CsaV3_2G004430 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTAGATTCCTTTCTTATCCTTGATCAATTCAAGAATTTTACAAGGAATTTCAAGGCTACACCGAAGGAAACATGAGCATTAAGAATAAAAATCTCTACCTATATTGAATTGGCATGCTTGAAGTTCCTATATAAACCATTTAGCACTAAAGAGAAAAGCCACAAGATCTCTAAGGCATAAAGAGTGAACATATCACACACCACTTAGGCTATGGCGGATTTTCGATACGGTTTCTTCGTTCGCCCGGACAACAAGAAGATCGAATCAAATCCTGCAGAATTAAAGAGCAAAGCAGGCCATATCTCCGACCCCAAATCCAAGCCACCTTATCTCGATGCCGGAGGAAGGCAACAACCTATTGCCATTCTTCCCCGAACGAGGTACGTTACACCGATCGAGAAATATACTGAAGAAGTTCATACTAAGAAGTATGAACCAGTGAAGAATTCTGATAAAGGGACTTTGAATTCACACCTTGCTATAAACCAGCGTATAGAATTCAATAAACTCTTAGCCAACGTTCAAAAGGAAGCAAGGCTGCCAAAGTATGAAATGAGATTATTAAGTGAACCAATGACTGATATTGGGAAGGCTATAGAGTGTTTGAAAGAAGTTGTGAATCTTGACTGTAGCAAAAATAATGCTTGTGCAGCATCAGCTCGTCGTAAAGACAGTTGCACAAAAACTATTGACAGCAAAGAAGCAGCACGGCGATACGGAAAGTTCGGGGCACCAGTTCCAGTGTCGAATGCTAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAAGTATAATGGTGCAGCAGTGTGAATCTAAATGAAGGAGGTTGTACTTTGTCGTGGATGTTTGTGATGATGTACTAAGTTTGCAAATATATAGGTACTGTGTGTCAAGTCAAAGGTGACTCCTTGCTTTTGTTTTATGTAAGCGAAAGGTGTGTGATACACTCTTTGTAATTTACATCCTTTTATATATAATAAAGGTTAGAGTATTAAATACAAGTTTGAGACTTTTGACGGTAATATTCATATAGCTTTGTATTGGCTAAGTTCAAGAGTTGGAGACAAGTGGACTCGAACTGCTGACATCTGCCACAAAGTAAACTACCGTCGAAAAGAGGAAAAAAACATAATCTTTGTCTAACGAAATGTCTTAGAAAGAGATCAAATTATTTACTCCATCATACCTAGTATGATAGATCTTTGGAAGAACTATATTTACGATAATATTATTGTCTTTTTTTTACTTGCATCAAACAAAGGCAAGGAGTTTTTCATTTTTTTAGGAAAAAGAATTAAAATATTGTTGCAATGAGGTTGATGAATATTATTTGAAAACAAAATACTTAGTTTGAAGTTAGTTTAGCCTATATCTTAAAATATGTTTAATTACCTATAATAGATTAATTGTTAATGTGAAACCTATAGTTTAATTTTGTAGATTCAATAAGATAAATACTGATGAGCTGATTGCAGCCTAGATGTTGGACCCATGGTTCAGCCATGACTTACAATAAGTAAGCCGTAAGGTACAAAACATGCACGGTCACCTTGTTATCTCAAACATGCTCATCTCTTAGTTGGGTCAATTGAATCCAAACCACTTTTACCCAATGAAACAAGGCCCATAAATTGGGTTGTTGGGTTTATGGGCCTATATTTAACTGAGTCGGTTGGAGAGCTCTCATATTGATATCGTCTTCTTAACCCTTCAACTTTCAATGTGGAGCAAAAGGAAACCCTCTCAAGCTTGAATTTGCTTTGTACTATGGGTGTGGGAGAGGGTTGAATTTGCTTTGTACTATGAGTGTCGGTCATTCTGAACATAGGCAGTGTATCTCATTGATTGATTCTTCAATAAATTTTCTTTATAGAAAAAAAAGGAGTAATG ATGGCGGATTTTCGATACGGTTTCTTCGTTCGCCCGGACAACAAGAAGATCGAATCAAATCCTGCAGAATTAAAGAGCAAAGCAGGCCATATCTCCGACCCCAAATCCAAGCCACCTTATCTCGATGCCGGAGGAAGGCAACAACCTATTGCCATTCTTCCCCGAACGAGGTACGTTACACCGATCGAGAAATATACTGAAGAAGTTCATACTAAGAAGTATGAACCAGTGAAGAATTCTGATAAAGGGACTTTGAATTCACACCTTGCTATAAACCAGCGTATAGAATTCAATAAACTCTTAGCCAACGTTCAAAAGGAAGCAAGGCTGCCAAAGTATGAAATGAGATTATTAAGTGAACCAATGACTGATATTGGGAAGGCTATAGAGTGTTTGAAAGAAGTTGTGAATCTTGACTGTAGCAAAAATAATGCTTGTGCAGCATCAGCTCGTCGTAAAGACAGTTGCACAAAAACTATTGACAGCAAAGAAGCAGCACGGCGATACGGAAAGTTCGGGGCACCAGTTCCAGTGTCGAATGCTAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAAGTATAATGGTGCAGCAGTGTGA ATGGCGGATTTTCGATACGGTTTCTTCGTTCGCCCGGACAACAAGAAGATCGAATCAAATCCTGCAGAATTAAAGAGCAAAGCAGGCCATATCTCCGACCCCAAATCCAAGCCACCTTATCTCGATGCCGGAGGAAGGCAACAACCTATTGCCATTCTTCCCCGAACGAGGTACGTTACACCGATCGAGAAATATACTGAAGAAGTTCATACTAAGAAGTATGAACCAGTGAAGAATTCTGATAAAGGGACTTTGAATTCACACCTTGCTATAAACCAGCGTATAGAATTCAATAAACTCTTAGCCAACGTTCAAAAGGAAGCAAGGCTGCCAAAGTATGAAATGAGATTATTAAGTGAACCAATGACTGATATTGGGAAGGCTATAGAGTGTTTGAAAGAAGTTGTGAATCTTGACTGTAGCAAAAATAATGCTTGTGCAGCATCAGCTCGTCGTAAAGACAGTTGCACAAAAACTATTGACAGCAAAGAAGCAGCACGGCGATACGGAAAGTTCGGGGCACCAGTTCCAGTGTCGAATGCTAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAAGTATAATGGTGCAGCAGTGTGA MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVTPIEKYTEEVHTKKYEPVKNSDKGTLNSHLAINQRIEFNKLLANVQKEARLPKYEMRLLSEPMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEAARRYGKFGAPVPVSNANVATIDCKEAARKYNGAAV* Homology
