CsaV3_2G025390 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G025390
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Gelsolin-related protein of 125 kDa isoform X1
Location	chr2: 17461906 .. 17464623 (+)
RNA-Seq Expression	CsaV3_2G025390
Synteny	CsaV3_2G025390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAATGCTAAGCATTAAAGTTTTCTCATATAACTATATGACTTTGAAAGATTAAACTTATTGAATATTATTGATAATGTTGTAATGTGATAAACATTTGAATTTTTTTATTGGCATATTTTCAAATATAAGAACGAAAATATTTACGAAGAAAAAAAAAGGCCATAATTTCTTCGTGCAAAAAAGAGAGAAAAACATTGAATAGGGAAAAGTGGGGAAAATGGGAACAACGAAGAAGAGAGAGTTTCGGTGAGAGACGGTTTCTTCCGCTTAAATGGTGAATCCGCCATTTCATCTACTCGCCAGAAGCGTTTCTTCGTATTATTGGTTGCAAATTCATGTTACAATAACACACCCGCATTCTCATCGCCTTTGAATTCTCCTCTGTTGGCGCGCCTTCAAGCTTAGGTAACTCTTCTGCCATTCAACACTCTTTTGGTACTATAATCAATCCTCTCAGATTTTGAGTTTCAATTCTTCATTTGATTTGATCCGAAGTGATTTCGACGAACTCTTGATCGGTTATATTTGCGAGATTTCGGCGGAGCTTCTTGTGAGTTGAAGGTAAGATATCTTCTACCTCAAACGCGAATTGTGATTCTTTTTTTAAAGTGATGAAGAGTAATTGAATTGACTGAATCGATGAAAAGCTCCGTTTCCTGTTCGAGCATTCGAATAGATTTTGTTTTGTTTGAAGTACATGTGGACTTAATTTCGCGGAATCGGTTAAAATCGACAAAATTCCTTTGTCTTTTAGTTTGAGTCTCACCTAACGAATCTTCTTATACGGTGATTATTATTAACAAAACCAACATGTTTTTTATCTTCTATGCAAAATTTCTGGCCGCTTTCACAAAAGCTTAATGATCGATGTTAATTTTGTTTAATAGTATTGAATAATTTGGTGAATAGACGAATAGATAGAGACTAACTAGAACAGGAAAAATTCTATAAGGAAAAATATTAGAAAAGGAAAATACTAATTAGGAAAAACCATCAATCATAATTTTCTTTAACAATAGGAAATTTCAGGAATTATCTTCGAAATTTTCTTTCCTAACGATTATGTTTTTCATTGCATAGCAAAAAGATCATTATTGTTCACAGAAAAGATAGATGAGAGTAAAATTAGTTTGAAGACTATCAAATCTTTCTCACTCTTTCCAACAGATCATTTGACTTATTTATATATAGATATCTTATGCATACTTCAACTAATCTCAAGAAAAAAGTTGGATAATAAGAAAACTCCAAGGAAAGTAACTCTAGGTAGGTTGCCACAGAGTTAATCTCTATCTGCTTGACATTAATCCCCATCTGTTTACTCTCTTGATATGGGCATAACTTTTGTTTGTGTTTTTCTTTAATCTACAGGATGAGTTCTAGACGACGGCCGTTGCAAACCTGTGGAGTTTCATTTCTTGCTGTAGCCCACAGCACCTGCTCAAGAGCTCAGAATCTTGATGGACGGTTGGGTTCAATAACAAGAAAAATGGTTTGGATTGCCAAGCTTATGAACCCTTTGATTTTTCTCCTGAAATATCAGAGCTTGTTGGTCCTCTGCTTTATTGATGATCGTTTACTAGCAATCGCAAACACTCTAGAGAAGATCTTTCCTCCATCCAAACTCGTTTTCGATAAGATTGACGTTCTTCTTCATCTGATTGAAACTTTTCCATCAAAATTTGACGATGCTGTTGACAAGATTCCCTGTTTCAACCAAGAAGTTCTGTTACTAGATTGGACAGTGACCCACGTCATATCTTTACTCAATTTCATGATAACCATACTAATGAACTGGGGGAGAGATGTAGCAAGAGAGAAGGAAATTTTGGTTGATATGAACTACAAAGAGAGTTGTAATGGATCTAAATCAATTGATAAATCTAAATGTTGCTCAGAAGGAATTGTTTCATCTCTTTCTGAGATACAACGAACTTCCATGAATGAGAAAATGAAATCCAACCCCATGAAGGGAAGTTATGCAGAAATTTTGAAAATGGGAACAAAAGGGGTACTGAAAGATGATGAAGGTTGCAAAGAGAATGAAAAGAAGGGAACAAGAGACGAAATCAACGAGAAAGAAGACTGCAAAAAGGACGAGAAGGGCAATTCTAATAGAGTGGAGAAGGGAATAGAAGTAATGGAAGATAAAGAAAGTTACAAAAAGGACGAGAATAATGAGATCCATAACGCTAAAATGGAAGAATCTGTGGGAAAAGCAAAAGGAAACGAAGAAATTCGAGATGATCAAAGCCATAAAAGGATCATAAATAATGAAGAGAAATCAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGGTGATGGATAATGAAAGTGAAAAGGGAAACAAAGGAAGCAAAGAGAATGCTGAGGATGAGATATTGGAATTGTTTGAGAGTGCTTGGCTTATGAAACCAACAATAAAGGGGAAAGGAAACGTGATGCAACGTTCATCTTCACTTTTCTGAAGAACTCTCGAGAGTTTGAAGTTTGCGGTCTTTGCAAAACTTGGTTTTTTGTATATTTTGTACAAAGAAATCTTGAATTTAATGCTGTACAAATGGAATTGTTTTTGTTCTTTTTAATTTACACAAAAGTCTTGAAGGTTTTGTTTTGTTTTTAATCATAATATACTTAAAATAAGCTCTTTGTTTCATTTTGATTGGGAATAATAATAAGATTTGTTACCCAACTTGAAGTTTAA

