CsaV3_1G003770 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G003770
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Tegument protein VP16
Location	chr1: 2342078 .. 2343296 (-)
RNA-Seq Expression	CsaV3_1G003770
Synteny	CsaV3_1G003770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCTAAGTGCGTTTGAACCATACGAATTCACTATTTAAGGCTCAGATGTTGCTTCCTCCACTTCCCCGTCACCAATTCTCATTCCATGCTCTGTCTTACACTCTAAAACCTCCCGTCGTCGCTCTTCTTTCTTCCTTCTTCTCTAATGGAACCCTCTCTTGACTCCAGGAAGCGTCTTCGGGACGATTCCAACGACTCCCTCTTCAATTCTATTGGATCCAATTCCAAGTTCCTCCGACTTGAAAATCCGGCTGCCTCCAACTTCGATGCGCCGGTTTCACACTCGACCGATTCGTTTCACTCGCATCACACAATTCAGGAAGACCTGCTGAAGATTCTAGACGATACCGACGCTTCCATAGATCGGGAGGCGGGGATTCAAGATCTTGATTCGGTGATTAGAAGCTTCGAGAAGGAAATTGAAGTGCCGGTGACGGTGACGGTACCTGTTGTTCAACCTGAACTTGGATTTCTTTTAGAAGCGTCGGATGATGAATTAGGGCTTCCGCCTGCTGCTGGTGAGAAAGAGGAAATTGAAGAAGCGGAGTTTTCGGGTAGCGGTGGTGTGAAAGGGGGTTTAGGGTTCGAGGATGAAATTGTTTCGAATTACTGTTGGTTTGATAATTTGAGATGTGAGATTAAGGAATGGAGTACGGAAGAGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGTTTGATCATACGGATGTGGCGGCGGAATTGCCGACGGCGTATCGATCGGAGAGGATGCCGTGTTTATAATAGTTAATTGAACACACTTTGTTTTATTTGTATTTGTATTCGTAAGATGAAGAAACTAAAAACTTTGGGGAAAAAAAGAAAAGAAAATTGAATGTGTGGAATTTGTTCAAGAAATTACAAAATTACAAGGAGTAACAACAGAAAGAAAAGCATACAATCAATTAATTACACATATTGTTTTCCATGGGTCGGTTGATTCATCGATTTTACGTACACTCATAGTTAGTTTGAACTTACAAACTTAAGAGTTTAGAAAAATCACATGAACTATTTAGTGAGATACTTAAATTTGTGGGTGTGAATGTGACTTCACCATATAAATGGAAAGTTGGAGTAGTTTTGCTTAGTCCATATGTGGATATGGATTAGTTCAAGTAGTGATCAAACTCAATAAAATTGGCTATCTTTTCTTCCTTAGTTCTTGTACAAAATTAGACACTAAATTGATACCAATCTTA

mRNA sequence

ATGGAACCCTCTCTTGACTCCAGGAAGCGTCTTCGGGACGATTCCAACGACTCCCTCTTCAATTCTATTGGATCCAATTCCAAGTTCCTCCGACTTGAAAATCCGGCTGCCTCCAACTTCGATGCGCCGGTTTCACACTCGACCGATTCGTTTCACTCGCATCACACAATTCAGGAAGACCTGCTGAAGATTCTAGACGATACCGACGCTTCCATAGATCGGGAGGCGGGGATTCAAGATCTTGATTCGGTGATTAGAAGCTTCGAGAAGGAAATTGAAGTGCCGGTGACGGTGACGGTACCTGTTGTTCAACCTGAACTTGGATTTCTTTTAGAAGCGTCGGATGATGAATTAGGGCTTCCGCCTGCTGCTGGTGAGAAAGAGGAAATTGAAGAAGCGGAGTTTTCGGGTAGCGGTGGTGTGAAAGGGGGTTTAGGGTTCGAGGATGAAATTGTTTCGAATTACTGTTGGTTTGATAATTTGAGATGTGAGATTAAGGAATGGAGTACGGAAGAGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGTTTGATCATACGGATGTGGCGGCGGAATTGCCGACGGCGTATCGATCGGAGAGGATGCCGTGTTTATAA

Coding sequence (CDS)

