CsaV3_2G012880 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAACTCCCGACGCTTATCAGGCAGCGTTGTCAGGAGTTATGGTGTTATGTATGCCGTCGGGAGTTCTGATCTCCCCGCTCCATCTTTGGCTAGTTGAGAGTTTTGAAAATTTCTGACGAGTTATCATACGTGTTGGGAATGCCTATCTCAACGAGGTTTTTTCAATCACTTTTTCGACGACTAGAAAGGCGTCGAAAATTCCATTCTCGAAGTATTTTGGTACATTTCTCGATGACTTTGACTGTCATAAGAGGGTCATTTTGTTTGTAGTGCATGATAGATTGTGACTCTTTACTATATTTGTAAATACTTTTAGTAGTCTATTTAAATAATTTTCCCTTTTCCTCCCTTTTCTAAATTCAAAAAGCAATGTTTTGCCTCATATTTTTATTGTTAATAAATATTTTTGATTTCTACACTTTCATGAAAGTAGCAATTTAGTCTCTAAATTTTACTTTGTAACAACTTTGTTCTTGTACCATTCAATCTTATGACAATTTAACACATGAATAATTTTAGTACTTTATTGTGTCACAAGTCTTGGTACTTTTAGATTTGTAATAAGTACTTACTCCTTACCTCTTAACGTAAGAAATCATCAAAGTTAGATGTCAAATTTTATTTTTTCTTCTATAAAAATTTTATTTTAAAAAAATATTGAGTTGTCTCTAATTAGTTTAACAGTTTATTTATGAAAAAAAAAACTCATTAAAATTCAACGATGGTTTTTAAAATTGGAATAAAGTCATTACATAAGTCCAACTAAACGGTTACATAGTAAAATCTAGGAACAAAATTCTTACAAAATCGAAAGTATATAAACTAAACTGTTACACATAATTTTTATTTAAATTACTAGACGAAAAGTTATTGTTAACCTATTTTTATTCGGTCTAAAAACCTAATATTGTTACCTAAGGTCAGTAATACAGTTAAACCAAATAGACTACACATCATTTTCATGTCAATAAAAAGTATGTCATAGGATATCAAATTTGATTCATATGGATACATATGCTCGATTCCCCTATTTCACATATTGTAAAAAATATAGGTATTGACATGGGGTTTACGAGGTAAAATTGGTCAATGACCTAAAACAATACAATAACTACCTAAATACTAACAACACTTACCAAGAAGGTGTAAAATGATTGGTACGACCTATTTGGGAGTGATCTTAAGATGACAAAAGTGATTTGGATTATTTTCGAACTAATTGAAAAAAATGCTTTTATTCCTTCAAAATCAATTTAGTATTAACAAAAACCTGTTTAAAGGTGTAAAACTAGTCAACAAATTAATTACAAGTGATGGAAGATGTATTTTAGAGTAATTTAAAAAATGATAAAAATGGACTAACCATTTCAAAATCACTATCAAACATGCATGGCTATACATCTTCTCATCTTCTTACTTCCAACAAACTAATTAACCATGCATTATAACACACATATTGAGAAAAATTAGACCGTACAAATAGAGGAACTAATATATCTCGTCATTGAGGTATATATACAATCAAATATATATAAGAGTACAACTCGACACCACTTCAAAATAAGAACTTACATAAACACTAAAGTATGCTAAACAAAATATCGTATCTAAGTGTGAGAATTCATATATAGTTTCATGAGCACCGGTAGAATTGAATCGGTTGTACGTACTTGCTCCATGTTTTTACATCGGCAAACATAAGAGAGAGAAAAAGAAAGTTGAAAATTGAAATGAAGTCGAAACCCTAATGTGAACTAAACAAAGAAAAAAAGAGTGGGTAAAAGAAGAAAACAAAGCATATGGGAACCAAAATGAGAGACCAAGAGCAAGTTGCATTGTGATGTTAGAAAGTTAAATACTGAAAACATAGCCCCAGAAAGTTCCATGCACTTTTTTGCAATTAGAAAGTGAGAATCAAAAGACTTTTCAAATCAAGAGCCTTCTAGAAAATTCCACTTCAACACAACACACTAATACAATACCTTTTCCTTTCTGTTTCACTTCCATTGGTTAATTAGTGTTGCCTTTGTTAAACCCACACCAAAATTCTCTTACTCCCTGTTACTTTACAACTTTTTTTTCTTCTTTTTATAATAGTTACATAGAATTTTTCTTTTGAAGAAGTTACATAAAATTATTTAATTATGAAAAAAATATTATTTGTTTTCTTATTATTCTTCAAATTACTTTTAAAATATGACATTAATTTCGATTATAATACACAGAAGAAAAAAATAAGTATATAAGAACAGTTAACCATAAACCAACCCATTAAAATAATTTCACGTATGTTATTAATTTTAGAAAATGATTGTATGTAAATATTTTTTCAAAAGAAAAGAAAAGTTTTCTTAAATTCAACAATCAAATTCTAAACGTTTTTGGGCTCATTAGGTGGTGTAATACTTTTCTGTCAGAAAAAGTTAAAGAGATGAGAGAAAAGAAAAATAAGGTCATTTCACCAAAGCATTACATCAACACTTGATTTTTAAAAATTATTAACTACAAGAACAATATAATAATATGTCAACGAATCTCAATTTACATTAATTCTAATTTTAAGTCACTCTAAATCATTCTTTGTTTCAATCTCTATCCAACATCCAATGAATCTCTAGTTAAATAAAGAGTCTTCAAACATAATATTACATCCTTTAGAGTGTAAAATTTTAGACTATTTTTTTTTTAAAGAAAATAAAAAGTAAAATTTAGTGGTTTTTTAAGGGGACTGAAACAAAGAAAGTTAGAGAAAAATAATGGACAAAAAAGACAGTAATCAGGAAATAGTTGAATAATAATAATAATAGTAATAATTCCAGTAATGATTTAGACTTTGTTTCAACACTTGAATTTTATTGGAAACCTTTTAAATCAATTTTAAATAAAGTCTAAAGAAACAATCTATATATTTTTTAAAATTAAAAACAGACAAAGAAACAGAACCGAATCTTACTTCTAAATAATAATAATAACAATAATAATATTAAAAAAAAAACACAACAATTCAAAACAAAAACAAAAAACCAAAACCAAAAACAAAAACCCCTTCAATTAACCAAATTAAGATGCCAAGTTTCTGGTCCCCCTACCTCTATAATTTATAAAAAGAATCTTAAACTTCCATTGAAAAAGAATGAACATAGAATCTTAGTGAAAAAGAAAGAAAGAAGGAAGTAGCAAATCGTTGGCCTTTAATTCATTACAAAAAATAAAAAATTCCATTAAATAACCCAATTGAAATTAAAGCTGAAATAGATGTTTTTTTTTCTTCTTCTCAAAGCCACCACCTTGACCAATCCAGATACATTGGAGACAGACCAAGATCTTTAATTTAATTTAATTTATTTTTTTTTATTATTATTTTGCCTTGAAGAAGCTTCTAAATCTACAAAAAGAAAAATTATAACTCACGTGTTAACATCAAATAATTTAAGTGTATTTTTTAAGCCGTAGGTTAGATTTTCCTTTTGGCTGCTTTTAGTCGTCAAGAACTCATATAAAAGGAGGATGATGATTTTTATACATCACCATGCAAAATGGACGAGGAAGGGAAGTCTAGCAATGATCAAGGTGGTGAGGTTCGATACCGTGGTGTACGGCGTCGACCTTGGGGAAAATTTGCAGCAGAGATTCGTGATTCATCGAGACATGGTGCTCGAATTTGGCTTGGAACGTTCAACACGGCGGAGGAGGCAGCTCGAGCTTATGACCGAGCTGCATATATGATGCGTGGTCATTTGGCTGTCCTGAATTTCCCTAATGAATATCCTTCTCTTGGTGGGAGTTCTTCAGCTTCTAGTTCTTCCTCATCTGCTGCAGCTCCAAGGGTTCGAGGGCAAGTGATTGAATTGGAATGTCTTGATGATAAGGTGCTTGAGGAGCTACTTGGGTATGAGGAGGAAAGGACGAAGAAGTGA ATGGTGAACTCCCGACGCTTATCAGGCAGCGTTGTCAGGAGTTATGGTGTTATGTATGCCGTCGGGAGTTCTGATCTCCCCGCTCCATCTTTGGCTAGGAAGTCTAGCAATGATCAAGGTGGTGAGGTTCGATACCGTGGTGTACGGCGTCGACCTTGGGGAAAATTTGCAGCAGAGATTCGTGATTCATCGAGACATGGTGCTCGAATTTGGCTTGGAACGTTCAACACGGCGGAGGAGGCAGCTCGAGCTTATGACCGAGCTGCATATATGATGCGTGGTCATTTGGCTGTCCTGAATTTCCCTAATGAATATCCTTCTCTTGGTGGGAGTTCTTCAGCTTCTAGTTCTTCCTCATCTGCTGCAGCTCCAAGGGTTCGAGGGCAAGTGATTGAATTGGAATGTCTTGATGATAAGGTGCTTGAGGAGCTACTTGGGTATGAGGAGGAAAGGACGAAGAAGTGA ATGGTGAACTCCCGACGCTTATCAGGCAGCGTTGTCAGGAGTTATGGTGTTATGTATGCCGTCGGGAGTTCTGATCTCCCCGCTCCATCTTTGGCTAGGAAGTCTAGCAATGATCAAGGTGGTGAGGTTCGATACCGTGGTGTACGGCGTCGACCTTGGGGAAAATTTGCAGCAGAGATTCGTGATTCATCGAGACATGGTGCTCGAATTTGGCTTGGAACGTTCAACACGGCGGAGGAGGCAGCTCGAGCTTATGACCGAGCTGCATATATGATGCGTGGTCATTTGGCTGTCCTGAATTTCCCTAATGAATATCCTTCTCTTGGTGGGAGTTCTTCAGCTTCTAGTTCTTCCTCATCTGCTGCAGCTCCAAGGGTTCGAGGGCAAGTGATTGAATTGGAATGTCTTGATGATAAGGTGCTTGAGGAGCTACTTGGGTATGAGGAGGAAAGGACGAAGAAGTGA MVNSRRLSGSVVRSYGVMYAVGSSDLPAPSLARKSSNDQGGEVRYRGVRRRPWGKFAAEIRDSSRHGARIWLGTFNTAEEAARAYDRAAYMMRGHLAVLNFPNEYPSLGGSSSASSSSSSAAAPRVRGQVIELECLDDKVLEELLGYEEERTKK* Homology
BLAST of CsaV3_2G012880 vs. NCBI nr
Match: KAE8651817.1 (hypothetical protein Csa_006294 [Cucumis sativus]) HSP 1 Score: 300.1 bits (767), Expect = 1.1e-77 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. NCBI nr
Match: XP_004145711.1 (ethylene-responsive transcription factor ERF098 [Cucumis sativus]) HSP 1 Score: 239.2 bits (609), Expect = 2.4e-59 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. NCBI nr
Match: XP_008460635.1 (PREDICTED: ethylene-responsive transcription factor ERF098 [Cucumis melo] >KAA0065676.1 ethylene-responsive transcription factor ERF098 [Cucumis melo var. makuwa] >TYK08226.1 ethylene-responsive transcription factor ERF098 [Cucumis melo var. makuwa]) HSP 1 Score: 224.9 bits (572), Expect = 4.7e-55 Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. NCBI nr
Match: XP_038876105.1 (ethylene-responsive transcription factor ERF098-like [Benincasa hispida]) HSP 1 Score: 201.1 bits (510), Expect = 7.2e-48 Identity = 104/120 (86.67%), Postives = 107/120 (89.17%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. NCBI nr
Match: XP_023006327.1 (ethylene-responsive transcription factor ERF098-like [Cucurbita maxima]) HSP 1 Score: 196.8 bits (499), Expect = 1.4e-46 Identity = 103/124 (83.06%), Postives = 112/124 (90.32%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. ExPASy Swiss-Prot
Match: Q9LTC5 (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 GN=ERF098 PE=1 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 2.3e-33 Identity = 81/135 (60.00%), Postives = 96/135 (71.11%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. ExPASy Swiss-Prot
Match: P93822 (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=ERF14 PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 5.7e-32 Identity = 75/123 (60.98%), Postives = 91/123 (73.98%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. ExPASy Swiss-Prot
Match: Q9LSX0 (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 GN=ERF096 PE=1 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 9.8e-32 Identity = 78/126 (61.90%), Postives = 89/126 (70.63%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. ExPASy Swiss-Prot
Match: Q9LTC6 (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 GN=ERF095 PE=1 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.8e-30 Identity = 72/117 (61.54%), Postives = 87/117 (74.36%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22 Identity = 49/61 (80.33%), Postives = 56/61 (91.80%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. ExPASy TrEMBL
Match: A0A0A0LI84 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G177220 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. ExPASy TrEMBL
Match: A0A5A7VH52 (Ethylene-responsive transcription factor ERF098 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00500 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 2.3e-55 Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. ExPASy TrEMBL
Match: A0A1S3CCW3 (ethylene-responsive transcription factor ERF098 OS=Cucumis melo OX=3656 GN=LOC103499412 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 2.3e-55 Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. ExPASy TrEMBL
Match: A0A6J1KVJ6 (ethylene-responsive transcription factor ERF098-like OS=Cucurbita maxima OX=3661 GN=LOC111499097 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 6.6e-47 Identity = 103/124 (83.06%), Postives = 112/124 (90.32%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. ExPASy TrEMBL
Match: A0A6J1H2T4 (ethylene-responsive transcription factor ERF098-like OS=Cucurbita moschata OX=3662 GN=LOC111459958 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 8.6e-47 Identity = 101/122 (82.79%), Postives = 110/122 (90.16%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. TAIR 10
Match: AT3G23230.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 143.3 bits (360), Expect = 1.7e-34 Identity = 81/135 (60.00%), Postives = 96/135 (71.11%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. TAIR 10
Match: AT1G04370.1 (Ethylene-responsive element binding factor 14 ) HSP 1 Score: 138.7 bits (348), Expect = 4.1e-33 Identity = 75/123 (60.98%), Postives = 91/123 (73.98%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. TAIR 10
Match: AT5G43410.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 137.9 bits (346), Expect = 7.0e-33 Identity = 78/126 (61.90%), Postives = 89/126 (70.63%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. TAIR 10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31 Identity = 72/117 (61.54%), Postives = 87/117 (74.36%), Query Frame = 0
BLAST of CsaV3_2G012880 vs. TAIR 10
Match: AT3G23240.1 (ethylene response factor 1 ) HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22 Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|