Homology
BLAST of CsaV3_1G015490 vs. NCBI nr
Match:
XP_004139516.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sativus] >KGN64994.1 hypothetical protein Csa_022775 [Cucumis sativus])
HSP 1 Score: 1414.1 bits (3659), Expect = 0.0e+00
Identity = 704/704 (100.00%), Postives = 704/704 (100.00%), Query Frame = 0
Query: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE
Sbjct: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
Query: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS
Sbjct: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of CsaV3_1G015490 vs. NCBI nr
Match:
XP_008464281.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis melo] >KAA0042345.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK15469.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1361.7 bits (3523), Expect = 0.0e+00
Identity = 674/704 (95.74%), Postives = 691/704 (98.15%), Query Frame = 0
Query: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
MAFQLC+SPPTFFT HH LSNSLTPQRKTTLSNSSPLFKL+PIPRHS PFLQITN+SLQE
Sbjct: 1 MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
Query: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
H+PQ+T NTIPS DEISKY D+KSGSSS SSVWVNPRSPRASKLRKQSYEARYASL+R+S
Sbjct: 61 HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120
Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
ESLDS NPCEVDVADVLKVIGNNILE+DA++VLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAE+LFEEM+NRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420
Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSC GKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
RTFNQLIELGLTPDDRFCGCLLNVITQTPK E+ KLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of CsaV3_1G015490 vs. NCBI nr
Match:
XP_038877791.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa hispida])
HSP 1 Score: 1321.2 bits (3418), Expect = 0.0e+00
Identity = 654/704 (92.90%), Postives = 678/704 (96.31%), Query Frame = 0
Query: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
MAFQLC+SP TFFT+HH LSNSLT QRKTTL NSS LFKL+PIPRHSKPFLQITNVSLQE
Sbjct: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
Query: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
+APQ+T N PS DEISKYPD KS SSS SSVWVNPRSPRASKLRKQSYEARYASL R+S
Sbjct: 61 YAPQETHNPSPSNDEISKYPDGKSSSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120
Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
ESLDS NPC+ DVADVLK IG+NIL++DA++VLNNMSNSQTALLALRYFQD+LKSSKQ I
Sbjct: 121 ESLDSCNPCQEDVADVLKEIGSNILQQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAEKLFEEM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYV EAVE+FQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVYEAVEVFQDMKSSGT 420
Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSC GKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
RTF++LIELGLTPDDRFCGCLLNVITQTPK EL KLIDCVVRANPKLGFVV+LL+GEQDK
Sbjct: 481 RTFSRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVKLLMGEQDK 540
Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQ+YKDLQSRS
Sbjct: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQLYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
PTQWSLYLKGLSLGA LTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAGLTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of CsaV3_1G015490 vs. NCBI nr
Match:
XP_022142513.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica charantia])
HSP 1 Score: 1244.6 bits (3219), Expect = 0.0e+00
Identity = 618/704 (87.78%), Postives = 652/704 (92.61%), Query Frame = 0
Query: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
MAFQLC+SP TFF++HH LSNSL Q + TL SS FKL+P P HSK L+ITNVSLQE
Sbjct: 1 MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60
Query: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
+A Q+ QN IP+ DE SKYPD KS SSS SSVWVNPRSPRASKLR QSYEARYASL R+S
Sbjct: 61 YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120
Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
ESLDS NPCE DVADVLK +G+NILE+DA+ VLNNMSNS TALLAL+ FQ +LKSSK+ I
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
YNVTLKV RK RDMEGAEKLF+EM+ RGVKPDNVTFST+ISCARLCSLP+KAVEWFEKM
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFST+IKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIF+DMKSSG
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420
Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSC GKVSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGK KRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKGKRVDDVV 480
Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
RTF++L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RAN KLG+VV+LLLGEQDK
Sbjct: 481 RTFDRLVELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANSKLGYVVKLLLGEQDK 540
Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EG+ RTEASEL SVVSADVRKAYCNCLIDLCVNLDLL+KACELLDLGLTLQIY LQS S
