CsaV3_1G046450 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G046450
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	TLC domain-containing protein
Location	chr1: 32278570 .. 32283581 (+)
RNA-Seq Expression	CsaV3_1G046450
Synteny	CsaV3_1G046450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCTTTGTCACGATGCATACCATATTGAAGTAATAATTAAAATAAAAAGGAAAAGAAATCATCGGCCAAGGCGCGAAGCTATCATATTCCTTCGGTTACCAGTAGTGCAAGGATTGGATAGATAGAATGCAATTGAATGAATGAATCCACATGAACACGAGGATCCCATCTCTGGACACTCAAATCCATTGCTCATTAGCAAAAAACACTTGCATTTCGCATTACCCAATTCCTCATACGCTATATTATCATTTCTAATTTCTCTTCATCTTCCCTTGATTTCCCCCTTTTGGATTTTGAAGATTCCTAATGCTTCACATTGATTCAACCTCACGGTTTTTTTGTACCGGTCGGTTGTTGCATTCCCTTTACACATTATCTTATTTTGTTTTCTTCCCATTTTCTTATCTTTCAAAAAGCGAAAAAAACCCACCTTCTACATCTTCTCCTGATCTGGGGTTTTCATCTATCAGGTATTGATTCTATCTCTTATTTCTTTTGGCTGTGATTTCTATCTTTTCTTCCATTTTTATGGGTTACCCATTTGGATTTTGATCATTTAATTTGATGGGATCTTTTAGTTTGTTCTTTTATACTTATGAATTTGTGTGCTTGCTGTTAGTTCCACCATTCGATCTTTAAGCTTACCTGGTTATAAGCTTTTTTAGCGTTTTGGGGGTTTGTTCCAGAAATTGCATCCTCTTGCAGTTTGTTTAAATTCAATGAGTGTGCATCATTTCTAGTTTAGGCAGTCCTTTTGTTCCGCTCCAGCAAATCTGTTTTACTGGAACATTTGATCTTATATGTGTTGTTGAATTTTTCTCCTTTTTTTCTCTAGTTTTCTGTTCAAGTCTTTATGTTTGAGTTCGGAGTGTTCAAAAAGGAATTAGTATAGATCTTCGGAATGATCATGAAAGTTGAAGATTACTTGAACACAGTGACAGCTACTGCTTTAGAAAACATATATGAAAATAATGAATGGGATGTGTTATTTGTCAAAAGGGTCTATATGATCATGATGTGACTCTGTAGATGTTAGGATGACGTTTTTTGACATTGCAGTTTAATGTCTCTAATTAGAGTTTTCTACGCAAAGTTGTGTAATTAAATATTTTTATGATAGATCTGGACGGGGGAGATTTAATTTTTGATCCTATAAGAAAAATAAAAACTATGGAACCACTTTAGCTAAATGATTCTTGTGCTTTTTTGTGGGAAGTTCCGAATGAATGCATATTAGAATTTTACAAAATGGAAAGAGGAGTGGACTAGATTTTGGGTGTTGTTATTATTGTCCTTTTCTTGGTGCCTTGAGACCAAATTCTTTTGTGAGATTAATTGTCGTTATGGACACTGATTTCTTGTGCACTAATGTTTTGATCACCATTCTTTATATTTTCACTTACTAACTTCTTCATATTTAATCAAGAAAGGATGACAACATGGAGGGAAGGAGCAACTAGTTAATTCAGTCTTAGGTTACTGTGATCTGTTGAATGTTATGTAGTCAAACAACACAATGGCAATGTCTTTGAAGACTGTAATGGCTATCAAATCTTACCAAAGTCAAGCTGATGCATTAGTAAAGAACTATTTATTAGCAGACCATTTTGTCCCATTCACTTCTGTACTTGGAGGGATGCTTGCTTGTAAATTGGTACGTAGAACCACTTACCTCATGCCGGATATTAGAAGGAAACAATGCTGCCCATGTTTAATGCTTCTCTTCAAACAGGGAACATTTTCTTACCATTTAATCTTTCCGATTTCTTATTTTTCCTCCTGCAGGTTTATGATCTCACTCAATTAGTTAGCAATTTTTATTTTAAAAGTTATCTTGGTCTTACAAAAATTCAACGAGTCGAGTGGAATAACCGGTGAGTCCATATTGTTTATTGTCCATTTCCTCCGTAATCTATTTAGTCGACTGTTGTGGCCATTACTGATATTCAAACTAAACTTGACAGCGGCATGTCCACTTTTCATGCAATCTATATCTCAATCATGTCATTGTACTTCGTTTTCTGGTCAGATCTCTTCTCTGACCAGCGTCATCCTGGCCTTGTTACCTTTCAAAGTTCAACATTGTCTACTTTCATATTGGGGGTAAGCTTTCTATTAGCTAATCTTAAATGAATATCAGCTGCCTTGAAATTCCTTATTTCCTGTTTTCCTCTCATCAAATAGCTAAGTTCGTAACATTTTATGCACCCATCATAACCAAACTGATAACTTCTGGTGTAACTAACTAACTAACTAATTATTTAGCAGCAGTTTTTGGTTATCAATACCCATTACGGTTTTTTCACCTCAAGGACAAGGTAAAATTCAGGAAATTGAGCCCATATTTTTTATGGCTCCCAATTAGAATTTGATTTTCATTTATTCTTGGAGTGGACGTGAAGTTCAGTTTTACTAGGGGGTAACTGTAAGAAAAGGTCATCCTCCTGGGACTATCTCAGGTTGGAAAAGCAATTTAAAGTTCTGGCTTGGTTTGTTCGCAAGTTCTTGGAAATTTGTGGTATACCAATAGCTACATACTTTTACTGGGAGTTGGGAAACATGAAATACTGGATGAGAAGTTGTTTTAGATAACTGAAGTTTATTAACAGCGTGTAAACAGTGAACAATAAGGGAAGGTGCCAAAATGTTTTGGGCCCAACCCAACTTCTTTGTGTATGTGTTTCTGAAGAAAACTAATGATAAGGTCACATATGAAAAGACTAAGTCACAACCCAACGTTTGCTATTAGCAGTTGGCTTTCATCTATTCTATTGTCCTACATGTACTTAGTTATCCAAAATGTCGTTAAGAACTCATCAATGCGTGGAACAGGGGTAGGTTGTGATAATGTAAAAAGGTGGATGTGGCCAATCATGCACAATATGGAAGAGGGTTGAAGTAATTCCCAAATTATCATTGTGCCATAAAGACTAAAAAAACACCTCAGGCTTCCTAGGAAACTTATACTCCAAATCAAAAGGTTAGCATTAGCCCATGAAAAGAGAGATGCATCCTACGGTTGTCTTGTAATACCAAATCAAAAGGTTAGCATTAGCTCACACTCTCCTATTTGTCTGTTAGCAACACTCTTGGGCCTTCAATATTAAAGAAACCAACTACATAGATCTTCAAGGAGACCTCCAACCATCATTCACTCTTTAGGATTTTCACTTCAAAATTTCTCGTGAAAACCCCATAACCAACAATTAAAGCTTTCATTTGAGCTAATCGTTACCCTTTTGAACGCATCACCACCACTAGAGGTTAATGTCTTGGTAAAGTTGGAAGGATCTTTGCTTTTACCGTTCTGGGAGGATTATTGTCTGGCTAAGTGTCCTTTCAGAATCTAATTTTGTCTTGTGTAAATACCAGTCTGTGTCTCTCAATCATCCTGAGCCTTGGTTTTTTATATCTGACAGACTGGAACTGTGAACTTCTAGTACATGTTGATGTGGTCCCTCTAATATAGTCTTCTTAAAATCAGGATCTTTTACTTATTTACATACAACTTCATTTTCTAAGCCAAGATTATCTTGGATGGGTTGGCATGCTTTATAAATAATTCTTCTTTATTTTTTTGTGAACATGAATCCGTTGACTCCAAACTGGAGAGCCATGCTTGATTTTATGTTTCTGTTTAAGGATAATGTCTATGATAGAGCCTTTAAGCTCTCTGTTGGGGCATTTGAGATTCTGTTCTGTTTGCCTTTAAATTTTCCTAAATCTTTACCAAAACCTTAATCACTTACTTTTTCCAGATTTCAGTTGGGTACTTCCTGGCAGATCTTGGATTGATTGTTTGGCTGTATCCTTCCTTAGGTGGGATGGAGTATGTAAGTACCTTCTCTACTGTTAGGCCTTCAAAATTGATACGAGTAGTGAGTAATTAGGAAACTCTGATGATAGGTTGTCCACCACACTCTTTCCGGACTAGCAGTGGCATACTCTGTTTTTTCTGGAGAAGGGCAACTCTATACTTATATGGTTCTCATTTCAGAGATTACAACTCCTGAGATTAATATGAGATGGTAGGTTTTCATTATTTTATTAACTTTTTATTTTAAAAGTTCTGCCTCTTTAATGTATTTCTTATTTAAATAAATGGTTTCTATTTCCACCTCTTAATTCTTTTATGATTTTTGAAGGTATCTTGATACTGCTGGTATGAAGAGGTCCTGTGCATATTTGATTAATGGTATTGTAATATTTTTTGCATGGCTGGTGAGTTATTATCTGAACCCTATCCTCATGTTCTCTGTTCCTTTCCCAAAAATGGCACAAGCATGACTGTCTGTATCTTATAATCCTATCAGATTCAATTTAACTTAATTGAACTTAAAGTACCATAGCACGTAGTACTATCCTAAATCTTCTATTATGATTGGATTTTCTTGTACGTGGATTGATTTTTACATGGTCGCTGATGGTGTTTAAAACAGATTGCTCGCATACTGCTGTTTGGATACACATTCTATCACGTTTACTTGCACTATGATCAGGTATCTTAAGATCAATTCTGCTTTTGCATGAAATGTTCACTAGTTAACAAAAATTTTCAGTTGTTATGTATTCATCTCATGCCAGCTTCTGGGAACCACTCAAAAAGGATGAAATATTTGTGATGTTCAACAGACTGGAAGCATAGAAGTATATAGTCTCTATGCTATCTCACTGAGTAATCTTTTTCTGTAGGTAATTAAGATGCATGTAATTGGATATCTTTTGGTATTTGGAGTGCCAACAGTGCTAGGTATGATGAACTTGATGTGGTTTGCAAAGATTGTCAAGGGATTAATGAAAACTATATCAAAGAGGTGACGAGATACGTTTTCTTCCTGTCGATATCTCTTCCCCTTCACCTTCTTGGTCTATTTCTTAACATCTGCACATGGGTTGAGGAGGGAAAGGAATTTGATGATGGTATGTAGTGTGTTGTAAATGGTTCAAAATAACTTAAACTTGTTGACATTTAGTCCTTTTCATCTTGTCAGATTTGTGTACCAATCC

