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CsaV3_1G002730 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAACTGATATCAAACTGAATCATGAATGGTTCAACAATGGCGGGAATGAGGAAAAGGCCATTTCTTGGAAGTATGTTCGAAAAAGATCACTTTCAAATTCTTATATTTTATTGGTTTTGGTATATTAGTTTAATTTATTCAAAGGCTTCCTCTACTTTAACGCCAATTTCCATAATTGTTTTGTTTTGTCAAAAGCCTTCTTAATCCTCAAGTTGTTCCAATTCCTGCTGATTCTTTGGCCCAGGTCTTCCTTTGACTCTTTCCCTCTTTTAATTCCCTTCTTTCCTTCAAAACCCAGTTCAAGTCTTCGCTGGTTTATCAATTATACTCTTGATCGTCTTAGTTCTTTGATTCTGAAGGTACATGATCGCCCCTTTCTCTCTAATTTTATCTGGGTTTTCTATTGATTTCTTAATGCTTGTGGGTTTTATTTGAATTGAATGAGTGATGTCCCACTCGCTTTCTTGAGAAGTTTAATATTGTTTTGATTCTTATAATCTTTTTTTTTTTTCTTCTGTCAAATCCTATGCGATTTCTGAACTGATGATTTGGTTGATTCACCAATGCCTGCTTGCTTTTAGAGAAAACTGAGCTTGTGTAAAGAAAAGGGATAATTGGAGTTTTATTATTGATTTGTCTGTTGTGGGGTTTGGTATTAATGAACTGGCTATTTCAGGATTATCTCAGAGATGAATTTGGTTTTTGGAATATGTTTCATCAGGAACGGGGTTTTAGATTGCGTACTGTTTGATTAAATGACATGGTTTCTTGTGGAAATATGGTGTCCTCTTTAAGTTGTATTTGCTTGATTAACTTGATTTCATTACCAGAGATTATGAGTTTTTAGAACCCTTCTGATGTTCTTTTGCTGATTTGTGTGATCCATTCTTCTTTTTCATCAAATTCTTCACCAAGAACATTGTTTGTTTTTGCTTGCCTAATGTTTGATTAATTGTCATGCTTTCTTTTGGAAATACGATGTCCTGTTTAAGTTGTATTTGCCTGAATAACTTGATTTCATTACCACAGATTATGTGTTTTTAGAACCCTTTTGATCTTCTTATGCTGATTTGTGTAATCCATTTTTCTTTTTCTTGGAATTTTTCAACCAATTGTTTGACTCTTTGCTTGGTTCCAGGGTGGAATTTTGATCTTTATAAGCATTAGAATCATTCTCCTTGTCACGAAACGATCAGCTGAATTCAGCATTTGCATTTCCAGAAATGTCACCTTTTAGGAAATCCCCTATAAATGTTGGTAGGCACGGCTCAAGCCAACCTGCCAATTCTGCTCGTTCCAGTCCAAACCCAGTTAATTCAAATGATAATTTAGACAAGAAGCAAAAGCAGTCCTCAAGAATCACCTCTTCTCATCAGGCAACTGCAGCACCAAATCCCAAGTCAGCTCTTTTCGACGATCATCTTGAGAAAGGGACTGACTCATCTTCATATTCTTCTTCTTCAAGTTCATATTCATGGTCATCAAGAAACAGATACAAGAATGATTTCCGGGACTCAGGTGGGATTGAGAATCAAACAGTGGAGGAGTTGGAGAGTTATGCTGTTTATAAGGCTGAGGAGACAACTAACTCAGTCAACAACTGCCTGAAGATTGCTGAGGATATCAGAGAAGATGCAACCAAAACCTTAGTTGCCTTGCACCAACAGGGCGAGCAAATCACTCGAACCCATGTGGTCACTGCTGATATTGACAACGATCTTAGTCGGGTATGTGGAATGAAGTGACCGTTATATAAATCATGATCAATAACATGTTCGAGAGTTTTCAAAATGATTAAAAACACTTTTTCATGTTCAATAATCATTCGATTCATGTTTAGTTTACACTTTTAAGCATGGTTTTTTCATCCTATCAAGATTGCTTTTAAACGATTGAAAATAATCCTGCTTTGACTTGACTTGACTTGCTGAGAACCAGTGGATGCTTTTCCTTTCCTTAACCTCCTTTCTTGTTTTAGGACTCATTGACCTCTAACCTTGATTTCATCCTAAAGAACTTAGACATCACATAGAGGGTTATTTGGCTCATGGTTTTTGGTAGCCTAAGTTAAAGAAGCCTAAAGGTTTGCAGATTGTGGGTTCGTAGTTTGTCAAAAGTATGTATATGCTGTAAAGTTTGAGTTGTATGAAATTTACCAAGCCATGAATAAAGAAACCTATGTACTAACCGGTAAACCAAACATTCCAATTTGAGTTACACAAGTGTAACCGGTAAACCAAACTTTCCAATTTGAGTTACACAAGTCTAACCGGTAAACCAAACATTACCATCTTCATCTATGGATGCATTTTGTAAAGATGTTGAAATGTTTTTGGGCATTGCCATCAATATTTGTGATGTTGATTTCAGGGTGAGAAACTTCTAGGAAGTTTAGGAGGAATATTCTCTAAGACTTGGAAGCCAAAGAAAGGTCGTCAGATAACAGGCCCTGTTATCTTTGAAGGTAATATTTTTCAAATTTTGGCAGTATAATTAAGAAAAACAGAACTACCTCTTATAACTTCTTTTTCTTTGTTTTATGTCATAGTTTCTATGCATTTAAAAACAAATAAATAAGTAAAACTATACTATTATTGACGTTTATAAAAGATGAAAAAAAAAAAGAAATGGAAACACCTATGAAACACTTATGTTTGAATCAAAAAAGAAAAAAACATAAACAACTACCAAACGATCCATGAGTAACCTAACCACGATCTTAAATTATCCAAACTAAATTGAAGTCCTAATCTATAGAACAAGAAGCAACCTTTCCCACTAATCAGATGCATTAAGTTGATGGCCAATTAGTTTATCAAAAAATAACTATAGTATTTGATAAACAAACTTGATTTGGTTGTAGGGGATCATGCTGTTATAAGCAAAGGCAACCATTTGGAGCAAAGGGAGAAATTGGGGTTAAGTCGAGCACCAAACCCACGGTCCTCACGTGCCCCACATCCTGAGCCAACAAACTCACTTCAGAAAGTTGAGGTTTGTAGTTCTTTTCTGTTTGTTAAATACAACCATTATGAGTAGGAGTTGAGTCTCCAACCTCAGGGCAAAATAGAAGCATTTTTGCAATAATTTAACAAGAAATTTGTTTCTAATCAGGTGGAAAAGGTGAAACAAGACGATGCTCTATCAGATTTGAGCAACATATTGGGAGAACTTAAAGAAATGGCTGTTGATATGGGATCTGAACTAGACAAGTACGGTCTTATAGTCTTAGAAAATATGTTTACCAGAGTCGTTAATTTCTTGTTTTTGCGTAGAAGAAGAACAAATAAGTAATGAGGACGTTATGAAATAAGTTCAAAAGCTAATTTTCTTATTTGATTCTTTTATTTTTGTTTAACTTAGTGTGAATTAATCCTACTATTTCAGGCAAAATAAAGCTCTGGATCACTTGTTTGATGATGCTAACGAGGTCACAATTCGTGTCGATAATGCTAACCAGCGTGCTCGCCACCTGCTTAGAAAGTAGAACGCTTTGCAAGGTCTCGTCTCATTTTTACCATCAACCAATATGATGGTAATATGCTTGACTGGAATGGCTTTCCTTTTGATTTACAGTCTCTTCCTGTCTGTCTTACTTTCCTCCAAAAGCAAAAACATTTACTTTTTTTCCCCTCAAAACAGTTGTGAAATAGTTTGGTTCACTATGTAGTTTGTAGACAAATTACATGTTTTTTCTTCTACGATTCTCTTATGGTTTTTAATGGATTCCAAAATGGAAAAAAATACATTTGGAATCCCAATCTCTCTGTACTTTTACTTTGGTTCATTTTGATCAAATATGTTCATTTTGGACTACTTTGATACTCTTATAAAGTGATCATCTTAATCTCCTCTCATTTTCACTTTATTTCATTTAAGGTGATCGAAATGGTTAACCAAAACGAAATGAAATTAATATTATAATCATCAAAATGAAAGTATAAGTAAAATTTTGATAATATAATGATTAAAACGAATCGGAAAGAAAAACAAGCTATCGAATTAATCAAGATTCATAGAACAAGTTTTCAAGACTAAAATCTGTTGTTCCAATGGATTTTATCCATACAAAAAAAAAAAAAAAAATTGGAAAGGAGATCATATCAACAAATCAAAACGAATGAGAAGATCAGTGTAATCATGTTTTCATCATCACCAAATATTTCATATTTCATCCCACAGTCAAGGATTAATTACTCAAACGATTTATTAAATTCTTAGTAGAAAAGGTATGATCCGTGAAGCAGAAATAAACCCTTACTCACGAAATCTATCACAATAGAATTAGAATTACAATAAATTAAGGAAAAAGAGCTTCCGTATTCAGTTTATGCGATGAGCCTCCATGATGCTCTTTACCTTCGGCCCATAGAGGGAGTAAACGGCGGACTGTCTTTTAGCAACTTCAAGCTGAGCCTTGCCATCGGCATAGGCGGAAGAAATGGATGGAGGATCGGAAAGGTTTCGGTTATGGCGGAAGCCATCGACCGCGCGTCGTTTGGCGTACTCTCTGATGTTGTAATCGGAGAAGTGACGGGCTGTACGGATCAGAGAGCGAAGAAGCGAAAGGGCCTCCGATCTCGTTGGGGACGCCATTTTCGAAGAAATCGATAGAATAGTTTAGTGAAAGAAAGTTTAGGGATTTGACGAAGACTTTCTTTGGCATCACAACAATAACAATAATAAATTAATAGAAAACAATATATTGTCGATTATTATACTTACGAAGGCTAAATTAAATCATATGAAATAAAATTTAATTTTGTTCTATTATATAAACTAAATAGTATTTAACTTTAATTAAAAATTTT