Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACGCCATAACACAAAGCGACCACGAGAATCATCGTCGTTGTCGTCACCACCCGATGGAATATACGATCAATCTTCGTTGCCGGAGATCGCTAACGTAAAGAGGCAGCACAGCCACGATAATGCTCAAGAATCTTCTCCTGGTACATCATTTGATTTCGATCTGTTGTCGTTCGGGGTCTTCGATTTCCCCTGGTTGAAGGACGGCCTGATTTATTCCAAATCCGATGACTGGAAATTTGAAGACGTTTTCTTCACCTCCGTTTACAATGGAGCATCCACCGCCGATATTGCTACTCCGCTTACAATTGGAACGGCGTTTACAGAGTTTCTGCCGGATCCTTGGGAGAAGGATTACGAGGCACAAGCGCCGCCGCCGCCTCCGCCGTCGTTGGACGGCGGAGAGCAGGGAGGGGAGGCAATGGATTGTATCTGGAGGTCTGTGCTAAATCAACCGCTTCAACAAGGGAGTAGTGCGTTGTAG
mRNA sequence
ATGGAACGCCATAACACAAAGCGACCACGAGAATCATCGTCGTTGTCGTCACCACCCGATGGAATATACGATCAATCTTCGTTGCCGGAGATCGCTAACGTAAAGAGGCAGCACAGCCACGATAATGCTCAAGAATCTTCTCCTGGTACATCATTTGATTTCGATCTGTTGTCGTTCGGGGTCTTCGATTTCCCCTGGTTGAAGGACGGCCTGATTTATTCCAAATCCGATGACTGGAAATTTGAAGACGTTTTCTTCACCTCCGTTTACAATGGAGCATCCACCGCCGATATTGCTACTCCGCTTACAATTGGAACGGCGTTTACAGAGTTTCTGCCGGATCCTTGGGAGAAGGATTACGAGGCACAAGCGCCGCCGCCGCCTCCGCCGTCGTTGGACGGCGGAGAGCAGGGAGGGGAGGCAATGGATTGTATCTGGAGGTCTGTGCTAAATCAACCGCTTCAACAAGGGAGTAGTGCGTTGTAG
Coding sequence (CDS)
ATGGAACGCCATAACACAAAGCGACCACGAGAATCATCGTCGTTGTCGTCACCACCCGATGGAATATACGATCAATCTTCGTTGCCGGAGATCGCTAACGTAAAGAGGCAGCACAGCCACGATAATGCTCAAGAATCTTCTCCTGGTACATCATTTGATTTCGATCTGTTGTCGTTCGGGGTCTTCGATTTCCCCTGGTTGAAGGACGGCCTGATTTATTCCAAATCCGATGACTGGAAATTTGAAGACGTTTTCTTCACCTCCGTTTACAATGGAGCATCCACCGCCGATATTGCTACTCCGCTTACAATTGGAACGGCGTTTACAGAGTTTCTGCCGGATCCTTGGGAGAAGGATTACGAGGCACAAGCGCCGCCGCCGCCTCCGCCGTCGTTGGACGGCGGAGAGCAGGGAGGGGAGGCAATGGATTGTATCTGGAGGTCTGTGCTAAATCAACCGCTTCAACAAGGGAGTAGTGCGTTGTAG
Protein sequence
MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDYEAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL*
Homology
BLAST of CsGy6G032245 vs. NCBI nr
Match:
KGN49015.1 (hypothetical protein Csa_004415 [Cucumis sativus])
HSP 1 Score: 338 bits (867), Expect = 2.45e-117
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60
MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG
Sbjct: 1 MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60
Query: 61 VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY 120
VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY
Sbjct: 61 VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY 120
Query: 121 EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL
Sbjct: 121 EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
BLAST of CsGy6G032245 vs. NCBI nr
Match:
KAA0025593.1 (hypothetical protein E6C27_scaffold253G00830 [Cucumis melo var. makuwa] >TYK12468.1 hypothetical protein E5676_scaffold255G00440 [Cucumis melo var. makuwa])
HSP 1 Score: 262 bits (669), Expect = 2.07e-87
Identity = 132/143 (92.31%), Postives = 133/143 (93.01%), Query Frame = 0
Query: 22 IYDQSSLPEIANVKRQHSHDNAQE-SSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK 81
+YDQSS PEIANVKRQHSHD QE SSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK
Sbjct: 1 MYDQSSPPEIANVKRQHSHDADQEYSSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK 60
Query: 82 FEDVFFTSVYNGAS-TADIATPLTIGT-AFTEFLPDPWEKDYEAQAPPPPPPSLDGGEQG 141
FEDVFFTSVYNGAS T DIATPLTIGT AFTEFLPDPWEKDYEAQA P PPPSLDGGEQG
Sbjct: 61 FEDVFFTSVYNGASSTFDIATPLTIGTKAFTEFLPDPWEKDYEAQALPQPPPSLDGGEQG 120
Query: 142 GEAMDCIWRSVLNQPLQQGSSAL 161
GE MDCIWRSVLNQPLQQGSSAL
Sbjct: 121 GEGMDCIWRSVLNQPLQQGSSAL 143
BLAST of CsGy6G032245 vs. NCBI nr
Match:
KAG6603846.1 (hypothetical protein SDJN03_04455, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 182 bits (463), Expect = 7.39e-56
Identity = 102/169 (60.36%), Postives = 118/169 (69.82%), Query Frame = 0
Query: 1 MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSH---DNAQESSPGTSFDFDLL 60
M+R +TKRPRESS+ +QSSLPEI N K+Q H D+A+E P T FDFDL
Sbjct: 1 MDRQSTKRPRESSA---------EQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDL- 60
Query: 61 SFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTAD---IATPLTIGTAFTEFLPD 120
SFGVFDFPWLK+ LIYS+S+DWK +DVFFTS YNG STAD I T L+ G LPD
Sbjct: 61 SFGVFDFPWLKESLIYSESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPD 120
Query: 121 PWEKDYEAQAPPPPPPSLD--GGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
PWE +YEAQ PP +LD GG Q GE +DCIW S+LNQPLQQGS AL
Sbjct: 121 PWEAEYEAQVPPT---TLDDGGGGQAGEGIDCIWSSLLNQPLQQGSRAL 156
BLAST of CsGy6G032245 vs. NCBI nr
Match:
XP_022977867.1 (uncharacterized protein LOC111478029 [Cucurbita maxima])
HSP 1 Score: 180 bits (457), Expect = 6.03e-55
Identity = 102/169 (60.36%), Postives = 117/169 (69.23%), Query Frame = 0
Query: 1 MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSH---DNAQESSPGTSFDFDLL 60
MER +TKRPRESS+ +QSSL EI N K+Q H D+A+E P T +DFDL
Sbjct: 1 MERQSTKRPRESSA---------EQSSLLEIGNGKKQRLHGGSDDAKEPLPRTFYDFDL- 60
Query: 61 SFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTAD---IATPLTIGTAFTEFLPD 120
SFGVFDFPWLK+ LIYS+S+DWK +DVFFTS YNG STAD I T L+ G LPD
Sbjct: 61 SFGVFDFPWLKESLIYSESEDWKLDDVFFTSFYNGLSTADATSIGTELSSGQLVWSNLPD 120
Query: 121 PWEKDYEAQAPPPPPPSLD--GGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
PWE +YEAQ PP +LD GG Q GE MDCIW S+LNQPLQQGS AL
Sbjct: 121 PWEAEYEAQVPPT---TLDDGGGGQAGEGMDCIWSSLLNQPLQQGSRAL 156
BLAST of CsGy6G032245 vs. NCBI nr
Match:
KAG6594718.1 (hypothetical protein SDJN03_11271, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 147 bits (372), Expect = 6.36e-42
Identity = 91/170 (53.53%), Postives = 103/170 (60.59%), Query Frame = 0
Query: 1 MERHNTKRPRESSSLSSPPD-----GIY-DQSSLPEIAN-VKRQHSHDNAQESSPGTSFD 60
M+R N KRPRESSS SS G+ +QSS PEI N KRQH G FD
Sbjct: 1 MDRRNAKRPRESSSSSSSSSSSSSAGVRNEQSSQPEIGNGEKRQHVEGF------GRLFD 60
Query: 61 FDLLSFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLP 120
DL SFGVFDFPWLKD LIYSK +DWK EDVFFTS ++TADIA LP
Sbjct: 61 LDL-SFGVFDFPWLKDSLIYSKYEDWKVEDVFFTSFDGVSTTADIALTEWSEQLVWCNLP 120
Query: 121 DPWEKDYEAQAPPPPPPSL---DGGEQGGEAMDCIWRSVLNQPLQQGSSA 160
DPWE++YEA P + DG GE MDC+W S+LNQPLQQGSS+
Sbjct: 121 DPWEEEYEAHVAPATATATAVEDGEGPAGEGMDCVWNSLLNQPLQQGSSS 163
BLAST of CsGy6G032245 vs. ExPASy TrEMBL
Match:
A0A0A0KH39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510330 PE=4 SV=1)
HSP 1 Score: 338 bits (867), Expect = 1.19e-117
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
Query: 1 MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60
MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG
Sbjct: 1 MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60
Query: 61 VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY 120
VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY
Sbjct: 61 VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY 120
Query: 121 EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL
Sbjct: 121 EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
BLAST of CsGy6G032245 vs. ExPASy TrEMBL
Match:
A0A5A7SLQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00440 PE=4 SV=1)
HSP 1 Score: 262 bits (669), Expect = 1.00e-87
Identity = 132/143 (92.31%), Postives = 133/143 (93.01%), Query Frame = 0
Query: 22 IYDQSSLPEIANVKRQHSHDNAQE-SSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK 81
+YDQSS PEIANVKRQHSHD QE SSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK
Sbjct: 1 MYDQSSPPEIANVKRQHSHDADQEYSSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK 60
Query: 82 FEDVFFTSVYNGAS-TADIATPLTIGT-AFTEFLPDPWEKDYEAQAPPPPPPSLDGGEQG 141
FEDVFFTSVYNGAS T DIATPLTIGT AFTEFLPDPWEKDYEAQA P PPPSLDGGEQG
Sbjct: 61 FEDVFFTSVYNGASSTFDIATPLTIGTKAFTEFLPDPWEKDYEAQALPQPPPSLDGGEQG 120
Query: 142 GEAMDCIWRSVLNQPLQQGSSAL 161
GE MDCIWRSVLNQPLQQGSSAL
Sbjct: 121 GEGMDCIWRSVLNQPLQQGSSAL 143
BLAST of CsGy6G032245 vs. ExPASy TrEMBL
Match:
A0A6J1IJM6 (uncharacterized protein LOC111478029 OS=Cucurbita maxima OX=3661 GN=LOC111478029 PE=4 SV=1)
HSP 1 Score: 180 bits (457), Expect = 2.92e-55
Identity = 102/169 (60.36%), Postives = 117/169 (69.23%), Query Frame = 0
Query: 1 MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSH---DNAQESSPGTSFDFDLL 60
MER +TKRPRESS+ +QSSL EI N K+Q H D+A+E P T +DFDL
Sbjct: 1 MERQSTKRPRESSA---------EQSSLLEIGNGKKQRLHGGSDDAKEPLPRTFYDFDL- 60
Query: 61 SFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTAD---IATPLTIGTAFTEFLPD 120
SFGVFDFPWLK+ LIYS+S+DWK +DVFFTS YNG STAD I T L+ G LPD
Sbjct: 61 SFGVFDFPWLKESLIYSESEDWKLDDVFFTSFYNGLSTADATSIGTELSSGQLVWSNLPD 120
Query: 121 PWEKDYEAQAPPPPPPSLD--GGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
PWE +YEAQ PP +LD GG Q GE MDCIW S+LNQPLQQGS AL
Sbjct: 121 PWEAEYEAQVPPT---TLDDGGGGQAGEGMDCIWSSLLNQPLQQGSRAL 156
BLAST of CsGy6G032245 vs. ExPASy TrEMBL
Match:
A0A6J1BUL5 (uncharacterized protein LOC111005508 OS=Momordica charantia OX=3673 GN=LOC111005508 PE=4 SV=1)
HSP 1 Score: 112 bits (280), Expect = 9.13e-29
Identity = 75/136 (55.15%), Postives = 87/136 (63.97%), Query Frame = 0
Query: 1 MERHNTKRPRESSSLS--SPPDGI-YDQS--SLPEIANVKRQHSHDNAQESSPGTSFDFD 60
M+RHNTKR RES S S S D + Y++S S PEI NVK+QH+ + + G S D D
Sbjct: 1 MDRHNTKRARESLSASAASSDDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSSDLD 60
Query: 61 LLSFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSV-YNGASTADIATPLTIGTAFTEF--- 119
VFDFPWLKD LI SKS+DWKFEDVFFTS+ NGASTAD LTIGTAFTE
Sbjct: 61 -----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGASTAD--DTLTIGTAFTELSGQ 120
BLAST of CsGy6G032245 vs. ExPASy TrEMBL
Match:
A0A6P9ECU5 (uncharacterized protein LOC118348239 OS=Juglans regia OX=51240 GN=LOC118348239 PE=4 SV=1)
HSP 1 Score: 77.4 bits (189), Expect = 9.19e-15
Identity = 52/124 (41.94%), Postives = 69/124 (55.65%), Query Frame = 0
Query: 41 DNAQESSPGTSFDFDL-LSFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVY---NGASTA 100
+N +SS + D L L GVFDFPWLKDG+I SKS+D +FED FF+S+ N ++
Sbjct: 43 ENRNDSSNVKTLDSSLALEVGVFDFPWLKDGVI-SKSEDCRFEDAFFSSLIYDMNSTNST 102
Query: 101 DI---ATPLTIGTAFTEFLPDPWEKDYEAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQP 157
DI L + +LP+ D + P P DG E E +DCIW S+L+QP
Sbjct: 103 DIEFSGKSLCQTSEELLYLPENKSNDNLFR----PVPEGDGSEM--EGVDCIWSSLLSQP 159
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KGN49015.1 | 2.45e-117 | 100.00 | hypothetical protein Csa_004415 [Cucumis sativus] | [more] |
KAA0025593.1 | 2.07e-87 | 92.31 | hypothetical protein E6C27_scaffold253G00830 [Cucumis melo var. makuwa] >TYK1246... | [more] |
KAG6603846.1 | 7.39e-56 | 60.36 | hypothetical protein SDJN03_04455, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022977867.1 | 6.03e-55 | 60.36 | uncharacterized protein LOC111478029 [Cucurbita maxima] | [more] |
KAG6594718.1 | 6.36e-42 | 53.53 | hypothetical protein SDJN03_11271, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KH39 | 1.19e-117 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510330 PE=4 SV=1 | [more] |
A0A5A7SLQ6 | 1.00e-87 | 92.31 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1IJM6 | 2.92e-55 | 60.36 | uncharacterized protein LOC111478029 OS=Cucurbita maxima OX=3661 GN=LOC111478029... | [more] |
A0A6J1BUL5 | 9.13e-29 | 55.15 | uncharacterized protein LOC111005508 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A6P9ECU5 | 9.19e-15 | 41.94 | uncharacterized protein LOC118348239 OS=Juglans regia OX=51240 GN=LOC118348239 P... | [more] |
Match Name | E-value | Identity | Description | |