mRNA sequence

ATGGCAATGTCTTTGAAGACTGTAATGGCTATCAAATCTTACCAAAGTCAAGCTGATGCATTAGTAAAGAACTATTTATTAGCAGACCATTTTGTCCCATTCACTTCTGTACTTGGAGGGATGCTTGCTTGTAAATTGGTTTATGATCTCACTCAATTAGTTAGCAATTTTTATTTTAAAAGTTATCTTGGTCTTACAAAAATTCAACGAGTCGAGTGGAATAACCGCGGCATGTCCACTTTTCATGCAATCTATATCTCAATCATGTCATTGTACTTCGTTTTCTGGTCAGATCTCTTCTCTGACCAGCGTCATCCTGGCCTTGTTACCTTTCAAAGTTCAACATTGTCTACTTTCATATTGGGGATTTCAGTTGGGTACTTCCTGGCAGATCTTGGATTGATTGTTTGGCTGTATCCTTCCTTAGGTGGGATGGAGTATGTTGTCCACCACACTCTTTCCGGACTAGCAGTGGCATACTCTGTTTTTTCTGGAGAAGGGCAACTCTATACTTATATGGTTCTCATTTCAGAGATTACAACTCCTGAGATTAATATGAGATGGTATCTTGATACTGCTGGTATGAAGAGGTCCTGTGCATATTTGATTAATGGTATTGTAATATTTTTTGCATGGCTGATTGCTCGCATACTGCTGTTTGGATACACATTCTATCACGTTTACTTGCACTATGATCAGGTAATTAAGATGCATGTAATTGGATATCTTTTGGTATTTGGAGTGCCAACAGTGCTAGGTATGATGAACTTGATGTGGTTTGCAAAGATTGTCAAGGGATTAATGAAAACTATATCAAAGAGGTGA

Coding sequence (CDS)

ATGGCAATGTCTTTGAAGACTGTAATGGCTATCAAATCTTACCAAAGTCAAGCTGATGCATTAGTAAAGAACTATTTATTAGCAGACCATTTTGTCCCATTCACTTCTGTACTTGGAGGGATGCTTGCTTGTAAATTGGTTTATGATCTCACTCAATTAGTTAGCAATTTTTATTTTAAAAGTTATCTTGGTCTTACAAAAATTCAACGAGTCGAGTGGAATAACCGCGGCATGTCCACTTTTCATGCAATCTATATCTCAATCATGTCATTGTACTTCGTTTTCTGGTCAGATCTCTTCTCTGACCAGCGTCATCCTGGCCTTGTTACCTTTCAAAGTTCAACATTGTCTACTTTCATATTGGGGATTTCAGTTGGGTACTTCCTGGCAGATCTTGGATTGATTGTTTGGCTGTATCCTTCCTTAGGTGGGATGGAGTATGTTGTCCACCACACTCTTTCCGGACTAGCAGTGGCATACTCTGTTTTTTCTGGAGAAGGGCAACTCTATACTTATATGGTTCTCATTTCAGAGATTACAACTCCTGAGATTAATATGAGATGGTATCTTGATACTGCTGGTATGAAGAGGTCCTGTGCATATTTGATTAATGGTATTGTAATATTTTTTGCATGGCTGATTGCTCGCATACTGCTGTTTGGATACACATTCTATCACGTTTACTTGCACTATGATCAGGTAATTAAGATGCATGTAATTGGATATCTTTTGGTATTTGGAGTGCCAACAGTGCTAGGTATGATGAACTTGATGTGGTTTGCAAAGATTGTCAAGGGATTAATGAAAACTATATCAAAGAGGTGA

Protein sequence

MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFKSYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFILGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEITTPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVIGYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR*

Homology

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BLAST of CsaV3_1G046450 vs. NCBI nr
Match: XP_011660315.1 (TLC domain-containing protein 4-B [Cucumis sativus] >XP_011660316.1 TLC domain-containing protein 4-B [Cucumis sativus] >KGN66887.1 hypothetical protein Csa_007557 [Cucumis sativus])

HSP 1 Score: 540.4 bits (1391), Expect = 8.9e-150
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 275
           GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 274

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BLAST of CsaV3_1G046450 vs. NCBI nr
Match: XP_008459089.1 (PREDICTED: transmembrane protein 56-like [Cucumis melo] >XP_016902371.1 PREDICTED: transmembrane protein 56-like [Cucumis melo] >KAA0043306.1 transmembrane protein 56-like [Cucumis melo var. makuwa] >TYK29370.1 transmembrane protein 56-like [Cucumis melo var. makuwa])