Sbjct: 541 EGDLRTEASELLSVVSADVRKAYCNCLIDLCVNLDLLEKACELLDLGLTLQIYTGLQSTS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
PTQWSL+LKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLHLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 704
BLAST of CsaV3_1G015490 vs. NCBI nr
Match:
KAG6583722.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1230.3 bits (3182), Expect = 0.0e+00
Identity = 613/705 (86.95%), Postives = 653/705 (92.62%), Query Frame = 0
Query: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTL-SNSSPLFKLSPIPRHSKPFLQITNVSLQ 60
MAFQL + P TFFT+H NSLT KTTL +SS +FKL+PIP HSKPFLQITNVS Q
Sbjct: 1 MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSSSRVFKLNPIPYHSKPFLQITNVSQQ 60
Query: 61 EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRV 120
E+APQ+T+N PS DEISK+PD KSGSSS +SVWVNP SPRASKLRKQSYEARYASL ++
Sbjct: 61 EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120
Query: 121 SESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQT 180
SESLDS NPCE DVADVLK I + ILE+DAI VLNNMSNSQTALL LRYFQD+LKSSKQ
Sbjct: 121 SESLDSCNPCEDDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQA 180
Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEK 240
+FYNVTLKVFRKCRD EGAEKLF+EM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEK
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
Query: 241 MPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
MPSFDCNPD++TYS MIDAYGRAGNVDMAFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300
Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
YDGCLNVYEEMKA+GIKPNL IYN LL AMGRAKRPWQIKTIYKEM KNGFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360
Query: 361 LLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSG 420
LLRAY RARY ED ++VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+E+F+DMKSSG
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420
Query: 421 TCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
TCSPDSWTFSSMITIYSC G VSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGKAKRVDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
Query: 481 VRTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD 540
VRTF++L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RANPKLGFVV+LLLGE+D
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540
Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
EG+FRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELLDLGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600
Query: 601 SPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
SPTQWSLYLKGLSLGAALTALHVWI DLTK L+SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660
Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701
BLAST of CsaV3_1G015490 vs. ExPASy Swiss-Prot
Match:
Q8GWE0 (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3)
HSP 1 Score: 920.6 bits (2378), Expect = 1.1e-266
Identity = 453/702 (64.53%), Postives = 561/702 (79.91%), Query Frame = 0
Query: 5 LCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQEHAPQ 64
LC SP + + L N L+ K+T + + + HS+ LQ T+VS+QE PQ
Sbjct: 6 LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65
Query: 65 DTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVSESLD 124
++ + D P ++S S VWVNP+SPRAS+LR++SY++RY+SLI+++ESLD
Sbjct: 66 SEKSKLVDVDLPIPEP-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125
Query: 125 SSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTIFYNV 184
+ P E DV DV+ G + E+DA++ LNNM+N +TA L L + +K S++ I YNV
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185
Query: 185 TLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMPSFD 244
T+KVFRK +D+E +EKLF+EM+ RG+KPDN TF+TIISCAR +P +AVEWFEKM SF
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 245
Query: 245 CNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL 304
C PD+VT + MIDAYGRAGNVDMA SLYDRARTE WRID TFST+I+I+GV+GNYDGCL
Sbjct: 246 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 305
Query: 305 NVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 364
N+YEEMKA+G+KPNLVIYN L+D+MGRAKRPWQ K IYK++I NGF+P+W+TYA+L+RAY
Sbjct: 306 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 365
Query: 365 GRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPD 424
GRARYG+DAL +Y+EMKEKGL L VILYNTLL+MCAD YV+EA EIFQDMK+ TC PD
Sbjct: 366 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 425
Query: 425 SWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 484
SWTFSS+IT+Y+C G+VSEAE L M EAGF+P +FVLTS+IQCYGKAK+VDDVVRTF+
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485
Query: 485 QLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD-KEGN 544
Q++ELG+TPDDRFCGCLLNV+TQTP E+GKLI CV +A PKLG VV++L+ EQ+ +EG
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545
Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQ 604
F+ EASEL + +DV+KAY NCLIDLCVNL+ L++ACE+L LGL IY LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605