ATGTCACCTTTTAGGAAATCCCCTATAAATGTTGGTAGGCACGGCTCAAGCCAACCTGCCAATTCTGCTCGTTCCAGTCCAAACCCAGTTAATTCAAATGATAATTTAGACAAGAAGCAAAAGCAGTCCTCAAGAATCACCTCTTCTCATCAGGCAACTGCAGCACCAAATCCCAAGTCAGCTCTTTTCGACGATCATCTTGAGAAAGGGACTGACTCATCTTCATATTCTTCTTCTTCAAGTTCATATTCATGGTCATCAAGAAACAGATACAAGAATGATTTCCGGGACTCAGGTGGGATTGAGAATCAAACAGTGGAGGAGTTGGAGAGTTATGCTGTTTATAAGGCTGAGGAGACAACTAACTCAGTCAACAACTGCCTGAAGATTGCTGAGGATATCAGAGAAGATGCAACCAAAACCTTAGTTGCCTTGCACCAACAGGGCGAGCAAATCACTCGAACCCATGTGGTCACTGCTGATATTGACAACGATCTTAGTCGGGGTGAGAAACTTCTAGGAAGTTTAGGAGGAATATTCTCTAAGACTTGGAAGCCAAAGAAAGGTCGTCAGATAACAGGCCCTGTTATCTTTGAAGGGGATCATGCTGTTATAAGCAAAGGCAACCATTTGGAGCAAAGGGAGAAATTGGGGTTAAGTCGAGCACCAAACCCACGGTCCTCACGTGCCCCACATCCTGAGCCAACAAACTCACTTCAGAAAGTTGAGGTGGAAAAGGTGAAACAAGACGATGCTCTATCAGATTTGAGCAACATATTGGGAGAACTTAAAGAAATGGCTGTTGATATGGGATCTGAACTAGACAAGCAAAATAAAGCTCTGGATCACTTGTTTGATGATGCTAACGAGGTCACAATTCGTGTCGATAATGCTAACCAGCGTGCTCGCCACCTGCTTAGAAAGTAG ATGTCACCTTTTAGGAAATCCCCTATAAATGTTGGTAGGCACGGCTCAAGCCAACCTGCCAATTCTGCTCGTTCCAGTCCAAACCCAGTTAATTCAAATGATAATTTAGACAAGAAGCAAAAGCAGTCCTCAAGAATCACCTCTTCTCATCAGGCAACTGCAGCACCAAATCCCAAGTCAGCTCTTTTCGACGATCATCTTGAGAAAGGGACTGACTCATCTTCATATTCTTCTTCTTCAAGTTCATATTCATGGTCATCAAGAAACAGATACAAGAATGATTTCCGGGACTCAGGTGGGATTGAGAATCAAACAGTGGAGGAGTTGGAGAGTTATGCTGTTTATAAGGCTGAGGAGACAACTAACTCAGTCAACAACTGCCTGAAGATTGCTGAGGATATCAGAGAAGATGCAACCAAAACCTTAGTTGCCTTGCACCAACAGGGCGAGCAAATCACTCGAACCCATGTGGTCACTGCTGATATTGACAACGATCTTAGTCGGGGTGAGAAACTTCTAGGAAGTTTAGGAGGAATATTCTCTAAGACTTGGAAGCCAAAGAAAGGTCGTCAGATAACAGGCCCTGTTATCTTTGAAGGGGATCATGCTGTTATAAGCAAAGGCAACCATTTGGAGCAAAGGGAGAAATTGGGGTTAAGTCGAGCACCAAACCCACGGTCCTCACGTGCCCCACATCCTGAGCCAACAAACTCACTTCAGAAAGTTGAGGTGGAAAAGGTGAAACAAGACGATGCTCTATCAGATTTGAGCAACATATTGGGAGAACTTAAAGAAATGGCTGTTGATATGGGATCTGAACTAGACAAGCAAAATAAAGCTCTGGATCACTTGTTTGATGATGCTAACGAGGTCACAATTCGTGTCGATAATGCTAACCAGCGTGCTCGCCACCTGCTTAGAAAGTAG MSPFRKSPINVGRHGSSQPANSARSSPNPVNSNDNLDKKQKQSSRITSSHQATAAPNPKSALFDDHLEKGTDSSSYSSSSSSYSWSSRNRYKNDFRDSGGIENQTVEELESYAVYKAEETTNSVNNCLKIAEDIREDATKTLVALHQQGEQITRTHVVTADIDNDLSRGEKLLGSLGGIFSKTWKPKKGRQITGPVIFEGDHAVISKGNHLEQREKLGLSRAPNPRSSRAPHPEPTNSLQKVEVEKVKQDDALSDLSNILGELKEMAVDMGSELDKQNKALDHLFDDANEVTIRVDNANQRARHLLRK* Homology
BLAST of CsaV3_1G002730 vs. NCBI nr
Match: XP_004138184.1 (SNAP25 homologous protein SNAP33 [Cucumis sativus] >KGN63709.1 hypothetical protein Csa_013922 [Cucumis sativus]) HSP 1 Score: 592.0 bits (1525), Expect = 2.9e-165 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. NCBI nr
Match: XP_008453247.1 (PREDICTED: putative SNAP25 homologous protein SNAP30 [Cucumis melo] >KAA0057978.1 putative SNAP25-like proteinous protein SNAP30 [Cucumis melo var. makuwa]) HSP 1 Score: 562.8 bits (1449), Expect = 1.9e-156 Identity = 295/308 (95.78%), Postives = 302/308 (98.05%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. NCBI nr