HSP 1 Score: 533.9 bits (1374), Expect = 8.3e-148
Identity = 270/274 (98.54%), Postives = 272/274 (99.27%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKL+YDLTQLVSNFYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLIYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRH GLVTFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHH+LSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 275
           GYLLVFGVPTVLGMMNLMWF KIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of CsaV3_1G046450 vs. NCBI nr
Match: XP_038894770.1 (TLC domain-containing protein 4-like [Benincasa hispida] >XP_038894771.1 TLC domain-containing protein 4-like [Benincasa hispida] >XP_038894772.1 TLC domain-containing protein 4-like [Benincasa hispida] >XP_038894773.1 TLC domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 528.5 bits (1360), Expect = 3.5e-146
Identity = 268/274 (97.81%), Postives = 270/274 (98.54%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLAD FVPFTSVLGGMLACKLVYDLTQLVSNFYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRGMST HAIYISIMSLYFVFWSDLFSDQRH GLVTFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHH+LSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 275
           GYLLVFGVPTVLGMMNLMWF KIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of CsaV3_1G046450 vs. NCBI nr
Match: XP_023543000.1 (transmembrane protein 56 [Cucurbita pepo subsp. pepo] >XP_023543001.1 transmembrane protein 56 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 519.2 bits (1336), Expect = 2.1e-143
Identity = 260/274 (94.89%), Postives = 268/274 (97.81%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLAD F+P+TSVLGGMLACKLVYDLTQLVSNFYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRG+ST HAIYISIMSLYFVFWSDLFSDQRH GL+TFQSS LSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSMLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI+WLYPSLGGMEYVVHH+LSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIIWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLING VIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 275
           GY+LVFGVPTVLGMMNLMWF KIVKGLMKTISKR
Sbjct: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of CsaV3_1G046450 vs. NCBI nr
Match: KAG6573446.1 (TLC domain-containing protein 4-B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 518.8 bits (1335), Expect = 2.8e-143
Identity = 259/274 (94.53%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLAD F+P+TSVLGGMLACKLVYDLTQLVSNFYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRG+ST HAIYISIMSLYFVFWSDLFSDQRH GL+TFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI+WLYPSLGGMEYVVHH+LSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIIWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLING VIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 275
           GY+LVFGVPT+LG+MNLMWF KIVKGLMKTISKR
Sbjct: 241 GYILVFGVPTMLGIMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of CsaV3_1G046450 vs. ExPASy Swiss-Prot
Match: Q6PGS5 (TLC domain-containing protein 4-B OS=Xenopus laevis OX=8355 GN=tlcd4-b PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.1e-15
Identity = 61/215 (28.37%), Postives = 110/215 (51.16%), Query Frame = 0


Query: 65  LTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFILGIS 124
           L+  Q++EWN+R +S+FHA+ +    LY + + D  +         +    +    + ++
Sbjct: 41  LSARQKIEWNSRTVSSFHALVVGCFCLYILVYDDAVNAD-----PVWGDPFMVKLNVAVT 100

Query: 125 VGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQL--YTYMVLISEITTP 184
            GY ++DL LI++ +  +G   +V HH L+ L   Y V  GEG L  +    LI+E +TP
Sbjct: 101 SGYLISDLLLIIYYWKEIGDKYFVTHH-LAALYACYYVL-GEGMLPYFGNFRLIAEFSTP 160

Query: 185 EINMRWYLDTAG-MKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHY-DQVIKMHVI 244
            +N RW+ +  G  K S   ++NG+++  ++ I RI +    +  V+  +  +      +
Sbjct: 161 FVNQRWFFEVLGYSKYSLPNMVNGVLMTISFFIVRIAVIPIYYGRVFSTFGTEAFHRLGL 220

Query: 245 GYLLVFGVPTV-LGMMNLMWFAKIVKGLMKTISKR 275
           G    + + +V L +MN+MW  KI KG  K +  R
Sbjct: 221 GAQCAWIISSVSLDIMNVMWMIKIAKGCYKVLYHR 248

[Close]

BLAST of CsaV3_1G046450 vs. ExPASy Swiss-Prot
Match: Q8CGF5 (TLC domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tlcd4 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.1e-15
Identity = 60/215 (27.91%), Postives = 112/215 (52.09%), Query Frame = 0


Query: 62  YLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFIL 121
           Y  L+  +++EWN+R +ST H++ + I  LY  F+ +        G  T+ +  ++T   
Sbjct: 51  YNSLSIDKKIEWNSRVVSTCHSLLVGIFGLYLFFFDEATITDPLWGDPTYVNINIAT--- 110

Query: 122 GISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLY-TYMVLISEIT 181
             + GY ++DL +I++ +  +G   +++HH  +GL   Y V +     Y     L++E++
Sbjct: 111 --ASGYLISDLLIILFNWKVIGDKFFIIHH-CAGLTAYYFVLTTGALAYIANFRLLAELS 170

Query: 182 TPEINMRWYLDTAGM-KRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHY--DQVIKM 241
           +P +N RW+ +     K S A +INGI++   + I RI+     ++ +Y  Y  +  I+ 
Sbjct: 171 SPFVNQRWFFEALKYPKFSKANVINGILMTVVFFIVRIISIPPMYFFLYSVYGTEPYIRF 230

Query: 242 HVIGYLLVFGVPTVLGMMNLMWFAKIVKGLMKTIS 273
             +   +      +L +MN+MW  KI KG +K IS
Sbjct: 231 GFVIQSVWIVTCVILDVMNIMWMIKITKGCIKVIS 259