Query: 605 WSLYLKGLSLGAALTALHVWIKDLTK-VLESGEELPPLLGINTGHGKHKYSDKGLASVFE 664
WSL+LK LSLGAALTALHVW+ DL++ LESGEE PPLLGINTGHGKHKYSDKGLA+VFE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665
Query: 665 SHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
SHLKELNAPFHEAP+KVGWFLTT VAAK+WLESR S V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702
BLAST of CsaV3_1G015490 vs. ExPASy Swiss-Prot
Match:
Q10PZ4 (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1)
HSP 1 Score: 714.5 bits (1843), Expect = 1.2e-204
Identity = 369/671 (54.99%), Postives = 471/671 (70.19%), Query Frame = 0
Query: 40 LSPIPRHSKPFLQITNVSLQEHAPQDTQNTIPSADEISKYPDSKSGSSSNSS--VWVNPR 99
LS P++ P VS+Q+ P P +D + G SSN+S VWVNP
Sbjct: 17 LSFQPKNPSPSPATARVSVQDPPP-------PPSD-----ANPSPGRSSNTSRYVWVNPN 76
Query: 100 SPRASKL-RKQSYEARYASLIRVSESLDSSNPCEVDVADVLK-VIGNNILERDAILVLNN 159
SPRA+ L R ++ R A L + +L + E VA L+ E+DA++VLN
Sbjct: 77 SPRAAGLARARAGSGRRARLAAAAAALAACEAGEAPVAAALEAAFPEPPSEQDAVIVLNT 136
Query: 160 MSNSQTA-LLALRYFQDMLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDN 219
S A +LAL +F + K+ I YNV LK RK R AE L+EEM+ GV+PDN
Sbjct: 137 TSARPAAVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLREGVQPDN 196
Query: 220 VTFSTIISCARLCSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDR 279
TFST+ISCAR C +P KAVEWFEKMP F C+PD +TYS +IDAYGRAG+ + A LYDR
Sbjct: 197 ATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETALRLYDR 256
Query: 280 ARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKR 339
AR E W++DP +T+I++H +GN+DG LNV+EEMKA G+KPNLV+YN +LDAMGRA R
Sbjct: 257 ARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGRAMR 316
Query: 340 PWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNT 399
PW +KTI++E++ P+ ATY LL AY RARYGEDA+ VY+ MK++ + ++V+LYN
Sbjct: 317 PWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVLYNM 376
Query: 400 LLAMCADVGYVNEAVEIFQDMKSS--GTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMV 459
LL+MCAD+GYV EA EIF+DMK+S PDSW++SSM+T+YSC G V+ AE +LN+MV
Sbjct: 377 LLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILNEMV 436
Query: 460 EAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKGE 519
EAGF PNIF+LTSLI+CYGKA R DDVVR+F L +LG+TPDDRFCGCLL V TP E
Sbjct: 437 EAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLTVAAGTPADE 496
Query: 520 LGKLIDCVVRANPKLGFVVELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCV 579
LGK+I C+ R++ +LG VV LL+ R A EL VR YCNCL+DL V
Sbjct: 497 LGKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVRMPYCNCLMDLAV 556
Query: 580 NLDLLDKACELLDLGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKVLE 639
NL ++KAC LLD+ L L IY ++Q+R+ TQWSL+L+GLS+GAALT LHVW+ DL L+
Sbjct: 557 NLSQMEKACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTLHVWMSDLYAALQ 616
Query: 640 SGEELPPLLGINTGHGKHKYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSW 699
+G+ELPPLLGI+TG GK+ YS KGLA+VFESHLKEL+APFHEAP+K GWFLTT VAA+ W
Sbjct: 617 AGDELPPLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAGWFLTTSVAARHW 675
Query: 700 LESRSSPELVA 704
LE++ S ELVA
Sbjct: 677 LETKKSAELVA 675
BLAST of CsaV3_1G015490 vs. ExPASy Swiss-Prot
Match:
B4F8Z1 (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1)
HSP 1 Score: 709.1 bits (1829), Expect = 4.8e-203
Identity = 376/708 (53.11%), Postives = 485/708 (68.50%), Query Frame = 0
Query: 5 LCYSPPTFFTE--HHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQEHA 64
LC SP + H +S S P+ + SP+ H VS+QE
Sbjct: 6 LCRSPSSLLPSWPHRPISASFNPKNPS-----------SPVAAH---------VSVQETP 65
Query: 65 PQDTQNTIPSADEISKYPDSKSGSSSNSS-VWVNPRSPRASKL-RKQSYEARYASLIRVS 124
PQ PS S ++ SSSN+ +WVNP SPRA+ + R ++ R A L +
Sbjct: 66 PQPQD---PSPPSDSNPNGTRPSSSSNTRFLWVNPNSPRAADVARARAGSGRRARLASAA 125
Query: 125 ESLDSSNPCEVDVADVLK-VIGNNILERDAILVLNN--MSNSQTALLALRYFQDMLKSSK 184
+L + E V L+ E+DA++VLN + ++TA+LALR+F K K
Sbjct: 126 AALGACETTESAVEAALQAAFPEPPSEQDAVIVLNTAAATRAETAVLALRWFLGNAKVRK 185
Query: 185 QTIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWF 244
+ I YNV LK+ RK R E L+ EM+ GV+PDN TFST+ISCAR C L SKAVEWF
Sbjct: 186 KVILYNVVLKLLRKKRLWSETEALWAEMLRDGVQPDNATFSTVISCARACGLHSKAVEWF 245
Query: 245 EKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVA 304
+KMP F C+PD +TYS +IDAYG AGN + A LYDRAR E W++DP ST+IK+H +
Sbjct: 246 DKMPEFGCSPDMLTYSAVIDAYGHAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHSTS 305
Query: 305 GNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATY 364
GN+DG LNV+EEMKAIG++PNLV+YN +LDAMGRA RPW +KTI++EM+ PS ATY
Sbjct: 306 GNFDGALNVFEEMKAIGVRPNLVVYNTMLDAMGRALRPWVVKTIHREMVDQQVQPSRATY 365
Query: 365 ASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKS 424
LL AY RARYGEDA+ VY+ MK++ + ++V+LYN LL+MCAD+GYV+EA EIF+DMK+
Sbjct: 366 CCLLHAYTRARYGEDAMAVYRLMKDEAMGIDVMLYNMLLSMCADIGYVDEAEEIFRDMKA 425
Query: 425 S--GTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKR 484