Match: XP_038879751.1 (SNAP25 homologous protein SNAP33-like [Benincasa hispida] >XP_038879752.1 SNAP25 homologous protein SNAP33-like [Benincasa hispida] >XP_038879753.1 SNAP25 homologous protein SNAP33-like [Benincasa hispida]) HSP 1 Score: 547.0 bits (1408), Expect = 1.1e-151 Identity = 286/309 (92.56%), Postives = 298/309 (96.44%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. NCBI nr
Match: XP_022921394.1 (putative SNAP25 homologous protein SNAP30 [Cucurbita moschata] >XP_022921396.1 putative SNAP25 homologous protein SNAP30 [Cucurbita moschata] >XP_022921397.1 putative SNAP25 homologous protein SNAP30 [Cucurbita moschata]) HSP 1 Score: 511.1 bits (1315), Expect = 6.5e-141 Identity = 266/309 (86.08%), Postives = 288/309 (93.20%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. NCBI nr
Match: XP_023516514.1 (putative SNAP25 homologous protein SNAP30 [Cucurbita pepo subsp. pepo] >XP_023516515.1 putative SNAP25 homologous protein SNAP30 [Cucurbita pepo subsp. pepo] >XP_023516516.1 putative SNAP25 homologous protein SNAP30 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 510.0 bits (1312), Expect = 1.4e-140 Identity = 265/309 (85.76%), Postives = 287/309 (92.88%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. ExPASy Swiss-Prot
Match: Q9S7P9 (SNAP25 homologous protein SNAP33 OS=Arabidopsis thaliana OX=3702 GN=SNAP33 PE=1 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 7.1e-82 Identity = 180/311 (57.88%), Postives = 216/311 (69.45%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. ExPASy Swiss-Prot
Match: Q9LMG8 (Putative SNAP25 homologous protein SNAP30 OS=Arabidopsis thaliana OX=3702 GN=SNAP30 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.6e-73 Identity = 147/220 (66.82%), Postives = 168/220 (76.36%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. ExPASy Swiss-Prot
Match: Q9SD96 (SNAP25 homologous protein SNAP29 OS=Arabidopsis thaliana OX=3702 GN=SNAP29 PE=2 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.5e-60 Identity = 132/246 (53.66%), Postives = 171/246 (69.51%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. ExPASy Swiss-Prot
Match: Q17QQ3 (Synaptosomal-associated protein 25 OS=Bos taurus OX=9913 GN=SNAP25 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 9.7e-15 Identity = 62/213 (29.11%), Postives = 101/213 (47.42%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. ExPASy Swiss-Prot
