGGACCTCTCTGTACTACTTCTCTTTAAACTTCCCTTCTAACTCTTTCTCTCTCTCTCTCTTTCTCTTTCTCTTTCTCTTCTACATATTTATATTTCTTTCTCTTGATGTCTCTGTAATTATTTCCTTCATTTGAAGCTTTCAAAACCACCCAACAGCTTAAAATTTTGATAGTATTACTGGGTTAATCGATCTAAGATGGCTCGGGTCATTGACGACTTTTAAGGCATTGAAATTGTTGTAAGAGATGAGATAATCGACGGGGGGGAATTTGAATCTGGGGTCTGTTTTCTTGGCTGATTCTGTAATTGATTTTTTTTTTTTTAATAAATTCGGAGTTGAATTTTTGGAGAAGAGACTTTGAGTTTTGAAGGTTTGATAATTGAAATCAATTCACTGTTTAAGGTCTTTGTTGTTCTGGGTTTAGATCTTATCTTCTGAAATTAGTTTCTAACTCTTGAAATTTTCGTTGTGCAGATAAATACAGAGCGATTTTAGTTGTTCGTTTGAGGGGTTTCTAAGAGATTTGTTACCTTTTTTGAAAGTGGAAGAAGAATTGGACTGAGAAAAATGCAAGCGATTATCGGACTCTGGGATTCGGATTTACATTTCGCTTGTTTTCTGCGGTGAAATAAGCAGATTTCTGTTCTTTGGAAGAGCTGATTCTTGGGGGGGAGGGGGGCAAACCCAGATCAGAAATTTCAGGTACTGATTGGTTATCTTCTTGGTGTATTTTGTAGGCTCTGTTCTTTCTGTTCTAATTATTTTCGTCCGAAATTTCAGGTCTGATTTTCTTCCTGTTCATTGCTACCTTCAGCATCCAATAGCTATCGCTTCCTCCTCTGTTCGAATTCTTAGGGTCTGATAATATGCTTTCAGAATTTAAAAATTCGAGTTGCTTCTTCCATGGAAGGATCTTCTATCTCTCTGTGAGCCATTGGGAAATCTGGATCCCCTGTTTCCATGTGAAATTCTTCTTGTTTCTTTGAGTTCCTCACATTTTCAAGATTTTCCCTCAAATTTCCTCTTAATTTCAGACCCAGCGTCTTCCCAATACTTTTCTTCAGAAACCCAGACCAGTTCGGCTTTTCAAATTTCGTGAATTCCGTCTTCGGATCATCGAGAAAACCCCATGTTCTGGTCTCTGACTGTTTGATGTTCTCCTCGAGTAAAGTTTTTACAGTGTTGATGGCGAAAACGTCATATTTCAGTGCTTGAAATTTCTAATCACCTTTGCTCTGTCCATTTTTCTTCGTAACTTCGGGATTTTCATCCGAATCCAATTGACTGCAGAACCTGCTTTTTATCCATTTCCCCTTTCGTTTCTCTTTGCTACTTTAATTGTAGAATCTTCTGAGTAATCTTTCTTCAGACTAACCCCCTTTTGAAATGGGACAGGTAGTGTATATATAATTAAGCATATGGAGAAAGAAAATCTCAGAATCAATAGCCATGGCAATTTCGTTAGTAATAATCTCAACGGGAGGGATAGAACCAGCGTGGACAGCTCGCTGTTGTTGCGAGCGAGATCCGAAGCCGCCGTTGTCGCCGTCGCAACGAGACCGCAGCCAACGCCGTCGGAATTTGTGTTACAATGGGGAAACCGGAAGCGTCTCCGGTGTATGAAAGTTCCGGTTAAGGCCAAGGATGTTTCCGCCGCAGCACCGGCTCACAGAACCACCGTCCGAGTGGACCGGCGAGTCGTTAGAGCCGATAAAGACTCGATTATACATAACCACCAACCAACTTCTAATCATAACCTTAATCCGAGTAATGGGTATTTGAATCTCCGTCAACGGCCGATTTCTCCTCAACCGCCAGTTCTACCGCCGCCGCCAGCTCCATCTCAGCGTATTCTAAGGTACTCTCTGTTTCTCTCTCTTTTCTTCAACGCCAATCTTTCGTAATTTCTTTTTTAATCTCTTTGATCGTTCAAATCTCATCCGATATTTGAGATTCCTTTTTCCCGGCTATGGGATTCAAAATCCCGATGTATTCTTTTAAATGGGCCTTTCTATTTGGGCTTTTATTTTATTGGGCTTTTTATTTGCTTGCTGTAACGCACTGCATATCTAAATATCTAAGAAACATATTATCGCTATTTATATACTCATATCATAATCAATATTTGACAACATAGTCTATGATTAACACTTATTGGCTACATTATTGTAAAAAAAAATTCAATAATCTTTCTTTTTCAAACAATAAAAAAATAATTGTATAAATGCAACTTGGTATTGGAATCTGATGAAATGATGAACCAAACATTGAAGGACGCAATTTAGCCTCGTTGATTAGGACACGTCTTCCATTTCTTCCACGTGTCGTTTTCACTGTGGAATAATAGCCGTCGGATCATCAATCGCAGTGACCACTGGTGTCCCCAGAGTGTCTCCAGATCGGCTGCCCTGGAGCGGACACGTAATCTCGAACTTGTAGATCCAAAGGCTGAGGTTGGGGCGAGGTAGTCATGATTTGAAAAGACAGGTTTGTCCTTAAGAAAAATCTAAGCCATTGAATGAAAGAATAGAGACGAAGTCCCCCATTTTGTACGCAAATTCTAAGCCAGATTTCCCCCAACGAACTCCAACATCCTCCAAGGTCATTCCCGTAATTTCAGCCCACGAACGTAAATAAATTAAATTTGCTTTTCTTCTTTTTTCCCTTTTTTTTTTTCTTCTTCTTTAATGAGTAATCTTTCAATCTTTCGTGAGATTTGTTCTTTAGGCCTTTTGTTTTGGTAATCTATGTGTGTATGTCTTGTGGGGTTGGGAGTCTTTTTTTTAAAAAAAAGAACTTTTTGGTGAAACTAAGTAGTAAACAAACAGAGACTGAGTTTTTGTTTTTAAAAAAATTTGATTAGGAACTCTGAGATTTCCGGTACGATGAGAGCCCAATCCAACGGCGGTGTCAGAGCAATTACTTCTCCGGACAGGGCAGCGCCGGAGAAAAAACCACCACCGTCTCATCACGACCACCACCATAAATCCGCCGCTACCTCAGACACAAAAAAAGGTGGGTCATCTTCCGGCAGCGGAGAACCAACTGCACCGCCGCAAGCGCTGCCGGTTTGGCCACCGAAGTTCGTAATAGCTTTAACGAACAAAGAGAAGGAAGAAGATTTCATGGCGATCAAAGGGTCAAAACTGCCTCAGAGACCTAAAAAACGAGCAAAAATTATTCAACGCACCATCAATGTAAGCAAAACACCAATCCCCCCGTCTTTACTTTTCCAGATTCGTTCTCTACCTTTTCTTTTATTGGTTTTAATTACTTTTTCTTCCTTAGTTACGAACTGATTCTCATGCGCTATAATTATTAATTATTAATTATTAATTATTAATATCATTATTACTTCTGCTTTAATTATTTATTTGAACCCTAATTTTCTTTTAATTTTCACCGAATATTTATTTCCTAGTAATTATTCAATGAGAGCATTAATTGAAAATAAAACGAAAAAGGGGGGTGTGGGGGTGAGAGAGAGATATTAAGGGGAGAGTTGTGGCAATGGAAGGTTGATGGAATGCCACGTGGAGAGATATGGTTTGAGTGTTATTTACCGGAAATGAAGGCATTGTGTGTGGGTGAATGAATGGTTTAACCAATTACTAGTCGACAGATAGACAATCGCTGAGTTGTCCCATCCTCGCCTTCAACAGTTGGGAGTCCTTTGGGTTTCTTTTTCTTTTATCTAAATAATCATGTTCACATTCAACCTTACTTTTTGTAATAAATTCTTAATTTCCCTCTTCCCTTTTACTTTTCTATAAATAATATTTGTAAAAGTATATTACATTTTGTTCAGGATTTATTTAATTTGTGTGTTGGTTTGGTGTTTGGTGTTTGGTGTTTGCTATTTGGTGGTGGCAGCTGGTGAGTCCGGGGACGTGGCTATGTGATTTAACGTTGGAGAGATACGAAGTAAGGGAGAAGAAAATTTCTAAAAAGGTATGTATTTTTTTTCTTCTATTTTTTGTGTTTATTAATTTGTGAATTGTAAGAATTGATTCTTGTTATTTGAATGTGTTTGGGATGCAGAGACCAAGAGGGCTTAAGGCAATAGTGAACATGGAGTCGGAGTCCGAGTGAGGAAAAGAGGAGAGTTTCTGATCACATACCAAATTAATTTAGAACCACTGTTTTGTTGTGATTTTGTGGAGAGGAGGGGAAGAAGCTTTTAATTATGTGAATTACATAAATATAAAATATATATATATATATATAAGTTGTAGATTTTCTCTTGGCTAATTGATTTTATTAGCATAATGAAATTGTAATTATTCTAATTTTTTAGTTCTAAGTTGATCCTTTTGATAACGGTTTTCAAGTAGAAATTACCAATTCTTAGATTGAAAATAGAAATGAGGGTGGAAGCTACATTTGTTTATGGATTAAAGAGCTTTTTCTTTTTTTCTTTTGTGTAAAGATATATTGGCTTATCAACTAACTTTTAGAAAAACAAATCCTCCAAGAATGAAAAAAACTCGGATTATCACTTTACTACAACTGCGTCAGTTGATTCTCTATCTTTTTTTTTTTCTTTCTCCTCATCCTTCTTCACATACTAAATCAAAAGCCTAATTTCCCGAAGTTCCCAACTTTAATTTCCCACACTTTACACCCACCCCTTCCTCTCCTTCAAACTATTTCT