S PDSW++SSM+T+YS V AE +LN+MVEAGF PNIFVLTSLI+CYGK R
Sbjct: 426 SMGAHSKPDSWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIFVLTSLIRCYGKVGR 485
Query: 485 VDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLL 544
DDVVR+F L +LG+ PDDRFCGCLL+V TP ELGK+I C+ R+N +LG VV+LL+
Sbjct: 486 TDDVVRSFGMLQDLGIIPDDRFCGCLLSVAANTPAEELGKVISCIERSNVQLGAVVKLLV 545
Query: 545 GEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKD 604
E +FR A EL V+ YCNCL+DLCVNL+ ++KAC LLD L IY +
Sbjct: 546 DRSSSE-SFREAARELLRSSRGVVKMPYCNCLMDLCVNLNQMEKACALLDAAQQLGIYAN 605
Query: 605 LQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEE-LPPLLGINTGHGKHKYSD 664
+Q+R+ TQWSL+L+GLS+GAALT LHVW+ DL L++G E LPPLLGI+TG GK+ YSD
Sbjct: 606 IQTRTQTQWSLHLRGLSVGAALTTLHVWMNDLYTSLQTGNEGLPPLLGIHTGQGKNTYSD 665
Query: 665 KGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELV 703
+GLA++FE+HLKEL+APFHEAP+K GWFLTT VAAK WLES+++ ELV
Sbjct: 666 RGLAAMFEAHLKELDAPFHEAPDKAGWFLTTNVAAKQWLESKAASELV 689
BLAST of CsaV3_1G015490 vs. ExPASy Swiss-Prot
Match:
Q9LS25 (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1)
HSP 1 Score: 472.2 bits (1214), Expect = 1.0e-131
Identity = 268/709 (37.80%), Postives = 408/709 (57.55%), Query Frame = 0
Query: 2 AFQLCYSPPTFFTEHH--FLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQ 61
A +C++P T+ H FL SL Q ++ N S P +P T +
Sbjct: 8 AIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLKQPKTLEEEPITTKTPSLSE 67
Query: 62 EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQ-------SYEAR 121
+ P +I P SVWVNP P+ S L Q SY +
Sbjct: 68 QLKPLSATTLRQEQTQILSKP---------KSVWVNPTRPKRSVLSLQRQKRSAYSYNPQ 127
Query: 122 YASLIRVSESLDSSNPCE-VDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQD 181
L + L+SS E + +L I + +A+LVLN++ Q + +
Sbjct: 128 IKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKS 187
Query: 182 MLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPS 241
+TIFYNVT+K R R + E++ EM+ GV+ DN+T+STII+CA+ C+L +
Sbjct: 188 KSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYN 247
Query: 242 KAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMI 301
KA+EWFE+M PD+VTYS ++D Y ++G V+ SLY+RA W+ D FS +
Sbjct: 248 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 307
Query: 302 KIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFS 361
K+ G AG+YDG V +EMK++ +KPN+V+YN LL+AMGRA +P ++++ EM++ G +
Sbjct: 308 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT 367
Query: 362 PSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEI 421
P+ T +L++ YG+AR+ DAL +++EMK K ++ ILYNTLL MCAD+G EA +
Sbjct: 368 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 427
Query: 422 FQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYG 481
F DMK S C PD++++++M+ IY GGK +A E+ +M++AG N+ T L+QC G
Sbjct: 428 FNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLG 487
Query: 482 KAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKGE-LGKLIDCVVRANPKLGFV 541
KAKR+DDVV F+ I+ G+ PDDR CGCLL+V+ E K++ C+ RAN KL
Sbjct: 488 KAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTF 547
Query: 542 VELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTL 601
V L++ E+ + + E + + + R+ +CNCLID+C + ++A ELL LG
Sbjct: 548 VNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLF 607
Query: 602 QIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKH 661
+Y L +++ +WSL ++ LS+GAA TAL W++ L +++ EELP L TG G H
Sbjct: 608 GLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTH 667
Query: 662 KYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSP 700
++S +GLA+ F HL++L+APF ++ ++ G F+ TK SWLES+ P
Sbjct: 668 RFS-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705
BLAST of CsaV3_1G015490 vs. ExPASy Swiss-Prot
Match:
Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)
HSP 1 Score: 203.4 bits (516), Expect = 8.6e-51
Identity = 148/567 (26.10%), Postives = 272/567 (47.97%), Query Frame = 0
Query: 167 RYFQDMLKSSKQ--TIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCA 226
++F +M ++ Q I +N L V + E A LF+EM NR ++ D +++T++
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 227 RLCSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDP 286
A E +MP P+ V+YST+ID + +AG D A +L+ R +D
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 287 ATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKE 346
+++T++ I+ G + L++ EM ++GIK ++V YN LL G+ + ++K ++ E
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 347 MIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGY 406
M + P+ TY++L+ Y + ++A+ +++E K GL+ +V+LY+ L+ G
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 407 VNEAVEIFQDMKSSGTCSPDSWTFSSMITI------------YSCGGKVSEAEEMLNDMV 466
V AV + +M G SP+ T++S+I YS GG + + L+ +
Sbjct: 565 VGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 624
Query: 467 EAGFDPNIFVLTSLI---------QCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLN 526