Match: P60878 (Synaptosomal-associated protein 25 OS=Gallus gallus OX=9031 GN=SNAP25 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 9.7e-15 Identity = 62/213 (29.11%), Postives = 101/213 (47.42%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. ExPASy TrEMBL
Match: A0A0A0LRS5 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G012100 PE=4 SV=1) HSP 1 Score: 592.0 bits (1525), Expect = 1.4e-165 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. ExPASy TrEMBL
Match: A0A5A7US66 (Putative SNAP25-like proteinous protein SNAP30 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002820 PE=4 SV=1) HSP 1 Score: 562.8 bits (1449), Expect = 9.1e-157 Identity = 295/308 (95.78%), Postives = 302/308 (98.05%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. ExPASy TrEMBL
Match: A0A1S3BVT2 (putative SNAP25 homologous protein SNAP30 OS=Cucumis melo OX=3656 GN=LOC103494024 PE=4 SV=1) HSP 1 Score: 562.8 bits (1449), Expect = 9.1e-157 Identity = 295/308 (95.78%), Postives = 302/308 (98.05%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. ExPASy TrEMBL
Match: A0A6J1E197 (putative SNAP25 homologous protein SNAP30 OS=Cucurbita moschata OX=3662 GN=LOC111429687 PE=4 SV=1) HSP 1 Score: 511.1 bits (1315), Expect = 3.1e-141 Identity = 266/309 (86.08%), Postives = 288/309 (93.20%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. ExPASy TrEMBL
Match: A0A6J1JJU0 (putative SNAP25 homologous protein SNAP30 OS=Cucurbita maxima OX=3661 GN=LOC111485094 PE=4 SV=1) HSP 1 Score: 509.2 bits (1310), Expect = 1.2e-140 Identity = 266/309 (86.08%), Postives = 287/309 (92.88%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. TAIR 10
Match: AT5G61210.1 (soluble N-ethylmaleimide-sensitive factor adaptor protein 33 ) HSP 1 Score: 305.4 bits (781), Expect = 5.0e-83 Identity = 180/311 (57.88%), Postives = 216/311 (69.45%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. TAIR 10
Match: AT1G13890.1 (soluble N-ethylmaleimide-sensitive factor adaptor protein 30 ) HSP 1 Score: 277.7 bits (709), Expect = 1.1e-74 Identity = 147/220 (66.82%), Postives = 168/220 (76.36%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. TAIR 10
Match: AT5G07880.1 (synaptosomal-associated protein SNAP25-like 29 ) HSP 1 Score: 234.6 bits (597), Expect = 1.1e-61 Identity = 132/246 (53.66%), Postives = 171/246 (69.51%), Query Frame = 0
BLAST of CsaV3_1G002730 vs. TAIR 10
Match: AT3G09740.1 (syntaxin of plants 71 ) HSP 1 Score: 42.4 bits (98), Expect = 7.9e-04 Identity = 24/70 (34.29%), Postives = 36/70 (51.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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