CsaV3_2G004130 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G004130
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionAuxin-responsive protein
Locationchr2: 2140306 .. 2142296 (+)
RNA-Seq ExpressionCsaV3_2G004130
SyntenyCsaV3_2G004130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTAATAAAAAAATAAGTTGATGTATAATCATTTTAATTCAAACTACAGACCTCTTCATTAATAATATTTTGGTTAAGCCTTTGTTAGGAATAATTCGATATCCTAACATAAGAGAATCCTCAACCACAAGATATAGAGCGCGTGGCGAAGACGCACTTGGTAGGGAAGTGGGGGAAATGATAGGCTCTTTAGCTTTAATCGGCTTCTATAAAATACGTTTGAGCGTTATTTGGGCCAACAAGCATTTCCATTTCTTCTCTTCATAACTTTCCTCTCCGCCTTCTGTTTGTTTTCCGAGAAAAAAATCATATTGTACACAAATCCATCGGAAAATTCAGCAAACCCATTTCAGAGAAGCAAAAATTCAACAATGGCCTTTGAGAAAGATCTCAACTTGGAAGCCACCGAGCTCCGATTGGGTCTCCCGGGAACTTCACCCGACGATCAATCTAATTCTCCCATCAACCGAACCAACTCCAACAAAAGAGCTTTGCCCTCCGACGACCAAAACTCCTCCGAATCTCGCCGAGAAATTAACTCTGATACCTCCAAATGCAGCCAAGAAAATACCCCTCCTACCAAGTAAGAACTTTTATCAAACAGTAAAGTTTTGGTTTATTATTTCTAAAAATTTAGAAATTAGTTAGATTTTGGGGTTTTTTTTCTTCTTAAATTAGAATTTGACAGAAATATTTTATATTTAATAGGGCACAAGTTGTGGGGTGGCCACCGGTGAGATCATTTCGAAAGAATTCTTTACAAGCAAAGAAAAAAGAAGAGACGGCGGCCGGAATGTTCATAAAAGTGAGCATGGATGGAGCTCCATTTCTTAGGAAAGTTGATCTTAAGATCTATCAAGGATATCCTGACCTTCTTCAAGCTTTGGAGAACATGTTCAAATTTTCTCTTGGTAAGTATATATTATTTCTTTCAAATATAATCCGATCTCTTAATTAGATCTTGAGATCTCTCTCTTTAATGATGAAAAATTATTGATGTTTTCTTTCTTTGAATGTTTTTTCAGGCAAGTTTTGTGAGAGAGAAGGATATAATGGGTCGGAATTTGTTCCAACGTATGAAGATAAAGATGGTGACTGGATGCTCGTCGGCGATGTTCCATGGGAGTAAGTTTCTTATCTCTACATAAAATAAAATGCATGCATGGATATTTTTACTCTATTAGTTATATTTGAACATTTTTTTACGTAATAGTTTGGTGAAGATCTGATTCTTTAGAAGATACATTAGCTACAACTACTCCTATTATCGAATAGTTTATGTAATATAATATAGTATCAAAACCAATTTAGATCGATTATTGATTGGTTTATATGAAATTTTGCAGAATGTTCATGAGCTCATGCAAGAAGCTAAGGATCATGAAAGGATCAGAAGCAAAAGGTTTAGGCTGTGGATCAGTGTGAAATAAAGAAAGAAAAAATGAAAGTGAAAAAAGGGATTAGAGAGCACCCCAAATTGCTCTCTTTTTTATAAGATCGTCGGAAAAGTCGTGAAAGTTAATCACAACCGCCATGGATTTGCCGGCGGAGTGCAACCGCAACCGCCGGCCGACTTGCCGATGATCTGACTGAATTCGATCTCGTGTAAATGTTTATGAAAAATCAGATCTTGATTTGCTTAGAGAGAGAGAAGGAGAAAGAGGGGTTGATGATGAAGAGTTAATTAAGACCCCAAAACAAATAAGTGAATTGAGTTTTTTTAATCTTTTTTTTGGTGATTATATTCATATTTATTTCTTGTGGGGGGATAATGTAATTGAATTCAAGATAGGTTGGAAATTATGTTAATTACCCCCAAAGAGTTTGTATATGTAATTGAATGTGATATATAATCATCAATTCCAATAGAAATGATCTTTCTTTCTTTTTTAATTCATGATATATATCTATTCTTATTGAGTTTAAATGTTGAAGCATATTATATTTAACATTTGTTTTATTTTCAACAAATAATTGACATATGAACTTT

mRNA sequence

ATGGCCTTTGAGAAAGATCTCAACTTGGAAGCCACCGAGCTCCGATTGGGTCTCCCGGGAACTTCACCCGACGATCAATCTAATTCTCCCATCAACCGAACCAACTCCAACAAAAGAGCTTTGCCCTCCGACGACCAAAACTCCTCCGAATCTCGCCGAGAAATTAACTCTGATACCTCCAAATGCAGCCAAGAAAATACCCCTCCTACCAAGGCACAAGTTGTGGGGTGGCCACCGGTGAGATCATTTCGAAAGAATTCTTTACAAGCAAAGAAAAAAGAAGAGACGGCGGCCGGAATGTTCATAAAAGTGAGCATGGATGGAGCTCCATTTCTTAGGAAAGTTGATCTTAAGATCTATCAAGGATATCCTGACCTTCTTCAAGCTTTGGAGAACATGTTCAAATTTTCTCTTGGCAAGTTTTGTGAGAGAGAAGGATATAATGGGTCGGAATTTGTTCCAACGTATGAAGATAAAGATGGTGACTGGATGCTCGTCGGCGATGTTCCATGGGAAATGTTCATGAGCTCATGCAAGAAGCTAAGGATCATGAAAGGATCAGAAGCAAAAGGTTTAGGCTGTGGATCAGTGTGA

Coding sequence (CDS)

ATGGCCTTTGAGAAAGATCTCAACTTGGAAGCCACCGAGCTCCGATTGGGTCTCCCGGGAACTTCACCCGACGATCAATCTAATTCTCCCATCAACCGAACCAACTCCAACAAAAGAGCTTTGCCCTCCGACGACCAAAACTCCTCCGAATCTCGCCGAGAAATTAACTCTGATACCTCCAAATGCAGCCAAGAAAATACCCCTCCTACCAAGGCACAAGTTGTGGGGTGGCCACCGGTGAGATCATTTCGAAAGAATTCTTTACAAGCAAAGAAAAAAGAAGAGACGGCGGCCGGAATGTTCATAAAAGTGAGCATGGATGGAGCTCCATTTCTTAGGAAAGTTGATCTTAAGATCTATCAAGGATATCCTGACCTTCTTCAAGCTTTGGAGAACATGTTCAAATTTTCTCTTGGCAAGTTTTGTGAGAGAGAAGGATATAATGGGTCGGAATTTGTTCCAACGTATGAAGATAAAGATGGTGACTGGATGCTCGTCGGCGATGTTCCATGGGAAATGTTCATGAGCTCATGCAAGAAGCTAAGGATCATGAAAGGATCAGAAGCAAAAGGTTTAGGCTGTGGATCAGTGTGA

Protein sequence

MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKKLRIMKGSEAKGLGCGSV*
Homology
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BLAST of CsaV3_2G004130 vs. NCBI nr
Match: XP_004139234.1 (auxin-responsive protein IAA4 [Cucumis sativus] >KGN60809.1 hypothetical protein Csa_019290 [Cucumis sativus])

HSP 1 Score: 399.1 bits (1024), Expect = 2.3e-107
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY 120
           KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY
Sbjct: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY 120

Query: 121 QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKK 180
           QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKK
Sbjct: 121 QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKK 180

Query: 181 LRIMKGSEAKGLGCGSV 198
           LRIMKGSEAKGLGCGSV
Sbjct: 181 LRIMKGSEAKGLGCGSV 197

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BLAST of CsaV3_2G004130 vs. NCBI nr
Match: XP_008455974.1 (PREDICTED: auxin-induced protein 22D-like [Cucumis melo] >KAA0063607.1 auxin-induced protein 22D-like [Cucumis melo var. makuwa] >TYK18420.1 auxin-induced protein 22D-like [Cucumis melo var. makuwa])

HSP 1 Score: 382.9 bits (982), Expect = 1.7e-102
Identity = 191/198 (96.46%), Postives = 192/198 (96.97%), Query Frame = 0 

Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQN  ESRREINSD S
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNPLESRREINSDPS 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEE-TAAGMFIKVSMDGAPFLRKVDLKI 120
           KC+QENTPPTKAQVVGWPPVRSFRKN LQAKKKEE  AAGMFIKVSMDGAPFLRKVDLKI
Sbjct: 61  KCTQENTPPTKAQVVGWPPVRSFRKNCLQAKKKEEAAAAGMFIKVSMDGAPFLRKVDLKI 120

Query: 121 YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCK 180
           YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCK
Sbjct: 121 YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCK 180

Query: 181 KLRIMKGSEAKGLGCGSV 198
           KLRIMKGSEAKGLGCGSV
Sbjct: 181 KLRIMKGSEAKGLGCGSV 198

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BLAST of CsaV3_2G004130 vs. NCBI nr
Match: XP_038889147.1 (auxin-induced protein 22D-like [Benincasa hispida])

HSP 1 Score: 367.5 bits (942), Expect = 7.4e-98
Identity = 185/200 (92.50%), Postives = 188/200 (94.00%), Query Frame = 0 

Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQS SPINR NSNKRALPSDDQN  ESRREINSD +
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQS-SPINRANSNKRALPSDDQNLPESRREINSDPT 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAA---GMFIKVSMDGAPFLRKVDL 120
           KC+QEN PPTKAQVVGWPPVRSFRKN  QAKKK+E AA   GMFIKVSMDGAPFLRKVDL
Sbjct: 61  KCNQENPPPTKAQVVGWPPVRSFRKNCFQAKKKDEAAAAATGMFIKVSMDGAPFLRKVDL 120

Query: 121 KIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSS 180
           KIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSS
Sbjct: 121 KIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSS 180

Query: 181 CKKLRIMKGSEAKGLGCGSV 198
           CKKLRIMKGSEAKGLGCGSV
Sbjct: 181 CKKLRIMKGSEAKGLGCGSV 199

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BLAST of CsaV3_2G004130 vs. NCBI nr
Match: BAA85822.1 (Aux/IAA protein, partial [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 3.2e-93
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0 

Query: 12  TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK 71
           TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK
Sbjct: 1   TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK 60

Query: 72  AQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALE 131
           AQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALE
Sbjct: 61  AQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALE 120

Query: 132 NMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKKLRIMK 186
           NMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCK+LRIMK
Sbjct: 121 NMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMK 174

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BLAST of CsaV3_2G004130 vs. NCBI nr
Match: KAG6599309.1 (Auxin-induced protein 22D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345.1 bits (884), Expect = 3.9e-91
Identity = 176/203 (86.70%), Postives = 180/203 (88.67%), Query Frame = 0 

Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQS SPINR  SNKRALPSDDQN  ES R+ NSD +
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQS-SPINRIISNKRALPSDDQNPPESGRDSNSDLT 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAA------GMFIKVSMDGAPFLRK 120
           K  QEN PPTKAQVVGWPPVRSFRKN  QAKKK+E AA      GMFIKVSMDGAPFLRK
Sbjct: 61  KSDQENPPPTKAQVVGWPPVRSFRKNCFQAKKKDEVAAATTAAGGMFIKVSMDGAPFLRK 120

Query: 121 VDLKIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMF 180
           VDLK YQGYP+LLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMF
Sbjct: 121 VDLKTYQGYPELLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMF 180

Query: 181 MSSCKKLRIMKGSEAKGLGCGSV 198
           M SCKKLRIMKGSEAKGL CGSV
Sbjct: 181 MGSCKKLRIMKGSEAKGLSCGSV 202

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BLAST of CsaV3_2G004130 vs. ExPASy Swiss-Prot
Match: O24542 (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.4e-62
Identity = 121/194 (62.37%), Postives = 150/194 (77.32%), Query Frame = 0 

Query: 2   AFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSK 61
           ++EK+LNL+ATELRLGLPG+   ++  +      SNKR+ P      S S     SD +K
Sbjct: 7   SYEKELNLKATELRLGLPGSDEPEKRAT----ARSNKRSSPEASDEESISN---GSDVTK 66

Query: 62  CSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAA-GMFIKVSMDGAPFLRKVDLKIY 121
                 PP KAQVVGWPP+RS+RKN++Q KK+EE+   GM++KVSM GAP+LRK+DLK+Y
Sbjct: 67  -EDNVVPPAKAQVVGWPPIRSYRKNNVQQKKEEESEGNGMYVKVSMAGAPYLRKIDLKVY 126

Query: 122 QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKK 181
           + YP+LL+ALENMFK   G++ EREGYNGSE+ PTYEDKDGDWMLVGDVPW MF+SSCK+
Sbjct: 127 KSYPELLKALENMFKCIFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKR 186

Query: 182 LRIMKGSEAKGLGC 195
           LRIMKGSEAKGLGC
Sbjct: 187 LRIMKGSEAKGLGC 192

[Close]
BLAST of CsaV3_2G004130 vs. ExPASy Swiss-Prot
Match: O24543 (Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 5.2e-62
Identity = 122/203 (60.10%), Postives = 155/203 (76.35%), Query Frame = 0 

Query: 2   AFEKDLNLEATELRLGLPGTSPDDQSNSPINRT---NSNKRALPSDDQNSSESRREINSD 61
           ++E +LNL ATELRLGLPG S + Q   P + +   +SNKR+ P  +   S  +  INSD
Sbjct: 3   SYETELNLRATELRLGLPG-SDEPQEKRPCSGSVVRSSNKRSSP--ELEESRCKSNINSD 62

Query: 62  ------TSKCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEE-TAAGMFIKVSMDGAPF 121
                 TS  ++++  P K QVVGWPP+RSFRKNSLQ KK E+    GM++KVSM GAP+
Sbjct: 63  SSDSTTTSDHNEDSVQPAKVQVVGWPPIRSFRKNSLQQKKVEQGDGTGMYLKVSMAGAPY 122

Query: 122 LRKVDLKIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPW 181
           LRK+DLK+Y+ YP+LL+AL+N+FK + G++ EREGYNGSE+ PTYEDKDGDWMLVGDVPW
Sbjct: 123 LRKIDLKVYKSYPELLKALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPW 182

Query: 182 EMFMSSCKKLRIMKGSEAKGLGC 195
            MF+SSCK+LRI+KGSEAKGLGC
Sbjct: 183 NMFVSSCKRLRIIKGSEAKGLGC 202

[Close]
BLAST of CsaV3_2G004130 vs. ExPASy Swiss-Prot
Match: P33077 (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2)

HSP 1 Score: 238.8 bits (608), Expect = 5.2e-62
Identity = 118/195 (60.51%), Postives = 147/195 (75.38%), Query Frame = 0 

Query: 3   FEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKC 62
           +++ +NL+ATELRLGLPGT         ++   SNKR LP   +   ES       T K 
Sbjct: 7   YDELVNLKATELRLGLPGT------EETVSCGKSNKRVLPEATEKEIES-------TGK- 66

Query: 63  SQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQG 122
             E   P KAQ+VGWPPVRS+RKN++Q KK E    G ++KVSMDGAP+LRK+DL +Y+ 
Sbjct: 67  -TETASPPKAQIVGWPPVRSYRKNNVQTKKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQ 126

Query: 123 YPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKKLR 182
           YP+L+++LENMFKFS+G++ EREGY GS+FVPTYEDKDGDWMLVGDVPWEMF+SSCK+LR
Sbjct: 127 YPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLR 186

Query: 183 IMKGSEAKGLGCGSV 198
           IMKGSE KGLGCG +
Sbjct: 187 IMKGSEVKGLGCGGL 186

[Close]
BLAST of CsaV3_2G004130 vs. ExPASy Swiss-Prot
Match: Q38822 (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 9.8e-61
Identity = 116/192 (60.42%), Postives = 151/192 (78.65%), Query Frame = 0 

Query: 7   LNLEATELRLGLPGTSPDDQSNSPIN-RTNSNKRALPSDDQNSSESRREINSDTSKCSQE 66
           +NL+ TELRLGLPGT    ++   ++   N+NKR L      S+++ +EI S + K   E
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVL------STDTEKEIESSSRK--TE 64

Query: 67  NTPPTKAQVVGWPPVRSFRKNSLQAKK--KEETAAGMFIKVSMDGAPFLRKVDLKIYQGY 126
            +PP KAQ+VGWPPVRS+RKN++Q+KK   E    G+++KVSMDGAP+LRK+DL  Y+GY
Sbjct: 65  TSPPRKAQIVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGY 124

Query: 127 PDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKKLRI 186
            +LL+ALE MFKFS+G++ ER+GY GS+FVPTYEDKDGDWML+GDVPWEMF+ +CK+LRI
Sbjct: 125 SELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRI 184

Query: 187 MKGSEAKGLGCG 196
           MKGSEAKGLGCG
Sbjct: 185 MKGSEAKGLGCG 188

[Close]
BLAST of CsaV3_2G004130 vs. ExPASy Swiss-Prot
Match: P32294 (Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.7e-60
Identity = 112/194 (57.73%), Postives = 143/194 (73.71%), Query Frame = 0 

Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           + FE DLNL+ATELRLGLPGT   + +N   +    N +    +    S S  + +    
Sbjct: 5   VVFESDLNLKATELRLGLPGTEEKEDNNLRTHAVLRNNKRQVRETSQDSVSISKASHHQQ 64

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY 120
                + PP KA++VGWPP+RS+RKNS+Q    E    G+F+KVSMDGAP+LRKVDLK+Y
Sbjct: 65  HVETVSAPPPKAKIVGWPPIRSYRKNSVQ----EGEGDGIFVKVSMDGAPYLRKVDLKVY 124

Query: 121 QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKK 180
            GYP+LL+ALE MFK ++G++ EREGY GSE+ PTYEDKDGDWMLVGDVPW+MF++SCK+
Sbjct: 125 GGYPELLKALETMFKLAIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKR 184

Query: 181 LRIMKGSEAKGLGC 195
           LRIMKGSEA+GLGC
Sbjct: 185 LRIMKGSEARGLGC 194

[Close]
BLAST of CsaV3_2G004130 vs. ExPASy TrEMBL
Match: A0A0A0LID4 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G011420 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.1e-107
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY 120
           KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY
Sbjct: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY 120

Query: 121 QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKK 180
           QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKK
Sbjct: 121 QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKK 180

Query: 181 LRIMKGSEAKGLGCGSV 198
           LRIMKGSEAKGLGCGSV
Sbjct: 181 LRIMKGSEAKGLGCGSV 197

[Close]
BLAST of CsaV3_2G004130 vs. ExPASy TrEMBL
Match: A0A5A7V9G4 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001460 PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 8.3e-103
Identity = 191/198 (96.46%), Postives = 192/198 (96.97%), Query Frame = 0 

Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQN  ESRREINSD S
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNPLESRREINSDPS 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEE-TAAGMFIKVSMDGAPFLRKVDLKI 120
           KC+QENTPPTKAQVVGWPPVRSFRKN LQAKKKEE  AAGMFIKVSMDGAPFLRKVDLKI
Sbjct: 61  KCTQENTPPTKAQVVGWPPVRSFRKNCLQAKKKEEAAAAGMFIKVSMDGAPFLRKVDLKI 120

Query: 121 YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCK 180
           YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCK
Sbjct: 121 YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCK 180

Query: 181 KLRIMKGSEAKGLGCGSV 198
           KLRIMKGSEAKGLGCGSV
Sbjct: 181 KLRIMKGSEAKGLGCGSV 198

[Close]
BLAST of CsaV3_2G004130 vs. ExPASy TrEMBL
Match: A0A1S3C3E2 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103496036 PE=3 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 8.3e-103
Identity = 191/198 (96.46%), Postives = 192/198 (96.97%), Query Frame = 0 

Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQN  ESRREINSD S
Sbjct: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNPLESRREINSDPS 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEE-TAAGMFIKVSMDGAPFLRKVDLKI 120
           KC+QENTPPTKAQVVGWPPVRSFRKN LQAKKKEE  AAGMFIKVSMDGAPFLRKVDLKI
Sbjct: 61  KCTQENTPPTKAQVVGWPPVRSFRKNCLQAKKKEEAAAAGMFIKVSMDGAPFLRKVDLKI 120

Query: 121 YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCK 180
           YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCK
Sbjct: 121 YQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCK 180

Query: 181 KLRIMKGSEAKGLGCGSV 198
           KLRIMKGSEAKGLGCGSV
Sbjct: 181 KLRIMKGSEAKGLGCGSV 198

[Close]
BLAST of CsaV3_2G004130 vs. ExPASy TrEMBL
Match: Q9SSY1 (Auxin-responsive protein (Fragment) OS=Cucumis sativus OX=3659 GN=CsIAA3 PE=2 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.6e-93
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0 

Query: 12  TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK 71
           TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK
Sbjct: 1   TELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQENTPPTK 60

Query: 72  AQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALE 131
           AQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALE
Sbjct: 61  AQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQGYPDLLQALE 120

Query: 132 NMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKKLRIMK 186
           NMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCK+LRIMK
Sbjct: 121 NMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMK 174

[Close]
BLAST of CsaV3_2G004130 vs. ExPASy TrEMBL
Match: A0A6J1G4Q6 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111450780 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.2e-91
Identity = 175/201 (87.06%), Postives = 180/201 (89.55%), Query Frame = 0 

Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           MAF+KDLNLEATELRLGLPGTSPDDQS SPINR  SNKRALPSDDQN  ES R+ NSD +
Sbjct: 1   MAFQKDLNLEATELRLGLPGTSPDDQS-SPINRIISNKRALPSDDQNPPESGRDSNSDLT 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAA----GMFIKVSMDGAPFLRKVD 120
           K  QEN PPTKAQVVGWPPVRSFRKN  QAKKK+E AA    GMFIKVSMDGAPFLRKVD
Sbjct: 61  KSDQENPPPTKAQVVGWPPVRSFRKNCFQAKKKDEGAATAAGGMFIKVSMDGAPFLRKVD 120

Query: 121 LKIYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMS 180
           LK YQGYP+LLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFM 
Sbjct: 121 LKTYQGYPELLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMG 180

Query: 181 SCKKLRIMKGSEAKGLGCGSV 198
           SCKKLRIMKGSEAKGL CGSV
Sbjct: 181 SCKKLRIMKGSEAKGLSCGSV 200

[Close]
BLAST of CsaV3_2G004130 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 238.8 bits (608), Expect = 3.7e-63
Identity = 118/195 (60.51%), Postives = 147/195 (75.38%), Query Frame = 0 

Query: 3   FEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKC 62
           +++ +NL+ATELRLGLPGT         ++   SNKR LP   +   ES       T K 
Sbjct: 7   YDELVNLKATELRLGLPGT------EETVSCGKSNKRVLPEATEKEIES-------TGK- 66

Query: 63  SQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIYQG 122
             E   P KAQ+VGWPPVRS+RKN++Q KK E    G ++KVSMDGAP+LRK+DL +Y+ 
Sbjct: 67  -TETASPPKAQIVGWPPVRSYRKNNVQTKKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQ 126

Query: 123 YPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKKLR 182
           YP+L+++LENMFKFS+G++ EREGY GS+FVPTYEDKDGDWMLVGDVPWEMF+SSCK+LR
Sbjct: 127 YPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLR 186

Query: 183 IMKGSEAKGLGCGSV 198
           IMKGSE KGLGCG +
Sbjct: 187 IMKGSEVKGLGCGGL 186

[Close]
BLAST of CsaV3_2G004130 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 234.6 bits (597), Expect = 7.0e-62
Identity = 116/192 (60.42%), Postives = 151/192 (78.65%), Query Frame = 0 

Query: 7   LNLEATELRLGLPGTSPDDQSNSPIN-RTNSNKRALPSDDQNSSESRREINSDTSKCSQE 66
           +NL+ TELRLGLPGT    ++   ++   N+NKR L      S+++ +EI S + K   E
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVL------STDTEKEIESSSRK--TE 64

Query: 67  NTPPTKAQVVGWPPVRSFRKNSLQAKK--KEETAAGMFIKVSMDGAPFLRKVDLKIYQGY 126
            +PP KAQ+VGWPPVRS+RKN++Q+KK   E    G+++KVSMDGAP+LRK+DL  Y+GY
Sbjct: 65  TSPPRKAQIVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGY 124

Query: 127 PDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKKLRI 186
            +LL+ALE MFKFS+G++ ER+GY GS+FVPTYEDKDGDWML+GDVPWEMF+ +CK+LRI
Sbjct: 125 SELLKALEVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRI 184

Query: 187 MKGSEAKGLGCG 196
           MKGSEAKGLGCG
Sbjct: 185 MKGSEAKGLGCG 188

[Close]
BLAST of CsaV3_2G004130 vs. TAIR 10
Match: AT3G23030.1 (indole-3-acetic acid inducible 2 )

HSP 1 Score: 208.4 bits (529), Expect = 5.4e-54
Identity = 109/194 (56.19%), Postives = 135/194 (69.59%), Query Frame = 0 

Query: 1   MAFEK--DLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSD 60
           MA+EK  +LNL+ TEL LGLPG +   +    ++   SN + L        E+R E    
Sbjct: 1   MAYEKVNELNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRL------FEETRDE---- 60

Query: 61  TSKCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLK 120
                +E+TPPTK Q+VGWPPVRS RKN+             ++KVSMDGAP+LRK+DLK
Sbjct: 61  -----EESTPPTKTQIVGWPPVRSSRKNNNSVS---------YVKVSMDGAPYLRKIDLK 120

Query: 121 IYQGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSC 180
            Y+ YP+LL+ALENMFK  +G++CEREGY GS FVPTYEDKDGDWMLVGDVPW+MF SSC
Sbjct: 121 TYKNYPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSC 170

Query: 181 KKLRIMKGSEAKGL 193
           K+LRIMKGS+A  L
Sbjct: 181 KRLRIMKGSDAPAL 170

[Close]
BLAST of CsaV3_2G004130 vs. TAIR 10
Match: AT4G14560.1 (indole-3-acetic acid inducible )

HSP 1 Score: 201.1 bits (510), Expect = 8.6e-52
Identity = 103/189 (54.50%), Postives = 130/189 (68.78%), Query Frame = 0 

Query: 1   MAFEKDLNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTS 60
           M     LNL+ TELRLGLPG   + Q      R+N+ ++                N+D++
Sbjct: 1   MEVTNGLNLKDTELRLGLPGAQEEQQLELSCVRSNNKRK----------------NNDST 60

Query: 61  KCSQENTPPTKAQVVGWPPVRSFRKNSLQAKKKEETAAGMFIKVSMDGAPFLRKVDLKIY 120
           +  +   PP K Q+VGWPPVRS RKN+             ++KVSMDGAP+LRK+DLK+Y
Sbjct: 61  E--ESAPPPAKTQIVGWPPVRSNRKNNNNKNVS-------YVKVSMDGAPYLRKIDLKMY 120

Query: 121 QGYPDLLQALENMFKFSLGKFCEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKK 180
           + YP+LL+ALENMFKF++G++ EREGY GS FVPTYEDKDGDWMLVGDVPW+MF SSC+K
Sbjct: 121 KNYPELLKALENMFKFTVGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQK 164