E + I + L C + + ++ F ++ +L + P+ +LN
Sbjct: 625 ETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILN 684
Query: 527 VITQTPKGELGKLIDCVVRA--NPKLGFVVELLLGEQDKEGNFRTEASELFSVVS---AD 586
++ E ++ +R N G V LL+G+++ N +A LF V+
Sbjct: 685 ACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRE---NVWLQAQSLFDKVNEMDGS 744
Query: 587 VRKAYCNCLIDLCVNLDLLDKACELLDL-GLTLQIYKDLQSRSPTQWSLYLKGLSLGAAL 646
A+ N L D+ + + EL+ L G + Q+++++ S S L L +S GAA
Sbjct: 745 TASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVWENVWSDS----CLDLHLMSSGAAR 804
Query: 647 TALHVWIKDLTKVLESGEELPPLLGINTGHGKHK--YSDKGLASVFESHLKELNAPFHEA 703
+H W+ ++ ++ G ELP +L I TG GKH D L E L+ ++APFH +
Sbjct: 805 AMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLS 864
BLAST of CsaV3_1G015490 vs. ExPASy TrEMBL
Match:
A0A0A0LVP1 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV=1)
HSP 1 Score: 1414.1 bits (3659), Expect = 0.0e+00
Identity = 704/704 (100.00%), Postives = 704/704 (100.00%), Query Frame = 0
Query: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE
Sbjct: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
Query: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS
Sbjct: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of CsaV3_1G015490 vs. ExPASy TrEMBL
Match:
A0A5A7TLM5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00400 PE=3 SV=1)
HSP 1 Score: 1361.7 bits (3523), Expect = 0.0e+00
Identity = 674/704 (95.74%), Postives = 691/704 (98.15%), Query Frame = 0
Query: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
MAFQLC+SPPTFFT HH LSNSLTPQRKTTLSNSSPLFKL+PIPRHS PFLQITN+SLQE
Sbjct: 1 MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
Query: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
H+PQ+T NTIPS DEISKY D+KSGSSS SSVWVNPRSPRASKLRKQSYEARYASL+R+S
Sbjct: 61 HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120
Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
ESLDS NPCEVDVADVLKVIGNNILE+DA++VLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAE+LFEEM+NRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420
Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSC GKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
RTFNQLIELGLTPDDRFCGCLLNVITQTPK E+ KLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of CsaV3_1G015490 vs. ExPASy TrEMBL
Match:
A0A1S3CL39 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502208 PE=3 SV=1)
HSP 1 Score: 1361.7 bits (3523), Expect = 0.0e+00
Identity = 674/704 (95.74%), Postives = 691/704 (98.15%), Query Frame = 0
Query: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
MAFQLC+SPPTFFT HH LSNSLTPQRKTTLSNSSPLFKL+PIPRHS PFLQITN+SLQE
Sbjct: 1 MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
Query: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
H+PQ+T NTIPS DEISKY D+KSGSSS SSVWVNPRSPRASKLRKQSYEARYASL+R+S
Sbjct: 61 HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120
Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
ESLDS NPCEVDVADVLKVIGNNILE+DA++VLNNMSNSQTALLALRYFQDMLKSSKQTI
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAE+LFEEM+NRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420
Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSC GKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
RTFNQLIELGLTPDDRFCGCLLNVITQTPK E+ KLIDCVVRANPKLGFVVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of CsaV3_1G015490 vs. ExPASy TrEMBL
Match:
A0A6J1CNE5 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012613 PE=3 SV=1)
HSP 1 Score: 1244.6 bits (3219), Expect = 0.0e+00
Identity = 618/704 (87.78%), Postives = 652/704 (92.61%), Query Frame = 0
Query: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
MAFQLC+SP TFF++HH LSNSL Q + TL SS FKL+P P HSK L+ITNVSLQE
Sbjct: 1 MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60
Query: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
+A Q+ QN IP+ DE SKYPD KS SSS SSVWVNPRSPRASKLR QSYEARYASL R+S
Sbjct: 61 YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120
Query: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
ESLDS NPCE DVADVLK +G+NILE+DA+ VLNNMSNS TALLAL+ FQ +LKSSK+ I
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
YNVTLKV RK RDMEGAEKLF+EM+ RGVKPDNVTFST+ISCARLCSLP+KAVEWFEKM
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYS MIDAYGRAGNVDMAFSLYDRARTENWRIDPATFST+IKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
LRAYGRARYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIF+DMKSSG
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420
Query: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSC GKVSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGK KRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKGKRVDDVV 480
Query: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
RTF++L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RAN KLG+VV+LLLGEQDK