[Close]

BLAST of CsaV3_1G046450 vs. ExPASy Swiss-Prot
Match: Q96MV1 (TLC domain-containing protein 4 OS=Homo sapiens OX=9606 GN=TLCD4 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.7e-15
Identity = 65/229 (28.38%), Postives = 113/229 (49.34%), Query Frame = 0


Query: 57  FYFKSYLGLTKI----------QRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHP 116
           FYF SY    K+          +++EWN+R +ST H++ + I  LY   +     D+   
Sbjct: 23  FYFVSYWFSAKVSPGFNSLSFKKKIEWNSRVVSTCHSLVVGIFGLYIFLF-----DEATK 82

Query: 117 GLVTFQSSTLSTFILGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGE 176
               +   +L+   + I+ GY ++DL +I+  +  +G   +++HH  S  A    + +G 
Sbjct: 83  ADPLWGGPSLANVNIAIASGYLISDLSIIILYWKVIGDKFFIMHHCASLYAYYLVLKNGV 142

Query: 177 GQLYTYMVLISEITTPEINMRWYLDTAGM-KRSCAYLINGIVIFFAWLIARI--LLFGYT 236
                   L++E+++P +N RW+ +     K S A +INGI++   + I RI  +L  Y 
Sbjct: 143 LAYIGNFRLLAELSSPFVNQRWFFEALKYPKFSKAIVINGILMTVVFFIVRIASMLPHYG 202

Query: 237 FYHVYLHYDQVIKMHVIGYLLVFGVPTVLGMMNLMWFAKIVKGLMKTIS 273
           F +     +  I++ V+  L       VL +MN+MW  KI KG +K IS
Sbjct: 203 FMYSVYGTEPYIRLGVLIQLSWVISCVVLDVMNVMWMIKISKGCIKVIS 246

[Close]

BLAST of CsaV3_1G046450 vs. ExPASy Swiss-Prot
Match: Q550S9 (TLC domain-containing protein 4 B OS=Dictyostelium discoideum OX=44689 GN=tlcd4b PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.9e-12
Identity = 58/223 (26.01%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 50  LTQLVSNFYFKSYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLV 109
           L +++   + K+ +G  + +R+EW NR +ST +AI  S +S+Y +++++   +       
Sbjct: 26  LPKIIEIIFKKNNIGFYERKRIEWPNRIISTVNAIVTSALSIYCLYYNEWIVNSLR---- 85

Query: 110 TFQSSTLSTFILGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQL 169
              +S +S FI      YF+ D  +  +    L     ++HHT++ L+  +    G    
Sbjct: 86  --STSEMSYFIFKFITYYFIYDFIISSYYSKYLFTWGNLLHHTIALLSFTFLGGKGLAHH 145

Query: 170 YTYMVLISEITTPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYL 229
                  +EITTP IN+R++L    +K    Y+ING++IF  +++ R+     T + V  
Sbjct: 146 LLLSYTFTEITTPLINLRFFLLDLNLKNHPLYVINGLLIFVGFVLFRVFYTSATMFDVIF 205

Query: 230 ---HYDQVIKMHVIGYLLVFGVPTVLGMMNLMWFAKIVKGLMK 270
              HY  +    +I + + F  P +  ++NL W   I K + K
Sbjct: 206 NQPHY-SIETDPLIPFFINFVYPAIT-LLNLYWTFYISKSIFK 240

[Close]

BLAST of CsaV3_1G046450 vs. ExPASy Swiss-Prot
Match: Q5XIY2 (TLC domain-containing protein 4-B OS=Danio rerio OX=7955 GN=tlcd4b PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-11
Identity = 56/240 (23.33%), Postives = 116/240 (48.33%), Query Frame = 0


Query: 37  VLGGMLACKLVYD-LTQLVSNFYFKSYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVF 96
           V G  +  +L +  ++ ++S+ + + Y  L   +  +WN+R +ST HA+ + +  LY ++
Sbjct: 9   VAGSFVGFQLFFSCVSPVLSSNFTQGYGKLPPNKLNDWNSRLVSTVHALIVGLFCLYILW 68

Query: 97  WSDLFSDQRHPGLVTFQSSTLSTFILGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSG 156
           + D  ++        +    L    + I+ GY   DL L+   + ++G + +V HH  + 
Sbjct: 69  YDDAVNED-----PVWGDPNLVKLNVAITCGYLFYDLLLLACNWSTMGDVFFVCHHLAAL 128

Query: 157 LAVAYSVFSGEGQLYTYMVLISEITTPEINMRWYLDTAGMKRSCAYLI-NGIVIFFAWLI 216
            A  Y +  G    +    LISE++TP +N RW+ +     R+   ++ NGI +   + +
Sbjct: 129 YAYGYVLTRGVLPYFANFRLISELSTPFVNQRWFFEALAYPRTHQLVVANGIAMAVVFFL 188

Query: 217 ARILLFGYTFYHVY-LHYDQVIKMHVIGYLLVFGVPTV-LGMMNLMWFAKIVKGLMKTIS 273
            RI +    +  V+ + Y    +   +   + + +  V L ++N++W  KI +G  K I+
Sbjct: 189 VRIAVMPPYWAKVFGIIYSPTFEKLGLAIQVAWIISCVCLDILNIIWMYKIARGCYKVIT 243