mRNA sequence

ATGAGTTCTAGACGACGGCCGTTGCAAACCTGTGGAGTTTCATTTCTTGCTGTAGCCCACAGCACCTGCTCAAGAGCTCAGAATCTTGATGGACGGTTGGGTTCAATAACAAGAAAAATGGTTTGGATTGCCAAGCTTATGAACCCTTTGATTTTTCTCCTGAAATATCAGAGCTTGTTGGTCCTCTGCTTTATTGATGATCGTTTACTAGCAATCGCAAACACTCTAGAGAAGATCTTTCCTCCATCCAAACTCGTTTTCGATAAGATTGACGTTCTTCTTCATCTGATTGAAACTTTTCCATCAAAATTTGACGATGCTGTTGACAAGATTCCCTGTTTCAACCAAGAAGTTCTGTTACTAGATTGGACAGTGACCCACGTCATATCTTTACTCAATTTCATGATAACCATACTAATGAACTGGGGGAGAGATGTAGCAAGAGAGAAGGAAATTTTGGTTGATATGAACTACAAAGAGAGTTGTAATGGATCTAAATCAATTGATAAATCTAAATGTTGCTCAGAAGGAATTGTTTCATCTCTTTCTGAGATACAACGAACTTCCATGAATGAGAAAATGAAATCCAACCCCATGAAGGGAAGTTATGCAGAAATTTTGAAAATGGGAACAAAAGGGGTACTGAAAGATGATGAAGGTTGCAAAGAGAATGAAAAGAAGGGAACAAGAGACGAAATCAACGAGAAAGAAGACTGCAAAAAGGACGAGAAGGGCAATTCTAATAGAGTGGAGAAGGGAATAGAAGTAATGGAAGATAAAGAAAGTTACAAAAAGGACGAGAATAATGAGATCCATAACGCTAAAATGGAAGAATCTGTGGGAAAAGCAAAAGGAAACGAAGAAATTCGAGATGATCAAAGCCATAAAAGGATCATAAATAATGAAGAGAAATCAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGGTGATGGATAATGAAAGTGAAAAGGGAAACAAAGGAAGCAAAGAGAATGCTGAGGATGAGATATTGGAATTGTTTGAGAGTGCTTGGCTTATGAAACCAACAATAAAGGGGAAAGGAAACGTGATGCAACGTTCATCTTCACTTTTCTGA

Coding sequence (CDS)

ATGAGTTCTAGACGACGGCCGTTGCAAACCTGTGGAGTTTCATTTCTTGCTGTAGCCCACAGCACCTGCTCAAGAGCTCAGAATCTTGATGGACGGTTGGGTTCAATAACAAGAAAAATGGTTTGGATTGCCAAGCTTATGAACCCTTTGATTTTTCTCCTGAAATATCAGAGCTTGTTGGTCCTCTGCTTTATTGATGATCGTTTACTAGCAATCGCAAACACTCTAGAGAAGATCTTTCCTCCATCCAAACTCGTTTTCGATAAGATTGACGTTCTTCTTCATCTGATTGAAACTTTTCCATCAAAATTTGACGATGCTGTTGACAAGATTCCCTGTTTCAACCAAGAAGTTCTGTTACTAGATTGGACAGTGACCCACGTCATATCTTTACTCAATTTCATGATAACCATACTAATGAACTGGGGGAGAGATGTAGCAAGAGAGAAGGAAATTTTGGTTGATATGAACTACAAAGAGAGTTGTAATGGATCTAAATCAATTGATAAATCTAAATGTTGCTCAGAAGGAATTGTTTCATCTCTTTCTGAGATACAACGAACTTCCATGAATGAGAAAATGAAATCCAACCCCATGAAGGGAAGTTATGCAGAAATTTTGAAAATGGGAACAAAAGGGGTACTGAAAGATGATGAAGGTTGCAAAGAGAATGAAAAGAAGGGAACAAGAGACGAAATCAACGAGAAAGAAGACTGCAAAAAGGACGAGAAGGGCAATTCTAATAGAGTGGAGAAGGGAATAGAAGTAATGGAAGATAAAGAAAGTTACAAAAAGGACGAGAATAATGAGATCCATAACGCTAAAATGGAAGAATCTGTGGGAAAAGCAAAAGGAAACGAAGAAATTCGAGATGATCAAAGCCATAAAAGGATCATAAATAATGAAGAGAAATCAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGGGTGATGGATAATGAAAGTGAAAAGGGAAACAAAGGAAGCAAAGAGAATGCTGAGGATGAGATATTGGAATTGTTTGAGAGTGCTTGGCTTATGAAACCAACAATAAAGGGGAAAGGAAACGTGATGCAACGTTCATCTTCACTTTTCTGA

Protein sequence

MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLLVLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLLLDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVSSLSEIQRTSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEKKGTRDEINEKEDCKKDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDDQSHKRIINNEEKSKEEEEEEEEEEEEGVMDNESEKGNKGSKENAEDEILELFESAWLMKPTIKGKGNVMQRSSSLF*

Homology

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BLAST of CsaV3_2G025390 vs. NCBI nr
Match: XP_031736455.1 (gelsolin-related protein of 125 kDa [Cucumis sativus] >KAE8652048.1 hypothetical protein Csa_018704 [Cucumis sativus])

HSP 1 Score: 691.0 bits (1782), Expect = 5.5e-195
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0


Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60
           MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL
Sbjct: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60

Query: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120
           VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL
Sbjct: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120

Query: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180
           LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS
Sbjct: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180

Query: 181 SLSEIQRTSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEKKGTRDEINEKEDCK 240
           SLSEIQRTSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEKKGTRDEINEKEDCK
Sbjct: 181 SLSEIQRTSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEKKGTRDEINEKEDCK 240

Query: 241 KDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDDQSHKRIIN 300
           KDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDDQSHKRIIN
Sbjct: 241 KDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDDQSHKRIIN 300

Query: 301 NEEKSKEEEEEEEEEEEEGVMDNESEKGNKGSKENAEDEILELFESAWLMKPTIKGKGNV 360
           NEEKSKEEEEEEEEEEEEGVMDNESEKGNKGSKENAEDEILELFESAWLMKPTIKGKGNV
Sbjct: 301 NEEKSKEEEEEEEEEEEEGVMDNESEKGNKGSKENAEDEILELFESAWLMKPTIKGKGNV 360

Query: 361 MQRSSSLF 369
           MQRSSSLF
Sbjct: 361 MQRSSSLF 368

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BLAST of CsaV3_2G025390 vs. NCBI nr
Match: XP_008444439.1 (PREDICTED: uncharacterized protein LOC103487764 [Cucumis melo] >XP_008444440.1 PREDICTED: uncharacterized protein LOC103487764 [Cucumis melo])

HSP 1 Score: 576.6 bits (1485), Expect = 1.5e-160
Identity = 314/368 (85.33%), Postives = 327/368 (88.86%), Query Frame = 0


Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60
           MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL
Sbjct: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60

Query: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120
            L FIDDRLLAIAN LEKIFPP KL+FDKID LLHLIETFPSKFDDAVD+IPCFNQ VLL
Sbjct: 61  ALSFIDDRLLAIANILEKIFPPFKLIFDKIDDLLHLIETFPSKFDDAVDEIPCFNQ-VLL 120