Sbjct: 481 RTFDRLVELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANSKLGYVVKLLLGEQDK 540
Query: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EG+ RTEASEL SVVSADVRKAYCNCLIDLCVNLDLL+KACELLDLGLTLQIY LQS S
Sbjct: 541 EGDLRTEASELLSVVSADVRKAYCNCLIDLCVNLDLLEKACELLDLGLTLQIYTGLQSTS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
PTQWSL+LKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV
Sbjct: 601 PTQWSLHLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 704
BLAST of CsaV3_1G015490 vs. ExPASy TrEMBL
Match:
A0A6J1EHV4 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434309 PE=3 SV=1)
HSP 1 Score: 1229.5 bits (3180), Expect = 0.0e+00
Identity = 613/705 (86.95%), Postives = 652/705 (92.48%), Query Frame = 0
Query: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNS-SPLFKLSPIPRHSKPFLQITNVSLQ 60
MAFQL + P TFFT+H NSLT KTTL S S +FKL+PIP HSKPFLQITNVS Q
Sbjct: 1 MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQ 60
Query: 61 EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRV 120
E+APQ+T+N PS DEISK+PD KSGSSS +SVWVNP SPRASKLRKQSYEARYASL ++
Sbjct: 61 EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120
Query: 121 SESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQT 180
SESLDS NPCEVDVADVLK I + ILE+DAI VLNNMSNSQTALL RYFQD+LKSSKQ
Sbjct: 121 SESLDSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQA 180
Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEK 240
+FYNVTLKVFRKCRD EGAEKLF+EM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEK
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
Query: 241 MPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
MPSFDCNPD++TYS MIDAYGRAGNVDMAFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300
Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
YDGCLNVYEEMKA+GIKPNL IYN LL AMGRAKRPWQIKTIYKEM KNGFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360
Query: 361 LLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSG 420
LLRAY RARY ED ++VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+E+F+DMKSSG
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420
Query: 421 TCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
TCSPDSWTFSSMITIYSC G VSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGKAKRVDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
Query: 481 VRTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD 540
VRTF++L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RANPKLGFVV+LLLGE+D
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540
Query: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
EG+FRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELLDLGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600
Query: 601 SPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
SPTQWSLYLKGLSLGAALTALHVWI DLTK L+SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660
Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701
BLAST of CsaV3_1G015490 vs. TAIR 10
Match:
AT4G16390.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 920.6 bits (2378), Expect = 7.5e-268
Identity = 453/702 (64.53%), Postives = 561/702 (79.91%), Query Frame = 0
Query: 5 LCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQEHAPQ 64
LC SP + + L N L+ K+T + + + HS+ LQ T+VS+QE PQ
Sbjct: 6 LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65
Query: 65 DTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVSESLD 124
++ + D P ++S S VWVNP+SPRAS+LR++SY++RY+SLI+++ESLD
Sbjct: 66 SEKSKLVDVDLPIPEP-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125
Query: 125 SSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTIFYNV 184
+ P E DV DV+ G + E+DA++ LNNM+N +TA L L + +K S++ I YNV
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185
Query: 185 TLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKMPSFD 244
T+KVFRK +D+E +EKLF+EM+ RG+KPDN TF+TIISCAR +P +AVEWFEKM SF
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 245
Query: 245 CNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL 304
C PD+VT + MIDAYGRAGNVDMA SLYDRARTE WRID TFST+I+I+GV+GNYDGCL
Sbjct: 246 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 305
Query: 305 NVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 364
N+YEEMKA+G+KPNLVIYN L+D+MGRAKRPWQ K IYK++I NGF+P+W+TYA+L+RAY
Sbjct: 306 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 365
Query: 365 GRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPD 424
GRARYG+DAL +Y+EMKEKGL L VILYNTLL+MCAD YV+EA EIFQDMK+ TC PD
Sbjct: 366 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 425
Query: 425 SWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 484
SWTFSS+IT+Y+C G+VSEAE L M EAGF+P +FVLTS+IQCYGKAK+VDDVVRTF+
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485
Query: 485 QLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD-KEGN 544