BLAST of CsaV3_2G004430 vs. NCBI nr
Match: KGN60838.1 (hypothetical protein Csa_019431 [Cucumis sativus]) HSP 1 Score: 400.2 bits (1027), Expect = 1.0e-107 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CsaV3_2G004430 vs. NCBI nr
Match: KAA0063635.1 (hypothetical protein E6C27_scaffold329G001480 [Cucumis melo var. makuwa] >TYK18391.1 hypothetical protein E5676_scaffold456G001150 [Cucumis melo var. makuwa]) HSP 1 Score: 336.3 bits (861), Expect = 1.9e-88 Identity = 171/200 (85.50%), Postives = 182/200 (91.00%), Query Frame = 0
BLAST of CsaV3_2G004430 vs. NCBI nr
Match: ADN33904.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 334.7 bits (857), Expect = 5.4e-88 Identity = 170/200 (85.00%), Postives = 181/200 (90.50%), Query Frame = 0
BLAST of CsaV3_2G004430 vs. NCBI nr
Match: KAG6599284.1 (putative nucleolar protein 5-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 198.4 bits (503), Expect = 6.0e-47 Identity = 118/215 (54.88%), Postives = 138/215 (64.19%), Query Frame = 0
BLAST of CsaV3_2G004430 vs. NCBI nr
Match: XP_022743270.1 (uncharacterized protein LOC111294277 [Durio zibethinus] >XP_022743271.1 uncharacterized protein LOC111294277 [Durio zibethinus]) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-05 Identity = 38/89 (42.70%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of CsaV3_2G004430 vs. ExPASy TrEMBL
Match: A0A0A0LG87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G012700 PE=4 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 5.1e-108 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CsaV3_2G004430 vs. ExPASy TrEMBL
Match: A0A5A7VCJ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001150 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 9.0e-89 Identity = 171/200 (85.50%), Postives = 182/200 (91.00%), Query Frame = 0
BLAST of CsaV3_2G004430 vs. ExPASy TrEMBL
Match: E5GBR2 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 2.6e-88 Identity = 170/200 (85.00%), Postives = 181/200 (90.50%), Query Frame = 0
BLAST of CsaV3_2G004430 vs. ExPASy TrEMBL
Match: A0A6P5YSZ0 (uncharacterized protein LOC111294277 OS=Durio zibethinus OX=66656 GN=LOC111294277 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 9.5e-06 Identity = 38/89 (42.70%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of CsaV3_2G004430 vs. ExPASy TrEMBL
Match: A0A1R3JVS0 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_13630 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.2e-05 Identity = 39/93 (41.94%), Postives = 49/93 (52.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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