CsGy6G034390 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATATAAATACTATCACATTTCATGCAATAATATCTCATCTGTTCTCACCAAACGATTCATTCCAAAACCTCCATGTTTAACCAATCTGTGAGCCTCCTTTCCCTCTTCACTCTCTTTTAACTAATTAACGTAACGCTTCCCCACCTTTTTTCTTTGAACTCTAATTATTAAAATTCTTTTGTAGGATCATCAAGATCTTCTCAATGGTTGGCCGCTTGGACTTCAGGTCATGAACTCCACACTTCGATTAATGGCTGATTCAGGAACACACACATTACCATCTGCCCAACCTTCCCCTAATTTGCTCATTCCTTCATTCAGTTTCTCCTCTCTCTCTTCCTCTGAACTCGACACTCTGGTTTACTTTTCTCTCTCTATTTCATTTTTCTCAATTTAACCCAACTCTTCTTTCTTTCTTACTTACATTTGGTTTTTGACAGTCGACGGCCTCCTTCTTTCAAGACCCTAGCGTATCGCTTGGACGGCTCATTGGACTAAAGCCGGCCGACAAGACGTGGTTGTACTTTCCGACCGAGGAGAAAAAGAGTGTGTCGGCTAATTCTGCTGGCCGCCGCGTAGATGATTCCAAAACGAAGAACGCCGGTGAACATGAAATTATATCGGGACGAATCTGCATTCCGATTGTGATTGGTGTGATCTTGAAGATGATTAGAAGTCGGAGAAATTCCAGAAAGTGTAGTGTAGGATAAATTATTCCTTGGACCTGATTCTTAGAAATTTGTTATGATGGAAGATTATTGAGTCTAATAAATAAATTTCTCGGTTGGTTTTCTTGGATTTTAAAAGCTGTGTTCAACAGTTTCAATGTCTAATCTACCTCAAGAGTATAAAACAAAATACGGATCAAGAGTTT TATATAAATACTATCACATTTCATGCAATAATATCTCATCTGTTCTCACCAAACGATTCATTCCAAAACCTCCATGTTTAACCAATCTGATCATCAAGATCTTCTCAATGGTTGGCCGCTTGGACTTCAGGTCATGAACTCCACACTTCGATTAATGGCTGATTCAGGAACACACACATTACCATCTGCCCAACCTTCCCCTAATTTGCTCATTCCTTCATTCAGTTTCTCCTCTCTCTCTTCCTCTGAACTCGACACTCTGTCGACGGCCTCCTTCTTTCAAGACCCTAGCGTATCGCTTGGACGGCTCATTGGACTAAAGCCGGCCGACAAGACGTGGTTGTACTTTCCGACCGAGGAGAAAAAGAGTGTGTCGGCTAATTCTGCTGGCCGCCGCGTAGATGATTCCAAAACGAAGAACGCCGGTGAACATGAAATTATATCGGGACGAATCTGCATTCCGATTGTGATTGGTGTGATCTTGAAGATGATTAGAAGTCGGAGAAATTCCAGAAAGTGTAGTGTAGGATAAATTATTCCTTGGACCTGATTCTTAGAAATTTGTTATGATGGAAGATTATTGAGTCTAATAAATAAATTTCTCGGTTGGTTTTCTTGGATTTTAAAAGCTGTGTTCAACAGTTTCAATGTCTAATCTACCTCAAGAGTATAAAACAAAATACGGATCAAGAGTTT ATGTTTAACCAATCTGATCATCAAGATCTTCTCAATGGTTGGCCGCTTGGACTTCAGGTCATGAACTCCACACTTCGATTAATGGCTGATTCAGGAACACACACATTACCATCTGCCCAACCTTCCCCTAATTTGCTCATTCCTTCATTCAGTTTCTCCTCTCTCTCTTCCTCTGAACTCGACACTCTGTCGACGGCCTCCTTCTTTCAAGACCCTAGCGTATCGCTTGGACGGCTCATTGGACTAAAGCCGGCCGACAAGACGTGGTTGTACTTTCCGACCGAGGAGAAAAAGAGTGTGTCGGCTAATTCTGCTGGCCGCCGCGTAGATGATTCCAAAACGAAGAACGCCGGTGAACATGAAATTATATCGGGACGAATCTGCATTCCGATTGTGATTGGTGTGATCTTGAAGATGATTAGAAGTCGGAGAAATTCCAGAAAGTGTAGTGTAGGATAA MFNQSDHQDLLNGWPLGLQVMNSTLRLMADSGTHTLPSAQPSPNLLIPSFSFSSLSSSELDTLSTASFFQDPSVSLGRLIGLKPADKTWLYFPTEEKKSVSANSAGRRVDDSKTKNAGEHEIISGRICIPIVIGVILKMIRSRRNSRKCSVG* Homology
BLAST of CsGy6G034390 vs. NCBI nr
Match: XP_011658225.1 (uncharacterized protein LOC105435964 [Cucumis sativus] >KGN49251.1 hypothetical protein Csa_003245 [Cucumis sativus]) HSP 1 Score: 300 bits (767), Expect = 2.22e-102 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CsGy6G034390 vs. NCBI nr