ATGGAGAAAGAAAATCTCAGAATCAATAGCCATGGCAATTTCGTTAGTAATAATCTCAACGGGAGGGATAGAACCAGCGTGGACAGCTCGCTGTTGTTGCGAGCGAGATCCGAAGCCGCCGTTGTCGCCGTCGCAACGAGACCGCAGCCAACGCCGTCGGAATTTGTGTTACAATGGGGAAACCGGAAGCGTCTCCGGTGTATGAAAGTTCCGGTTAAGGCCAAGGATGTTTCCGCCGCAGCACCGGCTCACAGAACCACCGTCCGAGTGGACCGGCGAGTCGTTAGAGCCGATAAAGACTCGATTATACATAACCACCAACCAACTTCTAATCATAACCTTAATCCGAGTAATGGGTATTTGAATCTCCGTCAACGGCCGATTTCTCCTCAACCGCCAGTTCTACCGCCGCCGCCAGCTCCATCTCAGCGTATTCTAAGGAACTCTGAGATTTCCGGTACGATGAGAGCCCAATCCAACGGCGGTGTCAGAGCAATTACTTCTCCGGACAGGGCAGCGCCGGAGAAAAAACCACCACCGTCTCATCACGACCACCACCATAAATCCGCCGCTACCTCAGACACAAAAAAAGGTGGGTCATCTTCCGGCAGCGGAGAACCAACTGCACCGCCGCAAGCGCTGCCGGTTTGGCCACCGAAGTTCGTAATAGCTTTAACGAACAAAGAGAAGGAAGAAGATTTCATGGCGATCAAAGGGTCAAAACTGCCTCAGAGACCTAAAAAACGAGCAAAAATTATTCAACGCACCATCAATCTGGTGAGTCCGGGGACGTGGCTATGTGATTTAACGTTGGAGAGATACGAAGTAAGGGAGAAGAAAATTTCTAAAAAGAGACCAAGAGGGCTTAAGGCAATAGTGAACATGGAGTCGGAGTCCGAGTGA ATGGAGAAAGAAAATCTCAGAATCAATAGCCATGGCAATTTCGTTAGTAATAATCTCAACGGGAGGGATAGAACCAGCGTGGACAGCTCGCTGTTGTTGCGAGCGAGATCCGAAGCCGCCGTTGTCGCCGTCGCAACGAGACCGCAGCCAACGCCGTCGGAATTTGTGTTACAATGGGGAAACCGGAAGCGTCTCCGGTGTATGAAAGTTCCGGTTAAGGCCAAGGATGTTTCCGCCGCAGCACCGGCTCACAGAACCACCGTCCGAGTGGACCGGCGAGTCGTTAGAGCCGATAAAGACTCGATTATACATAACCACCAACCAACTTCTAATCATAACCTTAATCCGAGTAATGGGTATTTGAATCTCCGTCAACGGCCGATTTCTCCTCAACCGCCAGTTCTACCGCCGCCGCCAGCTCCATCTCAGCGTATTCTAAGGAACTCTGAGATTTCCGGTACGATGAGAGCCCAATCCAACGGCGGTGTCAGAGCAATTACTTCTCCGGACAGGGCAGCGCCGGAGAAAAAACCACCACCGTCTCATCACGACCACCACCATAAATCCGCCGCTACCTCAGACACAAAAAAAGGTGGGTCATCTTCCGGCAGCGGAGAACCAACTGCACCGCCGCAAGCGCTGCCGGTTTGGCCACCGAAGTTCGTAATAGCTTTAACGAACAAAGAGAAGGAAGAAGATTTCATGGCGATCAAAGGGTCAAAACTGCCTCAGAGACCTAAAAAACGAGCAAAAATTATTCAACGCACCATCAATCTGGTGAGTCCGGGGACGTGGCTATGTGATTTAACGTTGGAGAGATACGAAGTAAGGGAGAAGAAAATTTCTAAAAAGAGACCAAGAGGGCTTAAGGCAATAGTGAACATGGAGTCGGAGTCCGAGTGA MEKENLRINSHGNFVSNNLNGRDRTSVDSSLLLRARSEAAVVAVATRPQPTPSEFVLQWGNRKRLRCMKVPVKAKDVSAAAPAHRTTVRVDRRVVRADKDSIIHNHQPTSNHNLNPSNGYLNLRQRPISPQPPVLPPPPAPSQRILRNSEISGTMRAQSNGGVRAITSPDRAAPEKKPPPSHHDHHHKSAATSDTKKGGSSSGSGEPTAPPQALPVWPPKFVIALTNKEKEEDFMAIKGSKLPQRPKKRAKIIQRTINLVSPGTWLCDLTLERYEVREKKISKKRPRGLKAIVNMESESE* Homology
BLAST of CsaV3_2G025700 vs. NCBI nr
Match: XP_004142918.1 (uncharacterized protein LOC101215839 [Cucumis sativus] >XP_011649544.1 uncharacterized protein LOC101215839 [Cucumis sativus] >XP_011649545.1 uncharacterized protein LOC101215839 [Cucumis sativus] >KGN62402.1 hypothetical protein Csa_018564 [Cucumis sativus]) HSP 1 Score: 587.4 bits (1513), Expect = 6.9e-164 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. NCBI nr
Match: XP_008444489.1 (PREDICTED: uncharacterized protein LOC103487794 [Cucumis melo] >XP_008444492.1 PREDICTED: uncharacterized protein LOC103487794 [Cucumis melo] >XP_016900059.1 PREDICTED: uncharacterized protein LOC103487794 [Cucumis melo] >XP_016900060.1 PREDICTED: uncharacterized protein LOC103487794 [Cucumis melo]) HSP 1 Score: 552.0 bits (1421), Expect = 3.2e-153 Identity = 283/300 (94.33%), Postives = 292/300 (97.33%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. NCBI nr
Match: XP_038885678.1 (uncharacterized protein LOC120075985 [Benincasa hispida]) HSP 1 Score: 528.1 bits (1359), Expect = 5.0e-146 Identity = 277/304 (91.12%), Postives = 289/304 (95.07%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. NCBI nr
Match: XP_023546112.1 (uncharacterized protein LOC111805325 [Cucurbita pepo subsp. pepo] >XP_023546113.1 uncharacterized protein LOC111805325 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 496.9 bits (1278), Expect = 1.2e-136 Identity = 265/306 (86.60%), Postives = 280/306 (91.50%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. NCBI nr
Match: XP_022997649.1 (uncharacterized protein LOC111492516 [Cucurbita maxima] >XP_022997650.1 uncharacterized protein LOC111492516 [Cucurbita maxima] >XP_022997651.1 uncharacterized protein LOC111492516 [Cucurbita maxima]) HSP 1 Score: 495.0 bits (1273), Expect = 4.7e-136 Identity = 264/306 (86.27%), Postives = 279/306 (91.18%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. ExPASy TrEMBL
Match: A0A0A0LNM6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351830 PE=4 SV=1) HSP 1 Score: 587.4 bits (1513), Expect = 3.4e-164 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. ExPASy TrEMBL
Match: A0A1S4DWI1 (uncharacterized protein LOC103487794 OS=Cucumis melo OX=3656 GN=LOC103487794 PE=4 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 1.6e-153 Identity = 283/300 (94.33%), Postives = 292/300 (97.33%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. ExPASy TrEMBL
Match: A0A6J1KC32 (uncharacterized protein LOC111492516 OS=Cucurbita maxima OX=3661 GN=LOC111492516 PE=4 SV=1) HSP 1 Score: 495.0 bits (1273), Expect = 2.3e-136 Identity = 264/306 (86.27%), Postives = 279/306 (91.18%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. ExPASy TrEMBL
Match: A0A5A7V0B3 (Homeobox protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001230 PE=4 SV=1) HSP 1 Score: 486.9 bits (1252), Expect = 6.2e-134 Identity = 258/300 (86.00%), Postives = 266/300 (88.67%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. ExPASy TrEMBL
Match: A0A6J1HEC4 (uncharacterized protein LOC111462716 OS=Cucurbita moschata OX=3662 GN=LOC111462716 PE=4 SV=1) HSP 1 Score: 485.7 bits (1249), Expect = 1.4e-133 Identity = 262/308 (85.06%), Postives = 278/308 (90.26%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. TAIR 10
Match: AT1G55340.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 135.2 bits (339), Expect = 8.8e-32 Identity = 96/250 (38.40%), Postives = 126/250 (50.40%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. TAIR 10
Match: AT1G55340.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 132.9 bits (333), Expect = 4.4e-31 Identity = 95/250 (38.00%), Postives = 131/250 (52.40%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. TAIR 10
Match: AT3G03880.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 110.2 bits (274), Expect = 3.0e-24 Identity = 89/250 (35.60%), Postives = 121/250 (48.40%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. TAIR 10
Match: AT4G20300.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 102.1 bits (253), Expect = 8.2e-22 Identity = 88/284 (30.99%), Postives = 131/284 (46.13%), Query Frame = 0
BLAST of CsaV3_2G025700 vs. TAIR 10
Match: AT4G20300.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 90.1 bits (222), Expect = 3.2e-18 Identity = 80/266 (30.08%), Postives = 118/266 (44.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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