ATGGAACCCTCTCTTGACTCCAGGAAGCGTCTTCGGGACGATTCCAACGACTCCCTCTTCAATTCTATTGGATCCAATTCCAAGTTCCTCCGACTTGAAAATCCGGCTGCCTCCAACTTCGATGCGCCGGTTTCACACTCGACCGATTCGTTTCACTCGCATCACACAATTCAGGAAGACCTGCTGAAGATTCTAGACGATACCGACGCTTCCATAGATCGGGAGGCGGGGATTCAAGATCTTGATTCGGTGATTAGAAGCTTCGAGAAGGAAATTGAAGTGCCGGTGACGGTGACGGTACCTGTTGTTCAACCTGAACTTGGATTTCTTTTAGAAGCGTCGGATGATGAATTAGGGCTTCCGCCTGCTGCTGGTGAGAAAGAGGAAATTGAAGAAGCGGAGTTTTCGGGTAGCGGTGGTGTGAAAGGGGGTTTAGGGTTCGAGGATGAAATTGTTTCGAATTACTGTTGGTTTGATAATTTGAGATGTGAGATTAAGGAATGGAGTACGGAAGAGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGTTTGATCATACGGATGTGGCGGCGGAATTGCCGACGGCGTATCGATCGGAGAGGATGCCGTGTTTATAA

Protein sequence

MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGLPPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALGGLFDHTDVAAELPTAYRSERMPCL*

Homology

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BLAST of CsaV3_1G003770 vs. NCBI nr
Match: KGN63814.1 (hypothetical protein Csa_013978 [Cucumis sativus])

HSP 1 Score: 404.8 bits (1039), Expect = 4.3e-109
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQED 60
           MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQED
Sbjct: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQED 60

Query: 61  LLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGL 120
           LLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGL
Sbjct: 61  LLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGL 120

Query: 121 PPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALG 180
           PPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALG
Sbjct: 121 PPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALG 180

Query: 181 GLFDHTDVAAELPTAYRSERMPCL 205
           GLFDHTDVAAELPTAYRSERMPCL
Sbjct: 181 GLFDHTDVAAELPTAYRSERMPCL 204

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BLAST of CsaV3_1G003770 vs. NCBI nr
Match: TYK28413.1 (uncharacterized protein E5676_scaffold629G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 359.0 bits (920), Expect = 2.7e-95
Identity = 189/205 (92.20%), Postives = 192/205 (93.66%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSN-DSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQE 60
           MEP +D+RKRLRDDSN DSLFNSIGS+SKFLRLENPA SNFDAPVS STDSF SHHTIQE
Sbjct: 21  MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPVSQSTDSFQSHHTIQE 80

Query: 61  DLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELG 120
           DLLKILDDTDASIDREA IQDLDSVIRSFEKEIEVP    VPVVQPELGFLLEASDDELG
Sbjct: 81  DLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVP----VPVVQPELGFLLEASDDELG 140

Query: 121 LPPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVAL 180
           LPP AGEKEEIEEAEFSGSGGVKG LGFEDEIVSNYCWFDNLRCEIKEWS EEEEEVVAL
Sbjct: 141 LPP-AGEKEEIEEAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWSPEEEEEVVAL 200

Query: 181 GGLFDHTDVAAELPTAYRSERMPCL 205
           GGLFDHTDVAAELPTAYRSERMPCL
Sbjct: 201 GGLFDHTDVAAELPTAYRSERMPCL 220

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BLAST of CsaV3_1G003770 vs. NCBI nr
Match: XP_008453684.1 (PREDICTED: uncharacterized protein LOC103494333 [Cucumis melo])

HSP 1 Score: 356.7 bits (914), Expect = 1.4e-94
Identity = 188/205 (91.71%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSN-DSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQE 60
           MEP +D+RKRLRDDSN DSLFNSIGS+SKFLRLENPA SNFDAPVS STDSF SHHTIQE
Sbjct: 1   MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPVSQSTDSFQSHHTIQE 60

Query: 61  DLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELG 120
           DLLKILDDTDASIDREA IQDLDSVIRSFEKEIEVP    VPVVQPELGFLLEASDDELG
Sbjct: 61  DLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVP----VPVVQPELGFLLEASDDELG 120

Query: 121 LPPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVAL 180
           LPP AGEKEEIEEAEFSGSGGVKG LGFEDEIVSNYCWFDNLRCEIKEW  EEEEEVVAL
Sbjct: 121 LPP-AGEKEEIEEAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWIPEEEEEVVAL 180

Query: 181 GGLFDHTDVAAELPTAYRSERMPCL 205
           GGLFDHTDVAAELPTAYRSERMPCL
Sbjct: 181 GGLFDHTDVAAELPTAYRSERMPCL 200

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BLAST of CsaV3_1G003770 vs. NCBI nr
Match: KAA0059746.1 (uncharacterized protein E6C27_scaffold34725G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 356.7 bits (914), Expect = 1.4e-94
Identity = 188/205 (91.71%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSN-DSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQE 60
           MEP +D+RKRLRDDSN DSLFNSIGS+SKFLRLENPA SNFDAPVS STDSF SHHTIQE
Sbjct: 21  MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPVSQSTDSFQSHHTIQE 80

Query: 61  DLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELG 120
           DLLKILDDTDASIDREA IQDLDSVIRSFEKEIEVP    VPVVQPELGFLLEASDDELG
Sbjct: 81  DLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVP----VPVVQPELGFLLEASDDELG 140

Query: 121 LPPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVAL 180
           LPP AGEKEEIEEAEFSGSGGVKG LGFEDEIVSNYCWFDNLRCEIKEW  EEEEEVVAL
Sbjct: 141 LPP-AGEKEEIEEAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWIPEEEEEVVAL 200

Query: 181 GGLFDHTDVAAELPTAYRSERMPCL 205
           GGLFDHTDVAAELPTAYRSERMPCL
Sbjct: 201 GGLFDHTDVAAELPTAYRSERMPCL 220

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BLAST of CsaV3_1G003770 vs. NCBI nr
Match: XP_038890344.1 (uncharacterized protein LOC120079943 [Benincasa hispida])

HSP 1 Score: 298.5 bits (763), Expect = 4.4e-77
Identity = 165/208 (79.33%), Postives = 173/208 (83.17%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDS----FHSHHT 60
           MEP +D+RKRL DDSNDSLFN IGSNSKFLRLEN A  NFDAPV+ S DS        H 
Sbjct: 1   MEPCVDTRKRLWDDSNDSLFNYIGSNSKFLRLENSADLNFDAPVAKSIDSSGLDSFQAHA 60

Query: 61  IQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDD 120
           IQEDLLKILDDT+ASIDRE+ I+DLDSVIRSFEKEIEVP    VPVVQPELGFLLEASDD
Sbjct: 61  IQEDLLKILDDTEASIDRESAIEDLDSVIRSFEKEIEVP----VPVVQPELGFLLEASDD 120

Query: 121 ELGLPPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEV 180
           ELGLPP AGEK EIE     GSGG+KG LGFEDE VSNYCWF+NLR EIKEWS E EEEV
Sbjct: 121 ELGLPP-AGEKGEIEGGNL-GSGGLKGILGFEDENVSNYCWFENLRSEIKEWSPEGEEEV 180

Query: 181 VALGGLFDHTDVAAELPTAYRSERMPCL 205
           VALGGLFDHTDVAAELPTAYRSE MPCL
Sbjct: 181 VALGGLFDHTDVAAELPTAYRSETMPCL 202

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BLAST of CsaV3_1G003770 vs. ExPASy TrEMBL
Match: A0A0A0LS21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.1e-109
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQED 60
           MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQED
Sbjct: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQED 60

Query: 61  LLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGL 120
           LLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGL
Sbjct: 61  LLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELGL 120

Query: 121 PPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALG 180
           PPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALG
Sbjct: 121 PPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVALG 180

Query: 181 GLFDHTDVAAELPTAYRSERMPCL 205
           GLFDHTDVAAELPTAYRSERMPCL
Sbjct: 181 GLFDHTDVAAELPTAYRSERMPCL 204

[Close]

BLAST of CsaV3_1G003770 vs. ExPASy TrEMBL
Match: A0A5D3DXI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00410 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.3e-95
Identity = 189/205 (92.20%), Postives = 192/205 (93.66%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSN-DSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQE 60
           MEP +D+RKRLRDDSN DSLFNSIGS+SKFLRLENPA SNFDAPVS STDSF SHHTIQE
Sbjct: 21  MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPVSQSTDSFQSHHTIQE 80

Query: 61  DLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELG 120
           DLLKILDDTDASIDREA IQDLDSVIRSFEKEIEVP    VPVVQPELGFLLEASDDELG
Sbjct: 81  DLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVP----VPVVQPELGFLLEASDDELG 140

Query: 121 LPPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVAL 180
           LPP AGEKEEIEEAEFSGSGGVKG LGFEDEIVSNYCWFDNLRCEIKEWS EEEEEVVAL
Sbjct: 141 LPP-AGEKEEIEEAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWSPEEEEEVVAL 200

Query: 181 GGLFDHTDVAAELPTAYRSERMPCL 205
           GGLFDHTDVAAELPTAYRSERMPCL
Sbjct: 201 GGLFDHTDVAAELPTAYRSERMPCL 220

[Close]

BLAST of CsaV3_1G003770 vs. ExPASy TrEMBL
Match: A0A5A7UZW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34725G00010 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.6e-95
Identity = 188/205 (91.71%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSN-DSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQE 60
           MEP +D+RKRLRDDSN DSLFNSIGS+SKFLRLENPA SNFDAPVS STDSF SHHTIQE
Sbjct: 21  MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPVSQSTDSFQSHHTIQE 80

Query: 61  DLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELG 120
           DLLKILDDTDASIDREA IQDLDSVIRSFEKEIEVP    VPVVQPELGFLLEASDDELG
Sbjct: 81  DLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVP----VPVVQPELGFLLEASDDELG 140

Query: 121 LPPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVAL 180
           LPP AGEKEEIEEAEFSGSGGVKG LGFEDEIVSNYCWFDNLRCEIKEW  EEEEEVVAL
Sbjct: 141 LPP-AGEKEEIEEAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWIPEEEEEVVAL 200

Query: 181 GGLFDHTDVAAELPTAYRSERMPCL 205
           GGLFDHTDVAAELPTAYRSERMPCL
Sbjct: 201 GGLFDHTDVAAELPTAYRSERMPCL 220

[Close]

BLAST of CsaV3_1G003770 vs. ExPASy TrEMBL
Match: A0A1S3BWV1 (uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.6e-95
Identity = 188/205 (91.71%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSN-DSLFNSIGSNSKFLRLENPAASNFDAPVSHSTDSFHSHHTIQE 60
           MEP +D+RKRLRDDSN DSLFNSIGS+SKFLRLENPA SNFDAPVS STDSF SHHTIQE
Sbjct: 1   MEPCVDTRKRLRDDSNDDSLFNSIGSSSKFLRLENPADSNFDAPVSQSTDSFQSHHTIQE 60

Query: 61  DLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEASDDELG 120
           DLLKILDDTDASIDREA IQDLDSVIRSFEKEIEVP    VPVVQPELGFLLEASDDELG
Sbjct: 61  DLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVP----VPVVQPELGFLLEASDDELG 120

Query: 121 LPPAAGEKEEIEEAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWSTEEEEEVVAL 180
           LPP AGEKEEIEEAEFSGSGGVKG LGFEDEIVSNYCWFDNLRCEIKEW  EEEEEVVAL
Sbjct: 121 LPP-AGEKEEIEEAEFSGSGGVKGVLGFEDEIVSNYCWFDNLRCEIKEWIPEEEEEVVAL 180

Query: 181 GGLFDHTDVAAELPTAYRSERMPCL 205
           GGLFDHTDVAAELPTAYRSERMPCL
Sbjct: 181 GGLFDHTDVAAELPTAYRSERMPCL 200

[Close]

BLAST of CsaV3_1G003770 vs. ExPASy TrEMBL
Match: A0A6J1E5H5 (uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC111429674 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.5e-62
Identity = 147/214 (68.69%), Postives = 162/214 (75.70%), Query Frame = 0


Query: 1   MEPSLDSRKRLRDDSNDSLFNSIGSNSKFLRLENPAASNFDAPV------SHSTDSFHSH 60
           ME  +DSRKRLRD+SNDSLFN IGSNSKF+RL++      DAP+      + S DSF + 
Sbjct: 1   MEACVDSRKRLRDESNDSLFNFIGSNSKFVRLDSANLDVDDAPIASVSSDAKSIDSFQA- 60

Query: 61  HTIQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVPVVQPELGFLLEAS 120
           + IQ+DLLKILDD DA IDRE+ IQDLDSVIRSFEKEI+VP    VP  QPELGFLLEAS
Sbjct: 61  NLIQDDLLKILDDVDAYIDRESEIQDLDSVIRSFEKEIQVP----VPSGQPELGFLLEAS 120

Query: 121 DDELGLPPAAGEKEEIE----EAEFSGSGGVKGGLGFEDEIVSNYCWFDNLRCEIKEWST 180
           DDELGLPP AGEKEE E     AEF GSG +KG LG EDE V NYCW +NLR E  EW+ 
Sbjct: 121 DDELGLPP-AGEKEETEAVNFAAEFLGSGDMKGILGLEDETVPNYCWLENLRSE-NEWNR 180

Query: 181 EEEEEVVALGGLFDHTDVAAELPTAYRSERMPCL 205
           EEEEEVV LGGLFDHTDVA EL  AYRSE MPCL
Sbjct: 181 EEEEEVVVLGGLFDHTDVATEL--AYRSETMPCL 205

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BLAST of CsaV3_1G003770 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12
Identity = 61/167 (36.53%), Postives = 82/167 (49.10%), Query Frame = 0