[Close]

BLAST of CsaV3_1G046450 vs. ExPASy TrEMBL
Match: A0A0A0M188 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G704090 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 4.3e-150
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 275
           GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 274

[Close]

BLAST of CsaV3_1G046450 vs. ExPASy TrEMBL
Match: A0A1S4E2B6 (transmembrane protein 56-like OS=Cucumis melo OX=3656 GN=LOC103498304 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.0e-148
Identity = 270/274 (98.54%), Postives = 272/274 (99.27%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKL+YDLTQLVSNFYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLIYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRH GLVTFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHH+LSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 275
           GYLLVFGVPTVLGMMNLMWF KIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of CsaV3_1G046450 vs. ExPASy TrEMBL
Match: A0A5D3E1H6 (Transmembrane protein 56-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00960 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.0e-148
Identity = 270/274 (98.54%), Postives = 272/274 (99.27%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKL+YDLTQLVSNFYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLIYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRH GLVTFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHH+LSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 275
           GYLLVFGVPTVLGMMNLMWF KIVKGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of CsaV3_1G046450 vs. ExPASy TrEMBL
Match: A0A6J1K6A0 (transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111490462 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.5e-142
Identity = 259/274 (94.53%), Postives = 268/274 (97.81%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMSLKTVMAIKSYQSQADALVKNYLLAD F+P+TSVLGGMLACKLVYDLTQLVSNFYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADRFIPYTSVLGGMLACKLVYDLTQLVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRG+ST HAIYISIMSLYFVFWSDLFSDQRH GL+TFQSSTLSTFI
Sbjct: 61  SYLGLTKIQRVEWNNRGVSTIHAIYISIMSLYFVFWSDLFSDQRHAGLLTFQSSTLSTFI 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLI++LYPSLGGMEYVVHH+LSGLAVAYSV SGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIIFLYPSLGGMEYVVHHSLSGLAVAYSVLSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLING VIFFAWL+ARILLFGYTFYHVYLHYDQVIKMHVI
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGFVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHVI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 275
           GY+LVFGVPTVLGMMNLMWF KIVKGLMKTISKR
Sbjct: 241 GYILVFGVPTVLGMMNLMWFGKIVKGLMKTISKR 274

[Close]

BLAST of CsaV3_1G046450 vs. ExPASy TrEMBL
Match: A0A6J1KGK7 (transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111495071 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.5e-142
Identity = 258/274 (94.16%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MAMSLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFK 60
           MAMSLKTVMAIKSYQSQADALV+NYLLAD  +P+TSVLGG+LACKLVYDLTQ+VSNFYFK
Sbjct: 1   MAMSLKTVMAIKSYQSQADALVENYLLADRLIPYTSVLGGILACKLVYDLTQVVSNFYFK 60

Query: 61  SYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFI 120
           SYLGLTKIQRVEWNNRGMST HAIYISIMSLYFVFWSDLFSDQRH GLVTFQSSTLSTF+
Sbjct: 61  SYLGLTKIQRVEWNNRGMSTIHAIYISIMSLYFVFWSDLFSDQRHAGLVTFQSSTLSTFV 120

Query: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEIT 180
           LGISVGYFLADLGLIVWLYPSLGGMEYVVHH+LSGLAVAYSVFSGEGQLYTYMVLISEIT
Sbjct: 121 LGISVGYFLADLGLIVWLYPSLGGMEYVVHHSLSGLAVAYSVFSGEGQLYTYMVLISEIT 180

Query: 181 TPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVI 240
           TPEINMRWYLDTAGMKRSCAYLING+VIFFAWL+ARILLFGYTFYHVYLHYDQVIKMH I
Sbjct: 181 TPEINMRWYLDTAGMKRSCAYLINGVVIFFAWLVARILLFGYTFYHVYLHYDQVIKMHAI 240

Query: 241 GYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 275
           GYLLVFGVPTVLGMMNLMWF KI KGLMKTISKR
Sbjct: 241 GYLLVFGVPTVLGMMNLMWFGKIGKGLMKTISKR 274

[Close]

BLAST of CsaV3_1G046450 vs. TAIR 10
Match: AT1G31300.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 404.1 bits (1037), Expect = 9.2e-113
Identity = 195/271 (71.96%), Postives = 235/271 (86.72%), Query Frame = 0


Query: 4   SLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFKSYL 63
           SL+T+ AIKSY  QA  LVKNYLLAD F+P+TSVL G+  CK+VYDL   +SN + K+Y+
Sbjct: 5   SLQTIGAIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYI 64

Query: 64  GLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFILGI 123
            LTKIQR+EWNNRG+ST HAI+IS MSLYFVFWSDLFSD+ H  LV F+SS LS+  LGI
Sbjct: 65  ILTKIQRIEWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGI 124

Query: 124 SVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEITTPE 183
           S+GYFLADLG+I W YPSLGG+EY+VHH+LSG+AVAYS+FSGEGQLYTYMVLISEITTPE
Sbjct: 125 SIGYFLADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPE 184

Query: 184 INMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVIGYL 243
           IN+RWYLDTAGMK+S AY++NG+ IF AWL+ARILLF Y FYHVYLHY+QV++MH+ GY+
Sbjct: 185 INLRWYLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYV 244