Q++ELG+TPDDRFCGCLLNV+TQTP E+GKLI CV +A PKLG VV++L+ EQ+ +EG
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545
Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQ 604
F+ EASEL + +DV+KAY NCLIDLCVNL+ L++ACE+L LGL IY LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605
Query: 605 WSLYLKGLSLGAALTALHVWIKDLTK-VLESGEELPPLLGINTGHGKHKYSDKGLASVFE 664
WSL+LK LSLGAALTALHVW+ DL++ LESGEE PPLLGINTGHGKHKYSDKGLA+VFE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665
Query: 665 SHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
SHLKELNAPFHEAP+KVGWFLTT VAAK+WLESR S V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702
BLAST of CsaV3_1G015490 vs. TAIR 10
Match:
AT5G46580.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 472.2 bits (1214), Expect = 7.1e-133
Identity = 268/709 (37.80%), Postives = 408/709 (57.55%), Query Frame = 0
Query: 2 AFQLCYSPPTFFTEHH--FLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQ 61
A +C++P T+ H FL SL Q ++ N S P +P T +
Sbjct: 8 AIDVCFNPQNSDTKKHSLFLKPSLFRQSRSRKLNISCSSLKQPKTLEEEPITTKTPSLSE 67
Query: 62 EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQ-------SYEAR 121
+ P +I P SVWVNP P+ S L Q SY +
Sbjct: 68 QLKPLSATTLRQEQTQILSKP---------KSVWVNPTRPKRSVLSLQRQKRSAYSYNPQ 127
Query: 122 YASLIRVSESLDSSNPCE-VDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQD 181
L + L+SS E + +L I + +A+LVLN++ Q + +
Sbjct: 128 IKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKS 187
Query: 182 MLKSSKQTIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPS 241
+TIFYNVT+K R R + E++ EM+ GV+ DN+T+STII+CA+ C+L +
Sbjct: 188 KSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYN 247
Query: 242 KAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMI 301
KA+EWFE+M PD+VTYS ++D Y ++G V+ SLY+RA W+ D FS +
Sbjct: 248 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 307
Query: 302 KIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFS 361
K+ G AG+YDG V +EMK++ +KPN+V+YN LL+AMGRA +P ++++ EM++ G +
Sbjct: 308 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT 367
Query: 362 PSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEI 421
P+ T +L++ YG+AR+ DAL +++EMK K ++ ILYNTLL MCAD+G EA +
Sbjct: 368 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 427
Query: 422 FQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYG 481
F DMK S C PD++++++M+ IY GGK +A E+ +M++AG N+ T L+QC G
Sbjct: 428 FNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLG 487
Query: 482 KAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQTPKGE-LGKLIDCVVRANPKLGFV 541
KAKR+DDVV F+ I+ G+ PDDR CGCLL+V+ E K++ C+ RAN KL
Sbjct: 488 KAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTF 547
Query: 542 VELLLGEQDKEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTL 601
V L++ E+ + + E + + + R+ +CNCLID+C + ++A ELL LG
Sbjct: 548 VNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLF 607
Query: 602 QIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKH 661
+Y L +++ +WSL ++ LS+GAA TAL W++ L +++ EELP L TG G H
Sbjct: 608 GLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTH 667
Query: 662 KYSDKGLASVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSP 700
++S +GLA+ F HL++L+APF ++ ++ G F+ TK SWLES+ P
Sbjct: 668 RFS-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705
BLAST of CsaV3_1G015490 vs. TAIR 10
Match:
AT2G31400.1 (genomes uncoupled 1 )
HSP 1 Score: 203.4 bits (516), Expect = 6.1e-52
Identity = 148/567 (26.10%), Postives = 272/567 (47.97%), Query Frame = 0
Query: 167 RYFQDMLKSSKQ--TIFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCA 226
++F +M ++ Q I +N L V + E A LF+EM NR ++ D +++T++
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 227 RLCSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDP 286
A E +MP P+ V+YST+ID + +AG D A +L+ R +D
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 287 ATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKE 346
+++T++ I+ G + L++ EM ++GIK ++V YN LL G+ + ++K ++ E
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 347 MIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGY 406
M + P+ TY++L+ Y + ++A+ +++E K GL+ +V+LY+ L+ G
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 407 VNEAVEIFQDMKSSGTCSPDSWTFSSMITI------------YSCGGKVSEAEEMLNDMV 466
V AV + +M G SP+ T++S+I YS GG + + L+ +
Sbjct: 565 VGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 624
Query: 467 EAGFDPNIFVLTSLI---------QCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLN 526
E + I + L C + + ++ F ++ +L + P+ +LN
Sbjct: 625 ETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILN 684
Query: 527 VITQTPKGELGKLIDCVVRA--NPKLGFVVELLLGEQDKEGNFRTEASELFSVVS---AD 586
++ E ++ +R N G V LL+G+++ N +A LF V+
Sbjct: 685 ACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRE---NVWLQAQSLFDKVNEMDGS 744
Query: 587 VRKAYCNCLIDLCVNLDLLDKACELLDL-GLTLQIYKDLQSRSPTQWSLYLKGLSLGAAL 646
A+ N L D+ + + EL+ L G + Q+++++ S S L L +S GAA
Sbjct: 745 TASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVWENVWSDS----CLDLHLMSSGAAR 804
Query: 647 TALHVWIKDLTKVLESGEELPPLLGINTGHGKHK--YSDKGLASVFESHLKELNAPFHEA 703
+H W+ ++ ++ G ELP +L I TG GKH D L E L+ ++APFH +
Sbjct: 805 AMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLS 864
BLAST of CsaV3_1G015490 vs. TAIR 10
Match:
AT1G74750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 166.4 bits (420), Expect = 8.3e-41
Identity = 113/495 (22.83%), Postives = 227/495 (45.86%), Query Frame = 0
Query: 209 GVKPDNVTFSTIISCARLCSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNVDMA 268
G K D T++T++ + + ++M C P+ VTY+ +I +YGRA + A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 269 FSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDA 328
+++++ + D T+ T+I IH AG D +++Y+ M+ G+ P+ Y+ +++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 329 MGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLN 388
+G+A ++ EM+ G +P+ T+ ++ + +AR E AL +Y++M+ G Q +
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 389 VILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEML 448
+ Y+ ++ + G++ EA +F +M+ PD + ++ ++ G V +A +
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNVDKAWQWY 593
Query: 449 NDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQT 508
M++AG PN+ SL+ + + R+ + ++ LGL P + LL+ T
Sbjct: 594 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDA 653
Query: 509 ----PKGELGKLIDCVVRANPKLGFVVELLLGEQDKEGNFRTEASELFSVVSADVR---K 568
G G+L+ V +P F++++ D + R S + ++ R +
Sbjct: 654 RSNFDMGFCGQLM--AVSGHPAHMFLLKMPPAGPDGQ-KVRDHVSNFLDFMHSEDRESKR 713
Query: 569 AYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKD-LQSRSPTQWSLYLKGLSLGAALTAL 628
+ ++D L ++A + ++ +Y D L+ +S + W + L +S G A+ AL
Sbjct: 714 GLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAVIAL 773
Query: 629 HVWIKDLTKVLESGEELPPLLGINTGHGKHK--YSDKGLASVFESHLKELNAPFHEAPEK 688
+ K + + P + I TG G+ + E L N PF
Sbjct: 774 SRTLAWFRKQMLVSGDCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFNFPFFTENGN 833
Query: 689 VGWFLTTKVAAKSWL 694
G F+ + K+WL
Sbjct: 834 SGCFVGSGEPLKNWL 844
BLAST of CsaV3_1G015490 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 164.9 bits (416), Expect = 2.4e-40
Identity = 100/350 (28.57%), Postives = 176/350 (50.29%), Query Frame = 0
Query: 164 LALRYFQDMLKSSK-QTIFYNVTLKVFRKCRDMEG----AEKLFEEMINRGVKPDNVTFS 223
LALR F +K Q++ N + + EG A +F + G D +++
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212
Query: 224 TIISCARLCSLPSKAVEWFEKMPSFDCNPDDVTYSTMIDAYGRAGNV-DMAFSLYDRART 283
++IS +AV F+KM C P +TY+ +++ +G+ G + SL ++ ++
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 284 ENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQ 343
+ D T++T+I + V+EEMKA G + V YN LLD G++ RP +
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 344 IKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLA 403
+ EM+ NGFSPS TY SL+ AY R ++A+ + +M EKG + +V Y TLL+
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 404 MCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFD 463
G V A+ IF++M+++G C P+ TF++ I +Y GK +E ++ +++ G
Sbjct: 393 GFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 452
Query: 464 PNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRFCGCLLNVITQ 508
P+I +L+ +G+ +V F ++ G P+ L++ ++
Sbjct: 453 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_004139516.1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sa... | [more] |
| XP_008464281.1 | 0.0e+00 | 95.74 | PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic ... | [more] |
| XP_038877791.1 | 0.0e+00 | 92.90 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa ... | [more] |
| XP_022142513.1 | 0.0e+00 | 87.78 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica ... | [more] |
| KAG6583722.1 | 0.0e+00 | 86.95 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q8GWE0 | 1.1e-266 | 64.53 | Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop... | [more] |
| Q10PZ4 | 1.2e-204 | 54.99 | Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza... | [more] |
| B4F8Z1 | 4.8e-203 | 53.11 | Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4... | [more] |
| Q9LS25 | 1.0e-131 | 37.80 | Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop... | [more] |
| Q9SIC9 | 8.6e-51 | 26.10 | Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LVP1 | 0.0e+00 | 100.00 | Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV... | [more] |
| A0A5A7TLM5 | 0.0e+00 | 95.74 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S3CL39 | 0.0e+00 | 95.74 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis ... | [more] |
| A0A6J1CNE5 | 0.0e+00 | 87.78 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordic... | [more] |
| A0A6J1EHV4 | 0.0e+00 | 86.95 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbit... | [more] |