Query: 57  IQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVP------VVQPELGFL 116
           +++DL  +LDD+D     E   QDLDSV++SFE E+    T T          QP+LG+L
Sbjct: 37  LRDDLFDVLDDSDP----EPVSQDLDSVMKSFEDELSTVTTTTAQGSSTAGETQPDLGYL 96

Query: 117 LEASDDELGLPPAAG------EKEEIEEAEF-------SGSGGVKGGLGFEDEIVSNYCW 176
           LEASDDELGLPP          KEE+            S S G+    GFED  VSNY  
Sbjct: 97  LEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASSDSSGIDEIWGFEDH-VSNYGG 156

Query: 177 FDNLRCEIKEWSTEEEEEVVALGGLFDHTDVAAELPT--AYRSERMP 203
            D            +  + VA+ GLF+ +D   +     ++RSE +P
Sbjct: 157 LD------FGSGVGDGGDYVAVEGLFEFSDDCFDSGDLFSWRSESLP 192

[Close]

BLAST of CsaV3_1G003770 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 66.2 bits (160), Expect = 3.4e-11
Identity = 51/122 (41.80%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 57  IQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVP------VVQPELGFL 116
           +++DL  +LDD+D     E   QDLDSV++SFE E+    T T          QP+LG+L
Sbjct: 37  LRDDLFDVLDDSDP----EPVSQDLDSVMKSFEDELSTVTTTTAQGSSTAGETQPDLGYL 96

Query: 117 LEASDDELGLPPAAG------EKEEIEEAEF-------SGSGGVKGGLGFEDEIVSNYCW 160
           LEASDDELGLPP          KEE+            S S G+    GFED  VSNY  
Sbjct: 97  LEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASSDSSGIDEIWGFEDH-VSNYGG 153

[Close]

BLAST of CsaV3_1G003770 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 66.2 bits (160), Expect = 3.4e-11
Identity = 51/122 (41.80%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 57  IQEDLLKILDDTDASIDREAGIQDLDSVIRSFEKEIEVPVTVTVP------VVQPELGFL 116
           +++DL  +LDD+D     E   QDLDSV++SFE E+    T T          QP+LG+L
Sbjct: 37  LRDDLFDVLDDSDP----EPVSQDLDSVMKSFEDELSTVTTTTAQGSSTAGETQPDLGYL 96

Query: 117 LEASDDELGLPPAAG------EKEEIEEAEF-------SGSGGVKGGLGFEDEIVSNYCW 160
           LEASDDELGLPP          KEE+            S S G+    GFED  VSNY  
Sbjct: 97  LEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASSDSSGIDEIWGFEDH-VSNYGG 153

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BLAST of CsaV3_1G003770 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 6.6e-07
Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 60  DLLKILDDTDASIDREAGIQDLDSVIRSFEKEIE-VPVTVTVPVVQPELGFLLEASDDEL 119
           D+ ++ DD       +   QDLDSV++SFE E+      ++    QP+LG+L EASDDEL
Sbjct: 30  DVKRLRDDLFDDSGLDPVSQDLDSVMKSFENELSTTTAALSSGETQPDLGYLFEASDDEL 89

Query: 120 GLPP 123
           GLPP
Sbjct: 90  GLPP 93

The following BLAST results are available for this feature:

BLAST of CsaV3_1G003770 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63814.1	4.3e-109	100.00	hypothetical protein Csa_013978 [Cucumis sativus]	[more]
TYK28413.1	2.7e-95	92.20	uncharacterized protein E5676_scaffold629G00410 [Cucumis melo var. makuwa]	[more]
XP_008453684.1	1.4e-94	91.71	PREDICTED: uncharacterized protein LOC103494333 [Cucumis melo]	[more]
KAA0059746.1	1.4e-94	91.71	uncharacterized protein E6C27_scaffold34725G00010 [Cucumis melo var. makuwa]	[more]
XP_038890344.1	4.4e-77	79.33	uncharacterized protein LOC120079943 [Benincasa hispida]	[more]

BLAST of CsaV3_1G003770 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G003770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LS21	2.1e-109	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1	[more]
A0A5D3DXI3	1.3e-95	92.20	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UZW3	6.6e-95	91.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BWV1	6.6e-95	91.71	uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=...	[more]
A0A6J1E5H5	1.5e-62	68.69	uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC1114296...	[more]

BLAST of CsaV3_1G003770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13360.1	1.4e-12	36.53	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13360.2	3.4e-11	41.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13360.3	3.4e-11	41.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G25870.1	6.6e-07	45.31	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34539	T6J4.11 PROTEIN	coord: 2..204
None	No IPR available	PANTHER	PTHR34539:SF15	SUBFAMILY NOT NAMED	coord: 2..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G003770.1	CsaV3_1G003770.1	mRNA