Match: XP_008439814.1 (PREDICTED: uncharacterized protein LOC103484500 [Cucumis melo]) HSP 1 Score: 239 bits (609), Expect = 2.46e-78 Identity = 130/149 (87.25%), Postives = 134/149 (89.93%), Query Frame = 0
BLAST of CsGy6G034390 vs. NCBI nr
Match: XP_038883341.1 (uncharacterized protein At3g17950-like [Benincasa hispida]) HSP 1 Score: 203 bits (516), Expect = 3.26e-64 Identity = 115/149 (77.18%), Postives = 123/149 (82.55%), Query Frame = 0
BLAST of CsGy6G034390 vs. NCBI nr
Match: KAA0052669.1 (uncharacterized protein E6C27_scaffold120G002790 [Cucumis melo var. makuwa] >TYK13156.1 uncharacterized protein E5676_scaffold255G007680 [Cucumis melo var. makuwa]) HSP 1 Score: 188 bits (478), Expect = 8.31e-59 Identity = 103/119 (86.55%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of CsGy6G034390 vs. NCBI nr
Match: XP_023517383.1 (uncharacterized protein LOC111781162 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 171 bits (433), Expect = 5.68e-51 Identity = 97/143 (67.83%), Postives = 111/143 (77.62%), Query Frame = 0
BLAST of CsGy6G034390 vs. ExPASy TrEMBL
Match: A0A0A0KNE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518080 PE=4 SV=1) HSP 1 Score: 300 bits (767), Expect = 1.08e-102 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CsGy6G034390 vs. ExPASy TrEMBL
Match: A0A1S3B0C9 (uncharacterized protein LOC103484500 OS=Cucumis melo OX=3656 GN=LOC103484500 PE=4 SV=1) HSP 1 Score: 239 bits (609), Expect = 1.19e-78 Identity = 130/149 (87.25%), Postives = 134/149 (89.93%), Query Frame = 0
BLAST of CsGy6G034390 vs. ExPASy TrEMBL
Match: A0A5A7UGM6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007680 PE=4 SV=1) HSP 1 Score: 188 bits (478), Expect = 4.02e-59 Identity = 103/119 (86.55%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of CsGy6G034390 vs. ExPASy TrEMBL
Match: A0A6J1KXT6 (uncharacterized protein LOC111497316 OS=Cucurbita maxima OX=3661 GN=LOC111497316 PE=4 SV=1) HSP 1 Score: 170 bits (430), Expect = 7.84e-51 Identity = 96/143 (67.13%), Postives = 112/143 (78.32%), Query Frame = 0
BLAST of CsGy6G034390 vs. ExPASy TrEMBL
Match: A0A6J1EFZ8 (uncharacterized protein LOC111433832 OS=Cucurbita moschata OX=3662 GN=LOC111433832 PE=4 SV=1) HSP 1 Score: 169 bits (428), Expect = 1.58e-50 Identity = 95/143 (66.43%), Postives = 111/143 (77.62%), Query Frame = 0
BLAST of CsGy6G034390 vs. TAIR 10
Match: AT5G02440.1 (unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 6.1e-05 Identity = 34/84 (40.48%), Postives = 45/84 (53.57%), Query Frame = 0
BLAST of CsGy6G034390 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.0 bits (97), Expect = 5.1e-04 Identity = 25/65 (38.46%), Postives = 36/65 (55.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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