Query: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180
           LDWTVTH ISLL  MITILMNWGRDVAREKEILVDMNYKES NGS+S DKS CCSEGIVS
Sbjct: 121 LDWTVTHAISLLKSMITILMNWGRDVAREKEILVDMNYKESRNGSESTDKSGCCSEGIVS 180

Query: 181 SLSEIQRTSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEKKGTRDEINEKEDCK 240
           S+SE QR SM+ KMKSNPMKGSY EILKMG  GVLKDDE  KENEKKGTRD+IN+KEDCK
Sbjct: 181 SISETQRASMDVKMKSNPMKGSYKEILKMGINGVLKDDEDYKENEKKGTRDKINDKEDCK 240

Query: 241 KDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDDQSHKRIIN 300
            DE GNS  VEKGIE+MEDKES+KKDENNEIH A +EESV KAKGNEEIRDDQSHKRIIN
Sbjct: 241 NDENGNSKEVEKGIEMMEDKESHKKDENNEIHKANLEESVDKAKGNEEIRDDQSHKRIIN 300

Query: 301 NEEKSKEEEEEEEEEEEEGVMDNESEKGNKGSKENAEDEILELFESAWLMKPTIKGKGNV 360
           NEEKSK         EEEGVMDNESEKGN GS++N ED ILELFESAWLMKPTIKGKG+ 
Sbjct: 301 NEEKSK---------EEEGVMDNESEKGNNGSRKNGEDGILELFESAWLMKPTIKGKGDS 358

Query: 361 MQRSSSLF 369
           MQRSSS F
Sbjct: 361 MQRSSSFF 358

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BLAST of CsaV3_2G025390 vs. NCBI nr
Match: KAA0061016.1 (gelsolin-related protein of 125 kDa isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 572.4 bits (1474), Expect = 2.8e-159
Identity = 312/368 (84.78%), Postives = 325/368 (88.32%), Query Frame = 0


Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60
           MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL
Sbjct: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60

Query: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120
            L FIDDRLLAI N LEK+FPP KL+FDKID LLHLIETFPSKFDDAVD+IPCFNQ VLL
Sbjct: 61  ALSFIDDRLLAITNILEKVFPPFKLIFDKIDDLLHLIETFPSKFDDAVDEIPCFNQ-VLL 120

Query: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180
           LDWTVTH ISLL  MITILMNWGRDVAREKEILVDMNYKES NGS+S DKS CCSEGIVS
Sbjct: 121 LDWTVTHAISLLKSMITILMNWGRDVAREKEILVDMNYKESRNGSESTDKSGCCSEGIVS 180

Query: 181 SLSEIQRTSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEKKGTRDEINEKEDCK 240
           S+SE QR SM+ KMKSNPMKGSY EILKMG  GVLKDDE  KENEKKGTRDEIN+KEDCK
Sbjct: 181 SISETQRASMDVKMKSNPMKGSYKEILKMGINGVLKDDEDYKENEKKGTRDEINDKEDCK 240

Query: 241 KDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDDQSHKRIIN 300
            DE GNS  VEKGIE+MEDKES+KKDENNEIH A +EESV KAKGNEEIRDDQSHKRIIN
Sbjct: 241 NDENGNSKEVEKGIEMMEDKESHKKDENNEIHKANLEESVDKAKGNEEIRDDQSHKRIIN 300

Query: 301 NEEKSKEEEEEEEEEEEEGVMDNESEKGNKGSKENAEDEILELFESAWLMKPTIKGKGNV 360
           NEEKSK         EEEGVMD ESEKGN GS++N ED ILELFESAWLMKPTIKGKG+ 
Sbjct: 301 NEEKSK---------EEEGVMDYESEKGNNGSRKNDEDGILELFESAWLMKPTIKGKGDS 358

Query: 361 MQRSSSLF 369
           MQRSSS F
Sbjct: 361 MQRSSSFF 358

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BLAST of CsaV3_2G025390 vs. NCBI nr
Match: XP_038884034.1 (myelin transcription factor 1 [Benincasa hispida] >XP_038884035.1 myelin transcription factor 1 [Benincasa hispida])

HSP 1 Score: 450.7 bits (1158), Expect = 1.2e-122
Identity = 270/374 (72.19%), Postives = 300/374 (80.21%), Query Frame = 0


Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60
           MSSRRRPLQTC VSFLAVAHSTCSRAQNLDGRLGSITRKMV IAKLM PLIF+L+YQ LL
Sbjct: 1   MSSRRRPLQTCVVSFLAVAHSTCSRAQNLDGRLGSITRKMVRIAKLMKPLIFVLQYQCLL 60

Query: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120
           VL FIDDRLLAIAN LEKIFPP KLVFDKID LLHLIETFPSKFDDAVD+IPCFNQ VLL
Sbjct: 61  VLSFIDDRLLAIANILEKIFPPFKLVFDKIDHLLHLIETFPSKFDDAVDEIPCFNQ-VLL 120

Query: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180
           LDWTVTH ISLL FMITILMNWGRD  REKEILVDMNYKE    S+S DKS+CCSEGIVS
Sbjct: 121 LDWTVTHAISLLKFMITILMNWGRDGTREKEILVDMNYKEG-RKSESTDKSECCSEGIVS 180

Query: 181 SLSEIQR--TSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEK------KGTRDE 240
           S+SE Q+   +M+EKMKSN +KG+  E+LKM        DE  KENEK      KGTR+E
Sbjct: 181 SVSETQQAEAAMDEKMKSNSVKGTCKEVLKM--------DEDSKENEKSTNGVEKGTRNE 240

Query: 241 INEKEDCKKDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDD 300
           +++KEDCK +EKGNS  VEKGIEV+ED ES KKDENNE    +MEESV K +GNEEI D+
Sbjct: 241 MDDKEDCKNNEKGNSKEVEKGIEVVEDNESCKKDENNENKMIRMEESVEKTEGNEEIPDE 300

Query: 301 QSHKRIINNEEKSKEEEEEEEEEEEEGVMDNESEKGNKGSKENAEDEILELFESAWLMKP 360
                   N    +E+EEEEEEEEEEG+MD ESEKG+ GS      EILELFE+AWLMKP
Sbjct: 301 -------GNSRVKEEKEEEEEEEEEEGLMDYESEKGSNGSM-----EILELFETAWLMKP 352

Query: 361 TIKGKGNVMQRSSS 367
           TI+G+GN+M RS+S
Sbjct: 361 TIRGQGNMMPRSAS 352

[Close]

BLAST of CsaV3_2G025390 vs. NCBI nr
Match: XP_022131349.1 (uncharacterized protein LOC111004599 [Momordica charantia])

HSP 1 Score: 310.5 bits (794), Expect = 2.0e-80
Identity = 211/375 (56.27%), Postives = 246/375 (65.60%), Query Frame = 0


Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60
           MSSRR PLQTCGVSF+A+AHS  SRAQ LDGRLGS TRKM+ +A +MNPLIF L YQ +L
Sbjct: 1   MSSRRCPLQTCGVSFVAIAHSAISRAQVLDGRLGSTTRKMIRLANIMNPLIFALHYQFVL 60

Query: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120
           VL FIDD  LA AN +E IFPPSKLVFDKID LL LIET P KFDDAVDK+PCFNQ V L
Sbjct: 61  VLTFIDDGFLATANIVEXIFPPSKLVFDKIDDLLLLIETLPVKFDDAVDKLPCFNQ-VPL 120

Query: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180
           LDW V H ISLL FMI ILMNW +D  REKEILVDMN  E  N S+S D           
Sbjct: 121 LDWAVIHAISLLKFMIAILMNWVKDGIREKEILVDMNCNEGRNASESAD----------- 180

Query: 181 SLSEIQRTSMNEKMKSNPMKG-SYAEILKMGTKGVLKDDEGCKENEK--------KGTRD 240
                    M+EKMKS+  K  SY E+ K G    ++ DE CKENEK        +G ++
Sbjct: 181 ---------MDEKMKSDTTKNTSYKEVQKKG----VEYDEDCKENEKGTYKKAMEEGRKE 240

Query: 241 EINEKEDCKKDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRD 300
            + +K DCK DEK    +VEKGI     KES           +KME SVGKA+GN EI D
Sbjct: 241 AVGDKADCKNDEK----KVEKGI-----KES-----------SKMEASVGKAEGNGEIAD 300

Query: 301 DQSHKRIINNEEKSKEEEEEEEEEEEEGVMDNESEKGNKGSKENAEDEILELFESAWLMK 360
                   +N+EKS+ E+E+EEEE     MD   E+G KG  E  +D+ILELFE+AWLMK
Sbjct: 301 H-------SNKEKSEGEDEKEEEE----AMDYGKEEGKKGRMEK-KDDILELFETAWLMK 318

Query: 361 PTIKGKGNVMQRSSS 367
           PT KGKGN++ RS+S
Sbjct: 361 PTGKGKGNLLPRSAS 318

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BLAST of CsaV3_2G025390 vs. ExPASy TrEMBL
Match: A0A0A0LMZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351010 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 1.0e-175
Identity = 368/526 (69.96%), Postives = 368/526 (69.96%), Query Frame = 0


Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60
           MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL
Sbjct: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60

Query: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120
           VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL
Sbjct: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120

Query: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180
           LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS
Sbjct: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180

Query: 181 SLSEIQRTSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEKKGTRDEINEKEDCK 240
           SLSEIQRTSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEKKGTRDEINEKEDCK
Sbjct: 181 SLSEIQRTSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEKKGTRDEINEKEDCK 240

Query: 241 KDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDDQSHKRIIN 300
           KDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDDQSHKRIIN
Sbjct: 241 KDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDDQSHKRIIN 300

Query: 301 NEEKSK------------------------------------------------------ 360
           NEEKSK                                                      
Sbjct: 301 NEEKSKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 360

Query: 361 ------------------------------------------------------------ 369
                                                                       
Sbjct: 361 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 420

[Close]

BLAST of CsaV3_2G025390 vs. ExPASy TrEMBL
Match: A0A1S3BAB2 (uncharacterized protein LOC103487764 OS=Cucumis melo OX=3656 GN=LOC103487764 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 7.3e-161
Identity = 314/368 (85.33%), Postives = 327/368 (88.86%), Query Frame = 0


Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60
           MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL
Sbjct: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60

Query: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120
            L FIDDRLLAIAN LEKIFPP KL+FDKID LLHLIETFPSKFDDAVD+IPCFNQ VLL
Sbjct: 61  ALSFIDDRLLAIANILEKIFPPFKLIFDKIDDLLHLIETFPSKFDDAVDEIPCFNQ-VLL 120

Query: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180
           LDWTVTH ISLL  MITILMNWGRDVAREKEILVDMNYKES NGS+S DKS CCSEGIVS
Sbjct: 121 LDWTVTHAISLLKSMITILMNWGRDVAREKEILVDMNYKESRNGSESTDKSGCCSEGIVS 180

Query: 181 SLSEIQRTSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEKKGTRDEINEKEDCK 240
           S+SE QR SM+ KMKSNPMKGSY EILKMG  GVLKDDE  KENEKKGTRD+IN+KEDCK
Sbjct: 181 SISETQRASMDVKMKSNPMKGSYKEILKMGINGVLKDDEDYKENEKKGTRDKINDKEDCK 240

Query: 241 KDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDDQSHKRIIN 300
            DE GNS  VEKGIE+MEDKES+KKDENNEIH A +EESV KAKGNEEIRDDQSHKRIIN
Sbjct: 241 NDENGNSKEVEKGIEMMEDKESHKKDENNEIHKANLEESVDKAKGNEEIRDDQSHKRIIN 300

Query: 301 NEEKSKEEEEEEEEEEEEGVMDNESEKGNKGSKENAEDEILELFESAWLMKPTIKGKGNV 360
           NEEKSK         EEEGVMDNESEKGN GS++N ED ILELFESAWLMKPTIKGKG+ 
Sbjct: 301 NEEKSK---------EEEGVMDNESEKGNNGSRKNGEDGILELFESAWLMKPTIKGKGDS 358

Query: 361 MQRSSSLF 369
           MQRSSS F
Sbjct: 361 MQRSSSFF 358

[Close]

BLAST of CsaV3_2G025390 vs. ExPASy TrEMBL
Match: A0A5A7V3D3 (Gelsolin-related protein of 125 kDa isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001510 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.4e-159
Identity = 312/368 (84.78%), Postives = 325/368 (88.32%), Query Frame = 0


Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60
           MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL
Sbjct: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60

Query: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120
            L FIDDRLLAI N LEK+FPP KL+FDKID LLHLIETFPSKFDDAVD+IPCFNQ VLL
Sbjct: 61  ALSFIDDRLLAITNILEKVFPPFKLIFDKIDDLLHLIETFPSKFDDAVDEIPCFNQ-VLL 120

Query: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180
           LDWTVTH ISLL  MITILMNWGRDVAREKEILVDMNYKES NGS+S DKS CCSEGIVS
Sbjct: 121 LDWTVTHAISLLKSMITILMNWGRDVAREKEILVDMNYKESRNGSESTDKSGCCSEGIVS 180

Query: 181 SLSEIQRTSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEKKGTRDEINEKEDCK 240
           S+SE QR SM+ KMKSNPMKGSY EILKMG  GVLKDDE  KENEKKGTRDEIN+KEDCK
Sbjct: 181 SISETQRASMDVKMKSNPMKGSYKEILKMGINGVLKDDEDYKENEKKGTRDEINDKEDCK 240

Query: 241 KDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDDQSHKRIIN 300
            DE GNS  VEKGIE+MEDKES+KKDENNEIH A +EESV KAKGNEEIRDDQSHKRIIN
Sbjct: 241 NDENGNSKEVEKGIEMMEDKESHKKDENNEIHKANLEESVDKAKGNEEIRDDQSHKRIIN 300

Query: 301 NEEKSKEEEEEEEEEEEEGVMDNESEKGNKGSKENAEDEILELFESAWLMKPTIKGKGNV 360
           NEEKSK         EEEGVMD ESEKGN GS++N ED ILELFESAWLMKPTIKGKG+ 
Sbjct: 301 NEEKSK---------EEEGVMDYESEKGNNGSRKNDEDGILELFESAWLMKPTIKGKGDS 358

Query: 361 MQRSSSLF 369
           MQRSSS F
Sbjct: 361 MQRSSSFF 358

[Close]

BLAST of CsaV3_2G025390 vs. ExPASy TrEMBL
Match: A0A6J1BQ09 (uncharacterized protein LOC111004599 OS=Momordica charantia OX=3673 GN=LOC111004599 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 9.7e-81
Identity = 211/375 (56.27%), Postives = 246/375 (65.60%), Query Frame = 0


Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60
           MSSRR PLQTCGVSF+A+AHS  SRAQ LDGRLGS TRKM+ +A +MNPLIF L YQ +L
Sbjct: 1   MSSRRCPLQTCGVSFVAIAHSAISRAQVLDGRLGSTTRKMIRLANIMNPLIFALHYQFVL 60

Query: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120
           VL FIDD  LA AN +E IFPPSKLVFDKID LL LIET P KFDDAVDK+PCFNQ V L
Sbjct: 61  VLTFIDDGFLATANIVEXIFPPSKLVFDKIDDLLLLIETLPVKFDDAVDKLPCFNQ-VPL 120

Query: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180
           LDW V H ISLL FMI ILMNW +D  REKEILVDMN  E  N S+S D           
Sbjct: 121 LDWAVIHAISLLKFMIAILMNWVKDGIREKEILVDMNCNEGRNASESAD----------- 180

Query: 181 SLSEIQRTSMNEKMKSNPMKG-SYAEILKMGTKGVLKDDEGCKENEK--------KGTRD 240
                    M+EKMKS+  K  SY E+ K G    ++ DE CKENEK        +G ++
Sbjct: 181 ---------MDEKMKSDTTKNTSYKEVQKKG----VEYDEDCKENEKGTYKKAMEEGRKE 240

Query: 241 EINEKEDCKKDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRD 300
            + +K DCK DEK    +VEKGI     KES           +KME SVGKA+GN EI D
Sbjct: 241 AVGDKADCKNDEK----KVEKGI-----KES-----------SKMEASVGKAEGNGEIAD 300

Query: 301 DQSHKRIINNEEKSKEEEEEEEEEEEEGVMDNESEKGNKGSKENAEDEILELFESAWLMK 360
                   +N+EKS+ E+E+EEEE     MD   E+G KG  E  +D+ILELFE+AWLMK
Sbjct: 301 H-------SNKEKSEGEDEKEEEE----AMDYGKEEGKKGRMEK-KDDILELFETAWLMK 318

Query: 361 PTIKGKGNVMQRSSS 367
           PT KGKGN++ RS+S
Sbjct: 361 PTGKGKGNLLPRSAS 318

[Close]

BLAST of CsaV3_2G025390 vs. ExPASy TrEMBL
Match: A0A6J1KSS3 (uncharacterized protein LOC111496109 OS=Cucurbita maxima OX=3661 GN=LOC111496109 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-71
Identity = 195/366 (53.28%), Postives = 241/366 (65.85%), Query Frame = 0


Query: 1   MSSRRRPLQTCGVSFLAVAHSTCSRAQNLDGRLGSITRKMVWIAKLMNPLIFLLKYQSLL 60
           MSS RRPL TC VSFLA+AH   SRAQNLDG LGS TRKMV I KL+ PLI +L+YQ  L
Sbjct: 12  MSSPRRPLHTCSVSFLAIAHGIFSRAQNLDGWLGSTTRKMVQITKLVKPLILVLQYQWSL 71

Query: 61  VLCFIDDRLLAIANTLEKIFPPSKLVFDKIDVLLHLIETFPSKFDDAVDKIPCFNQEVLL 120
            L FIDDRLLAI+N +E++FPPS+LVFDKID +LH++ETFP KF DAVDK+PCFNQ VL 
Sbjct: 72  FLSFIDDRLLAISNFVEQVFPPSRLVFDKIDDVLHMVETFPGKFADAVDKLPCFNQ-VLF 131

Query: 121 LDWTVTHVISLLNFMITILMNWGRDVAREKEILVDMNYKESCNGSKSIDKSKCCSEGIVS 180
           L+W VTH I+LL +MITILMN GRD  REKEILVDMNY +S NGS+S  K    SEG +S
Sbjct: 132 LEWAVTHAITLLEYMITILMNLGRDGTREKEILVDMNYNKSRNGSESAVK----SEGTLS 191

Query: 181 SLSEIQRTSMNEKMKSNPMKGSYAEILKMGTKGVLKDDEGCKENEKKGTRDEINEKEDCK 240
            + E Q+ +MN         GS  E++KMG +G        KE++ KGT +   E     
Sbjct: 192 CVCETQQGAMN---------GSSKEVVKMGREG--------KEDDCKGTYNRAME----G 251

Query: 241 KDEKGNSNRVEKGIEVMEDKESYKKDENNEIHNAKMEESVGKAKGNEEIRDDQSHKRIIN 300
           K+E GN           ++K S KK E +E   AKME    KA+GNE +           
Sbjct: 252 KEEFGN-----------KEKGSTKKVEGSESGKAKME----KAEGNEGM----------- 311

Query: 301 NEEKSKEEEEEEEEEEEEGVMDNESEKGNKGSKENAEDEILELFESAWLMKPTIKGKGNV 360
              KSK+EE ++ E+EEE       E+G+ GS +  ED+ILELFE++WLMKPT K KGN+
Sbjct: 312 ---KSKKEEVKDCEDEEE-------EEGSHGSIQK-EDDILELFETSWLMKPTGKPKGNL 314

Query: 361 MQRSSS 367
           M RS+S
Sbjct: 372 MTRSAS 314

The following BLAST results are available for this feature:

BLAST of CsaV3_2G025390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736455.1	5.5e-195	100.00	gelsolin-related protein of 125 kDa [Cucumis sativus] >KAE8652048.1 hypothetical...	[more]
XP_008444439.1	1.5e-160	85.33	PREDICTED: uncharacterized protein LOC103487764 [Cucumis melo] >XP_008444440.1 P...	[more]
KAA0061016.1	2.8e-159	84.78	gelsolin-related protein of 125 kDa isoform X1 [Cucumis melo var. makuwa]	[more]
XP_038884034.1	1.2e-122	72.19	myelin transcription factor 1 [Benincasa hispida] >XP_038884035.1 myelin transcr...	[more]
XP_022131349.1	2.0e-80	56.27	uncharacterized protein LOC111004599 [Momordica charantia]	[more]

BLAST of CsaV3_2G025390 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G025390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMZ2	1.0e-175	69.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351010 PE=4 SV=1	[more]
A0A1S3BAB2	7.3e-161	85.33	uncharacterized protein LOC103487764 OS=Cucumis melo OX=3656 GN=LOC103487764 PE=...	[more]
A0A5A7V3D3	1.4e-159	84.78	Gelsolin-related protein of 125 kDa isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1BQ09	9.7e-81	56.27	uncharacterized protein LOC111004599 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A6J1KSS3	1.1e-71	53.28	uncharacterized protein LOC111496109 OS=Cucurbita maxima OX=3661 GN=LOC111496109...	[more]

BLAST of CsaV3_2G025390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 295..327
None	No IPR available	COILS	Coil	Coil	coord: 257..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..322
None	No IPR available	PANTHER	PTHR37710	TRANSMEMBRANE PROTEIN	coord: 247..362 coord: 1..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G025390.1	CsaV3_2G025390.1	mRNA