Query: 244 LVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 275
           LVFGVP  LG+MNL+WF KIV+G+ KT++KR
Sbjct: 245 LVFGVPAALGVMNLIWFGKIVRGVKKTLAKR 275

[Close]

BLAST of CsaV3_1G046450 vs. TAIR 10
Match: AT1G31300.2 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 404.1 bits (1037), Expect = 9.2e-113
Identity = 195/271 (71.96%), Postives = 235/271 (86.72%), Query Frame = 0


Query: 4   SLKTVMAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFKSYL 63
           SL+T+ AIKSY  QA  LVKNYLLAD F+P+TSVL G+  CK+VYDL   +SN + K+Y+
Sbjct: 5   SLQTIGAIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYI 64

Query: 64  GLTKIQRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRHPGLVTFQSSTLSTFILGI 123
            LTKIQR+EWNNRG+ST HAI+IS MSLYFVFWSDLFSD+ H  LV F+SS LS+  LGI
Sbjct: 65  ILTKIQRIEWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGI 124

Query: 124 SVGYFLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEITTPE 183
           S+GYFLADLG+I W YPSLGG+EY+VHH+LSG+AVAYS+FSGEGQLYTYMVLISEITTPE
Sbjct: 125 SIGYFLADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPE 184

Query: 184 INMRWYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVIGYL 243
           IN+RWYLDTAGMK+S AY++NG+ IF AWL+ARILLF Y FYHVYLHY+QV++MH+ GY+
Sbjct: 185 INLRWYLDTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYV 244

Query: 244 LVFGVPTVLGMMNLMWFAKIVKGLMKTISKR 275
           LVFGVP  LG+MNL+WF KIV+G+ KT++KR
Sbjct: 245 LVFGVPAALGVMNLIWFGKIVRGVKKTLAKR 275

[Close]

BLAST of CsaV3_1G046450 vs. TAIR 10
Match: AT4G19645.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 382.1 bits (980), Expect = 3.8e-106
Identity = 191/267 (71.54%), Postives = 223/267 (83.52%), Query Frame = 0


Query: 9   MAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFKSYLGLTKI 68
           M IKSYQ+QA+  V++YLLAD F+P+TSVL G+  CKLVYDLT+L S+ + KSY  LTKI
Sbjct: 1   MEIKSYQNQAEYFVEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKI 60

Query: 69  QRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRH-PGLVTFQSSTLSTFILGISVGY 128
           +R+EWNNRG+ST HAI+IS M+LYF F+SDLFSDQR    L  F++S LSTF LG+SVGY
Sbjct: 61  KRIEWNNRGISTVHAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGY 120

Query: 129 FLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEITTPEINMR 188
           FLADLG+I WLYPSLGG EY++HH LSG AVAYS+FSGE QLYTYMVLISE+TTPEIN+R
Sbjct: 121 FLADLGMIFWLYPSLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLR 180

Query: 189 WYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVIGYLLVFG 248
           WYLD AG+KRS AYL+NG+ IFFAWL ARILLF Y FYHVY HYDQVI+MH  GYLLVF 
Sbjct: 181 WYLDIAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFV 240

Query: 249 VPTVLGMMNLMWFAKIVKGLMKTISKR 275
           VP  L +MNL+WF KIVKGL KT+ KR
Sbjct: 241 VPISLSVMNLIWFGKIVKGLKKTLEKR 267

[Close]

BLAST of CsaV3_1G046450 vs. TAIR 10
Match: AT4G19645.2 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 382.1 bits (980), Expect = 3.8e-106
Identity = 191/267 (71.54%), Postives = 223/267 (83.52%), Query Frame = 0


Query: 9   MAIKSYQSQADALVKNYLLADHFVPFTSVLGGMLACKLVYDLTQLVSNFYFKSYLGLTKI 68
           M IKSYQ+QA+  V++YLLAD F+P+TSVL G+  CKLVYDLT+L S+ + KSY  LTKI
Sbjct: 1   MEIKSYQNQAEYFVEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKI 60

Query: 69  QRVEWNNRGMSTFHAIYISIMSLYFVFWSDLFSDQRH-PGLVTFQSSTLSTFILGISVGY 128
           +R+EWNNRG+ST HAI+IS M+LYF F+SDLFSDQR    L  F++S LSTF LG+SVGY
Sbjct: 61  KRIEWNNRGISTVHAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGY 120

Query: 129 FLADLGLIVWLYPSLGGMEYVVHHTLSGLAVAYSVFSGEGQLYTYMVLISEITTPEINMR 188
           FLADLG+I WLYPSLGG EY++HH LSG AVAYS+FSGE QLYTYMVLISE+TTPEIN+R
Sbjct: 121 FLADLGMIFWLYPSLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPEINLR 180

Query: 189 WYLDTAGMKRSCAYLINGIVIFFAWLIARILLFGYTFYHVYLHYDQVIKMHVIGYLLVFG 248
           WYLD AG+KRS AYL+NG+ IFFAWL ARILLF Y FYHVY HYDQVI+MH  GYLLVF 
Sbjct: 181 WYLDIAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFV 240

Query: 249 VPTVLGMMNLMWFAKIVKGLMKTISKR 275
           VP  L +MNL+WF KIVKGL KT+ KR
Sbjct: 241 VPISLSVMNLIWFGKIVKGLKKTLEKR 267