Query: 181 LRIMKGSEA 190
           LRIMKGSEA
Sbjct: 181 LRIMKGSEA 164

[Close]
BLAST of CsaV3_2G004130 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 166.4 bits (420), Expect = 2.3e-41
Identity = 103/227 (45.37%), Postives = 131/227 (57.71%), Query Frame = 0 

Query: 7   LNLEATELRLGLPGTSPDDQSNSPINRTNSNKRALPSDDQNSSESRREINSDTSKCSQEN 66
           +N EATELRLGLPG    +       + N  +    + D   + S   ++S  SK   EN
Sbjct: 2   INFEATELRLGLPG---GNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDS-VSKVDLEN 61

Query: 67  ------TPPTKAQVVGWPPVRSFRKNSLQAKK-----------KEETAAG---------- 126
                  PP KAQVVGWPPVRSFRKN +  +K           K   ++G          
Sbjct: 62  MKEKVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACAT 121

Query: 127 -MFIKVSMDGAPFLRKVDLKIYQGYPDLLQALENMF-KFSLGKFCER------------E 186
             ++KVSMDGAP+LRK+DLK+Y+ Y DL  AL  MF  F++G +  +            +
Sbjct: 122 VAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLID 181

Query: 187 GYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSSCKKLRIMKGSEAKGL 193
             NGS++VPTYEDKDGDWMLVGDVPWEMF+ SCK++RIMKGSEA GL
Sbjct: 182 LLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGL 224

The following BLAST results are available for this feature:
BLAST of CsaV3_2G004130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139234.12.3e-107100.00auxin-responsive protein IAA4 [Cucumis sativus] >KGN60809.1 hypothetical protein... [more]
XP_008455974.11.7e-10296.46PREDICTED: auxin-induced protein 22D-like [Cucumis melo] >KAA0063607.1 auxin-ind... [more]
XP_038889147.17.4e-9892.50auxin-induced protein 22D-like [Benincasa hispida][more]
BAA85822.13.2e-9399.43Aux/IAA protein, partial [Cucumis sativus][more]
KAG6599309.13.9e-9186.70Auxin-induced protein 22D, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of CsaV3_2G004130 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O245421.4e-6262.37Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 S... [more]
O245435.2e-6260.10Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 S... [more]
P330775.2e-6260.51Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2[more]
Q388229.8e-6160.42Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1[more]
P322943.7e-6057.73Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 S... [more]
BLAST of CsaV3_2G004130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LID41.1e-107100.00Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G011420 PE=3 SV=1[more]
A0A5A7V9G48.3e-10396.46Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3C3E28.3e-10396.46Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103496036 PE=3 SV=1[more]
Q9SSY11.6e-9399.43Auxin-responsive protein (Fragment) OS=Cucumis sativus OX=3659 GN=CsIAA3 PE=2 SV... [more]
A0A6J1G4Q64.2e-9187.06Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111450780 PE=3 SV=1[more]
BLAST of CsaV3_2G004130 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G43700.13.7e-6360.51AUX/IAA transcriptional regulator family protein [more]
AT1G04240.17.0e-6260.42AUX/IAA transcriptional regulator family protein [more]
AT3G23030.15.4e-5456.19indole-3-acetic acid inducible 2 [more]
AT4G14560.18.6e-5254.50indole-3-acetic acid inducible [more]
AT3G04730.12.3e-4145.37indoleacetic acid-induced protein 16 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 93..197
e-value: 9.7E-44
score: 149.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..59
NoneNo IPR availablePANTHERPTHR31734:SF167AUXIN-RESPONSIVE PROTEINcoord: 1..194
NoneNo IPR availableSUPERFAMILY54277CAD & PB1 domainscoord: 97..185
IPR033389AUX/IAA domainPFAMPF02309AUX_IAAcoord: 12..193
e-value: 1.3E-58
score: 198.8
IPR003311AUX/IAA proteinPANTHERPTHR31734AUXIN-RESPONSIVE PROTEIN IAA17coord: 1..194
IPR000270PB1 domainPROSITEPS51745PB1coord: 99..186
score: 26.528988

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G004130.1CsaV3_2G004130.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding