CsGy6G032245 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G032245
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionDYW_deaminase domain-containing protein
LocationGy14Chr6: 29567744 .. 29568229 (+)
RNA-Seq ExpressionCsGy6G032245
SyntenyCsGy6G032245
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACGCCATAACACAAAGCGACCACGAGAATCATCGTCGTTGTCGTCACCACCCGATGGAATATACGATCAATCTTCGTTGCCGGAGATCGCTAACGTAAAGAGGCAGCACAGCCACGATAATGCTCAAGAATCTTCTCCTGGTACATCATTTGATTTCGATCTGTTGTCGTTCGGGGTCTTCGATTTCCCCTGGTTGAAGGACGGCCTGATTTATTCCAAATCCGATGACTGGAAATTTGAAGACGTTTTCTTCACCTCCGTTTACAATGGAGCATCCACCGCCGATATTGCTACTCCGCTTACAATTGGAACGGCGTTTACAGAGTTTCTGCCGGATCCTTGGGAGAAGGATTACGAGGCACAAGCGCCGCCGCCGCCTCCGCCGTCGTTGGACGGCGGAGAGCAGGGAGGGGAGGCAATGGATTGTATCTGGAGGTCTGTGCTAAATCAACCGCTTCAACAAGGGAGTAGTGCGTTGTAG

mRNA sequence

ATGGAACGCCATAACACAAAGCGACCACGAGAATCATCGTCGTTGTCGTCACCACCCGATGGAATATACGATCAATCTTCGTTGCCGGAGATCGCTAACGTAAAGAGGCAGCACAGCCACGATAATGCTCAAGAATCTTCTCCTGGTACATCATTTGATTTCGATCTGTTGTCGTTCGGGGTCTTCGATTTCCCCTGGTTGAAGGACGGCCTGATTTATTCCAAATCCGATGACTGGAAATTTGAAGACGTTTTCTTCACCTCCGTTTACAATGGAGCATCCACCGCCGATATTGCTACTCCGCTTACAATTGGAACGGCGTTTACAGAGTTTCTGCCGGATCCTTGGGAGAAGGATTACGAGGCACAAGCGCCGCCGCCGCCTCCGCCGTCGTTGGACGGCGGAGAGCAGGGAGGGGAGGCAATGGATTGTATCTGGAGGTCTGTGCTAAATCAACCGCTTCAACAAGGGAGTAGTGCGTTGTAG

Coding sequence (CDS)

ATGGAACGCCATAACACAAAGCGACCACGAGAATCATCGTCGTTGTCGTCACCACCCGATGGAATATACGATCAATCTTCGTTGCCGGAGATCGCTAACGTAAAGAGGCAGCACAGCCACGATAATGCTCAAGAATCTTCTCCTGGTACATCATTTGATTTCGATCTGTTGTCGTTCGGGGTCTTCGATTTCCCCTGGTTGAAGGACGGCCTGATTTATTCCAAATCCGATGACTGGAAATTTGAAGACGTTTTCTTCACCTCCGTTTACAATGGAGCATCCACCGCCGATATTGCTACTCCGCTTACAATTGGAACGGCGTTTACAGAGTTTCTGCCGGATCCTTGGGAGAAGGATTACGAGGCACAAGCGCCGCCGCCGCCTCCGCCGTCGTTGGACGGCGGAGAGCAGGGAGGGGAGGCAATGGATTGTATCTGGAGGTCTGTGCTAAATCAACCGCTTCAACAAGGGAGTAGTGCGTTGTAG

Protein sequence

MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDYEAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL*
Homology
BLAST of CsGy6G032245 vs. NCBI nr
Match: KGN49015.1 (hypothetical protein Csa_004415 [Cucumis sativus])

HSP 1 Score: 338 bits (867), Expect = 2.45e-117
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0

Query: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60
           MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG
Sbjct: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60

Query: 61  VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY 120
           VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY
Sbjct: 61  VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY 120

Query: 121 EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
           EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL
Sbjct: 121 EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL 161

BLAST of CsGy6G032245 vs. NCBI nr
Match: KAA0025593.1 (hypothetical protein E6C27_scaffold253G00830 [Cucumis melo var. makuwa] >TYK12468.1 hypothetical protein E5676_scaffold255G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 262 bits (669), Expect = 2.07e-87
Identity = 132/143 (92.31%), Postives = 133/143 (93.01%), Query Frame = 0

Query: 22  IYDQSSLPEIANVKRQHSHDNAQE-SSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK 81
           +YDQSS PEIANVKRQHSHD  QE SSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK
Sbjct: 1   MYDQSSPPEIANVKRQHSHDADQEYSSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK 60

Query: 82  FEDVFFTSVYNGAS-TADIATPLTIGT-AFTEFLPDPWEKDYEAQAPPPPPPSLDGGEQG 141
           FEDVFFTSVYNGAS T DIATPLTIGT AFTEFLPDPWEKDYEAQA P PPPSLDGGEQG
Sbjct: 61  FEDVFFTSVYNGASSTFDIATPLTIGTKAFTEFLPDPWEKDYEAQALPQPPPSLDGGEQG 120

Query: 142 GEAMDCIWRSVLNQPLQQGSSAL 161
           GE MDCIWRSVLNQPLQQGSSAL
Sbjct: 121 GEGMDCIWRSVLNQPLQQGSSAL 143

BLAST of CsGy6G032245 vs. NCBI nr
Match: KAG6603846.1 (hypothetical protein SDJN03_04455, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 182 bits (463), Expect = 7.39e-56
Identity = 102/169 (60.36%), Postives = 118/169 (69.82%), Query Frame = 0

Query: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSH---DNAQESSPGTSFDFDLL 60
           M+R +TKRPRESS+         +QSSLPEI N K+Q  H   D+A+E  P T FDFDL 
Sbjct: 1   MDRQSTKRPRESSA---------EQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDL- 60

Query: 61  SFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTAD---IATPLTIGTAFTEFLPD 120
           SFGVFDFPWLK+ LIYS+S+DWK +DVFFTS YNG STAD   I T L+ G      LPD
Sbjct: 61  SFGVFDFPWLKESLIYSESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPD 120

Query: 121 PWEKDYEAQAPPPPPPSLD--GGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
           PWE +YEAQ PP    +LD  GG Q GE +DCIW S+LNQPLQQGS AL
Sbjct: 121 PWEAEYEAQVPPT---TLDDGGGGQAGEGIDCIWSSLLNQPLQQGSRAL 156

BLAST of CsGy6G032245 vs. NCBI nr
Match: XP_022977867.1 (uncharacterized protein LOC111478029 [Cucurbita maxima])

HSP 1 Score: 180 bits (457), Expect = 6.03e-55
Identity = 102/169 (60.36%), Postives = 117/169 (69.23%), Query Frame = 0

Query: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSH---DNAQESSPGTSFDFDLL 60
           MER +TKRPRESS+         +QSSL EI N K+Q  H   D+A+E  P T +DFDL 
Sbjct: 1   MERQSTKRPRESSA---------EQSSLLEIGNGKKQRLHGGSDDAKEPLPRTFYDFDL- 60

Query: 61  SFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTAD---IATPLTIGTAFTEFLPD 120
           SFGVFDFPWLK+ LIYS+S+DWK +DVFFTS YNG STAD   I T L+ G      LPD
Sbjct: 61  SFGVFDFPWLKESLIYSESEDWKLDDVFFTSFYNGLSTADATSIGTELSSGQLVWSNLPD 120

Query: 121 PWEKDYEAQAPPPPPPSLD--GGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
           PWE +YEAQ PP    +LD  GG Q GE MDCIW S+LNQPLQQGS AL
Sbjct: 121 PWEAEYEAQVPPT---TLDDGGGGQAGEGMDCIWSSLLNQPLQQGSRAL 156

BLAST of CsGy6G032245 vs. NCBI nr
Match: KAG6594718.1 (hypothetical protein SDJN03_11271, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147 bits (372), Expect = 6.36e-42
Identity = 91/170 (53.53%), Postives = 103/170 (60.59%), Query Frame = 0

Query: 1   MERHNTKRPRESSSLSSPPD-----GIY-DQSSLPEIAN-VKRQHSHDNAQESSPGTSFD 60
           M+R N KRPRESSS SS        G+  +QSS PEI N  KRQH          G  FD
Sbjct: 1   MDRRNAKRPRESSSSSSSSSSSSSAGVRNEQSSQPEIGNGEKRQHVEGF------GRLFD 60

Query: 61  FDLLSFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLP 120
            DL SFGVFDFPWLKD LIYSK +DWK EDVFFTS    ++TADIA            LP
Sbjct: 61  LDL-SFGVFDFPWLKDSLIYSKYEDWKVEDVFFTSFDGVSTTADIALTEWSEQLVWCNLP 120

Query: 121 DPWEKDYEAQAPPPPPPSL---DGGEQGGEAMDCIWRSVLNQPLQQGSSA 160
           DPWE++YEA   P    +    DG    GE MDC+W S+LNQPLQQGSS+
Sbjct: 121 DPWEEEYEAHVAPATATATAVEDGEGPAGEGMDCVWNSLLNQPLQQGSSS 163

BLAST of CsGy6G032245 vs. ExPASy TrEMBL
Match: A0A0A0KH39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510330 PE=4 SV=1)

HSP 1 Score: 338 bits (867), Expect = 1.19e-117
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0

Query: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60
           MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG
Sbjct: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSHDNAQESSPGTSFDFDLLSFG 60

Query: 61  VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY 120
           VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY
Sbjct: 61  VFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTADIATPLTIGTAFTEFLPDPWEKDY 120

Query: 121 EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
           EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL
Sbjct: 121 EAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQPLQQGSSAL 161

BLAST of CsGy6G032245 vs. ExPASy TrEMBL
Match: A0A5A7SLQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00440 PE=4 SV=1)

HSP 1 Score: 262 bits (669), Expect = 1.00e-87
Identity = 132/143 (92.31%), Postives = 133/143 (93.01%), Query Frame = 0

Query: 22  IYDQSSLPEIANVKRQHSHDNAQE-SSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK 81
           +YDQSS PEIANVKRQHSHD  QE SSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK
Sbjct: 1   MYDQSSPPEIANVKRQHSHDADQEYSSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK 60

Query: 82  FEDVFFTSVYNGAS-TADIATPLTIGT-AFTEFLPDPWEKDYEAQAPPPPPPSLDGGEQG 141
           FEDVFFTSVYNGAS T DIATPLTIGT AFTEFLPDPWEKDYEAQA P PPPSLDGGEQG
Sbjct: 61  FEDVFFTSVYNGASSTFDIATPLTIGTKAFTEFLPDPWEKDYEAQALPQPPPSLDGGEQG 120

Query: 142 GEAMDCIWRSVLNQPLQQGSSAL 161
           GE MDCIWRSVLNQPLQQGSSAL
Sbjct: 121 GEGMDCIWRSVLNQPLQQGSSAL 143

BLAST of CsGy6G032245 vs. ExPASy TrEMBL
Match: A0A6J1IJM6 (uncharacterized protein LOC111478029 OS=Cucurbita maxima OX=3661 GN=LOC111478029 PE=4 SV=1)

HSP 1 Score: 180 bits (457), Expect = 2.92e-55
Identity = 102/169 (60.36%), Postives = 117/169 (69.23%), Query Frame = 0

Query: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSH---DNAQESSPGTSFDFDLL 60
           MER +TKRPRESS+         +QSSL EI N K+Q  H   D+A+E  P T +DFDL 
Sbjct: 1   MERQSTKRPRESSA---------EQSSLLEIGNGKKQRLHGGSDDAKEPLPRTFYDFDL- 60

Query: 61  SFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTAD---IATPLTIGTAFTEFLPD 120
           SFGVFDFPWLK+ LIYS+S+DWK +DVFFTS YNG STAD   I T L+ G      LPD
Sbjct: 61  SFGVFDFPWLKESLIYSESEDWKLDDVFFTSFYNGLSTADATSIGTELSSGQLVWSNLPD 120

Query: 121 PWEKDYEAQAPPPPPPSLD--GGEQGGEAMDCIWRSVLNQPLQQGSSAL 161
           PWE +YEAQ PP    +LD  GG Q GE MDCIW S+LNQPLQQGS AL
Sbjct: 121 PWEAEYEAQVPPT---TLDDGGGGQAGEGMDCIWSSLLNQPLQQGSRAL 156

BLAST of CsGy6G032245 vs. ExPASy TrEMBL
Match: A0A6J1BUL5 (uncharacterized protein LOC111005508 OS=Momordica charantia OX=3673 GN=LOC111005508 PE=4 SV=1)

HSP 1 Score: 112 bits (280), Expect = 9.13e-29
Identity = 75/136 (55.15%), Postives = 87/136 (63.97%), Query Frame = 0

Query: 1   MERHNTKRPRESSSLS--SPPDGI-YDQS--SLPEIANVKRQHSHDNAQESSPGTSFDFD 60
           M+RHNTKR RES S S  S  D + Y++S  S PEI NVK+QH+     + + G S D D
Sbjct: 1   MDRHNTKRARESLSASAASSDDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSSDLD 60

Query: 61  LLSFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSV-YNGASTADIATPLTIGTAFTEF--- 119
                VFDFPWLKD LI SKS+DWKFEDVFFTS+  NGASTAD    LTIGTAFTE    
Sbjct: 61  -----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGASTAD--DTLTIGTAFTELSGQ 120

BLAST of CsGy6G032245 vs. ExPASy TrEMBL
Match: A0A6P9ECU5 (uncharacterized protein LOC118348239 OS=Juglans regia OX=51240 GN=LOC118348239 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.19e-15
Identity = 52/124 (41.94%), Postives = 69/124 (55.65%), Query Frame = 0

Query: 41  DNAQESSPGTSFDFDL-LSFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVY---NGASTA 100
           +N  +SS   + D  L L  GVFDFPWLKDG+I SKS+D +FED FF+S+    N  ++ 
Sbjct: 43  ENRNDSSNVKTLDSSLALEVGVFDFPWLKDGVI-SKSEDCRFEDAFFSSLIYDMNSTNST 102

Query: 101 DI---ATPLTIGTAFTEFLPDPWEKDYEAQAPPPPPPSLDGGEQGGEAMDCIWRSVLNQP 157
           DI      L   +    +LP+    D   +    P P  DG E   E +DCIW S+L+QP
Sbjct: 103 DIEFSGKSLCQTSEELLYLPENKSNDNLFR----PVPEGDGSEM--EGVDCIWSSLLSQP 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN49015.12.45e-117100.00hypothetical protein Csa_004415 [Cucumis sativus][more]
KAA0025593.12.07e-8792.31hypothetical protein E6C27_scaffold253G00830 [Cucumis melo var. makuwa] >TYK1246... [more]
KAG6603846.17.39e-5660.36hypothetical protein SDJN03_04455, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022977867.16.03e-5560.36uncharacterized protein LOC111478029 [Cucurbita maxima][more]
KAG6594718.16.36e-4253.53hypothetical protein SDJN03_11271, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A0A0KH391.19e-117100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510330 PE=4 SV=1[more]
A0A5A7SLQ61.00e-8792.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1IJM62.92e-5560.36uncharacterized protein LOC111478029 OS=Cucurbita maxima OX=3661 GN=LOC111478029... [more]
A0A6J1BUL59.13e-2955.15uncharacterized protein LOC111005508 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6P9ECU59.19e-1541.94uncharacterized protein LOC118348239 OS=Juglans regia OX=51240 GN=LOC118348239 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G032245.1CsGy6G032245.1mRNA