[Close]

BLAST of CsaV3_1G046450 vs. TAIR 10
Match: AT4G10360.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 248.1 bits (632), Expect = 8.5e-66
Identity = 120/238 (50.42%), Postives = 165/238 (69.33%), Query Frame = 0


Query: 36  SVLGGMLACKLVYDLTQLVSNFYFKSYLGLTKIQRVEWNNRGMSTFHAIYISIMSLYFVF 95
           S+  G L CK+VYDLT+ +S   F  Y  L    R+EWNNRG STFHA++ S+ S+YF+ 
Sbjct: 20  SICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNRGFSTFHAVFTSVASIYFLV 79

Query: 96  WSDLFSDQRHPGLVTFQSSTLSTFILGISVGYFLADLGLIVWLYPSLGGMEYVVHHTLSG 155
            SD F +  H   V   ++ LS  ++GIS+GYFLADL +I W +P+LGG+EYV HH LS 
Sbjct: 80  ISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIFWYFPTLGGIEYVFHHFLSM 139

Query: 156 LAVAYSVFSGEGQLYTYMVLISEITTPEINMRWYLDTAGMKRSCAYLINGIVIFFAWLIA 215
            A+  SV SG+ Q Y ++VL+SE TTP +N+RWYLD +G K S AY +NGI +F  WL+A
Sbjct: 140 FAIILSVTSGQSQFYIFLVLLSEATTPFVNLRWYLDNSGQKGSKAYTLNGIALFLGWLVA 199

Query: 216 RILLFGYTFYHVYLHYDQVIKMHVIGYLLVFGVPTVLGMMNLMWFAKIVKGLMKTISK 274
           R+LLF + F H+YLH+ QV ++  +G+  +  +P  L +MNL+WF KI KGL+KT+SK
Sbjct: 200 RVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMNLLWFWKITKGLIKTLSK 257

The following BLAST results are available for this feature:

BLAST of CsaV3_1G046450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011660315.1	8.9e-150	100.00	TLC domain-containing protein 4-B [Cucumis sativus] >XP_011660316.1 TLC domain-c...	[more]
XP_008459089.1	8.3e-148	98.54	PREDICTED: transmembrane protein 56-like [Cucumis melo] >XP_016902371.1 PREDICTE...	[more]
XP_038894770.1	3.5e-146	97.81	TLC domain-containing protein 4-like [Benincasa hispida] >XP_038894771.1 TLC dom...	[more]
XP_023543000.1	2.1e-143	94.89	transmembrane protein 56 [Cucurbita pepo subsp. pepo] >XP_023543001.1 transmembr...	[more]
KAG6573446.1	2.8e-143	94.53	TLC domain-containing protein 4-B, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsaV3_1G046450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PGS5	5.1e-15	28.37	TLC domain-containing protein 4-B OS=Xenopus laevis OX=8355 GN=tlcd4-b PE=2 SV=1	[more]
Q8CGF5	5.1e-15	27.91	TLC domain-containing protein 4 OS=Mus musculus OX=10090 GN=Tlcd4 PE=2 SV=1	[more]
Q96MV1	8.7e-15	28.38	TLC domain-containing protein 4 OS=Homo sapiens OX=9606 GN=TLCD4 PE=1 SV=1	[more]
Q550S9	6.9e-12	26.01	TLC domain-containing protein 4 B OS=Dictyostelium discoideum OX=44689 GN=tlcd4b...	[more]
Q5XIY2	4.5e-11	23.33	TLC domain-containing protein 4-B OS=Danio rerio OX=7955 GN=tlcd4b PE=2 SV=1	[more]

BLAST of CsaV3_1G046450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M188	4.3e-150	100.00	TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G704090 PE=4 SV...	[more]
A0A1S4E2B6	4.0e-148	98.54	transmembrane protein 56-like OS=Cucumis melo OX=3656 GN=LOC103498304 PE=4 SV=1	[more]
A0A5D3E1H6	4.0e-148	98.54	Transmembrane protein 56-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1K6A0	1.5e-142	94.53	transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111490462 PE=4 S...	[more]
A0A6J1KGK7	1.5e-142	94.16	transmembrane protein 56-like OS=Cucurbita maxima OX=3661 GN=LOC111495071 PE=4 S...	[more]

BLAST of CsaV3_1G046450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31300.1	9.2e-113	71.96	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT1G31300.2	9.2e-113	71.96	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G19645.1	3.8e-106	71.54	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G19645.2	3.8e-106	71.54	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G10360.1	8.5e-66	50.42	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 68..272 e-value: 2.3E-37 score: 140.1
IPR006634	TRAM/LAG1/CLN8 homology domain	PFAM	PF03798	TRAM_LAG1_CLN8	coord: 72..265 e-value: 9.4E-31 score: 107.1
IPR006634	TRAM/LAG1/CLN8 homology domain	PROSITE	PS50922	TLC	coord: 68..272 score: 33.04517
None	No IPR available	PANTHER	PTHR13439	CT120 PROTEIN	coord: 6..274
None	No IPR available	PANTHER	PTHR13439:SF62	OS01G0768200 PROTEIN	coord: 6..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G046450.1	CsaV3_1G046450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane