CsGy6G028920 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G028920
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Basic helix-loop-helix transcription factor
Location	Gy14Chr6: 27679924 .. 27681692 (-)
RNA-Seq Expression	CsGy6G028920
Synteny	CsGy6G028920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAATTCCTTTTTCTAACTTTATTTTTCTTTTCCATTGAGTTCTAAATGGAGATCTCATCACTGAAATGGATATCTGATTGGGTATTTTTCATTATTAAATCTTTCATTCGTTAATTAAAATTTTCTATAAATGTATATTTATTTCCTTATTTTCTTTTTAGGAAATTGAAGATGCTTCACCGTTTATGGATGAATTTCATATAGACCCATTTGAGTTTCCGTTAGATGCGTTGCAATTTGATGACTTGTATGACTTGCCGGTTCTGCCGTATGCGGTGGAGGAAAGGCCGGCCAAGCGGGTTAAGGTGGAGGAGGACGTGGAGGCGGGGGGCGGGGGGATAAACAAATGTAAGACCACATTTGTTGGAAATAATCATAAGGGTGATTCGTCGTTATCATCTTCGCAAATAATTAGCTTTGAGAATAATTGGAATTATGAATCAGTAAAAAATTGGAATTGTACTAATGGGAAGAGAAGTTGTTCAATGAATGGTAGAGAACATGTGATAGCTGAGAGAAAGCGTAGGGAGAAGCTTAGCCAAAGATTCATTGCTCTTTCAGCTCTAATCCCTGACCTTAACAAGGTATTGTGTACTAACTACACTTTAGTTCATTACTTATTTTTCATTCTAACTTTTTATATAAGTTCGTGTATTTTAATTTTGAATGTTATGATGGTCAAATTAGAAAGAAAAAGTTTAAAGGGGTCTACTTGCAGTTTCTTCTTATTTTTTCAAAAATTGACACTCAAAAACTGTGAAATTGTGTAGTAGCTGATATCTGCTATATCTCACAGATTTCTTATTTTCAAATGTATATTATACTACCAAGTTTAAGAATTTATTAGAAAAAAATTTGAAATGAAATGGTTTAGGTCATTTACTCTTGTGGCTTTCTGGTCTAAAGAAAATGCTCTATTATGCTATTATGATGTTTCTTCTGTTTCTTTAAATTGGTTTAACTCTTTTTGTATTTTATTGGCAATATATTAATTTGGTCTGGGGTTGGGGTATGATAAAAATGCTAAGAATGTGTAACCTAAATGAGATTTTTTTAGGGTTTTTTTTAATAATCTGACCAAGAATTTTATTTATTTATTTTCTTCATAAAAAAAAAAAAGGTTAGAATTTAGAAGAAAATATGCATATAAATTTGAAAAACATAAAACTAATTAAAGATAAAATGGTCATCAAAGAGACCTAAAATTTATTTGATTTGTGTGTTGGCAGGCAGACAAAGCTTCGATATTGGGAGGAGCCATAAGACATGTAAAAGAGCTTCAAGAGCGTTTGAAAGTGGTGGAGGAACAAACTACTTCCAAAACTTCGAAGCCACAATCGCCAGTGGTGTGTGTGAAGAGAACCACCCTGCAGCCTTCCTCATCCGACGATGACACCTCATCATCGGACGAGAACAGTTTTTCCGGCAGACTAAGAAGTACTCCTGAGATAGAAGTAAGATTCGTAAACAATGATGTTCTCATCAGAATTCACTGCCACAAACGCAAAGGCTGTCTCTCTTATTTGCTCAACAAAATCCAGAGCTTTAATAATCTCACAATCCTCAACACTAGTGCTTTGCCATTCTCCCACTCCAACCTCGATATTACGATTGTTGCTCAGGTATAATTATTAACTTTAAAGCTCTCTTTATCTGGTTAATTATTGCATACTTTGGTCCGAGACTCCGATATCTAAGGTTTACAGAAAGTTGAATTTAGTTCGAAACTATTTATATGAACAATTTATGAGATGTTATGAAACCAAAA

mRNA sequence

CCAATTCCTTTTTCTAACTTTATTTTTCTTTTCCATTGAGTTCTAAATGGAGATCTCATCACTGAAATGGATATCTGATTGGGAAATTGAAGATGCTTCACCGTTTATGGATGAATTTCATATAGACCCATTTGAGTTTCCGTTAGATGCGTTGCAATTTGATGACTTGTATGACTTGCCGGTTCTGCCGTATGCGGTGGAGGAAAGGCCGGCCAAGCGGGTTAAGGTGGAGGAGGACGTGGAGGCGGGGGGCGGGGGGATAAACAAATGTAAGACCACATTTGTTGGAAATAATCATAAGGGTGATTCGTCGTTATCATCTTCGCAAATAATTAGCTTTGAGAATAATTGGAATTATGAATCAGTAAAAAATTGGAATTGTACTAATGGGAAGAGAAGTTGTTCAATGAATGGTAGAGAACATGTGATAGCTGAGAGAAAGCGTAGGGAGAAGCTTAGCCAAAGATTCATTGCTCTTTCAGCTCTAATCCCTGACCTTAACAAGGCAGACAAAGCTTCGATATTGGGAGGAGCCATAAGACATGTAAAAGAGCTTCAAGAGCGTTTGAAAGTGGTGGAGGAACAAACTACTTCCAAAACTTCGAAGCCACAATCGCCAGTGGTGTGTGTGAAGAGAACCACCCTGCAGCCTTCCTCATCCGACGATGACACCTCATCATCGGACGAGAACAGTTTTTCCGGCAGACTAAGAAGTACTCCTGAGATAGAAGTAAGATTCGTAAACAATGATGTTCTCATCAGAATTCACTGCCACAAACGCAAAGGCTGTCTCTCTTATTTGCTCAACAAAATCCAGAGCTTTAATAATCTCACAATCCTCAACACTAGTGCTTTGCCATTCTCCCACTCCAACCTCGATATTACGATTGTTGCTCAGGTATAATTATTAACTTTAAAGCTCTCTTTATCTGGTTAATTATTGCATACTTTGGTCCGAGACTCCGATATCTAAGGTTTACAGAAAGTTGAATTTAGTTCGAAACTATTTATATGAACAATTTATGAGATGTTATGAAACCAAAA

Coding sequence (CDS)

ATGGAGATCTCATCACTGAAATGGATATCTGATTGGGAAATTGAAGATGCTTCACCGTTTATGGATGAATTTCATATAGACCCATTTGAGTTTCCGTTAGATGCGTTGCAATTTGATGACTTGTATGACTTGCCGGTTCTGCCGTATGCGGTGGAGGAAAGGCCGGCCAAGCGGGTTAAGGTGGAGGAGGACGTGGAGGCGGGGGGCGGGGGGATAAACAAATGTAAGACCACATTTGTTGGAAATAATCATAAGGGTGATTCGTCGTTATCATCTTCGCAAATAATTAGCTTTGAGAATAATTGGAATTATGAATCAGTAAAAAATTGGAATTGTACTAATGGGAAGAGAAGTTGTTCAATGAATGGTAGAGAACATGTGATAGCTGAGAGAAAGCGTAGGGAGAAGCTTAGCCAAAGATTCATTGCTCTTTCAGCTCTAATCCCTGACCTTAACAAGGCAGACAAAGCTTCGATATTGGGAGGAGCCATAAGACATGTAAAAGAGCTTCAAGAGCGTTTGAAAGTGGTGGAGGAACAAACTACTTCCAAAACTTCGAAGCCACAATCGCCAGTGGTGTGTGTGAAGAGAACCACCCTGCAGCCTTCCTCATCCGACGATGACACCTCATCATCGGACGAGAACAGTTTTTCCGGCAGACTAAGAAGTACTCCTGAGATAGAAGTAAGATTCGTAAACAATGATGTTCTCATCAGAATTCACTGCCACAAACGCAAAGGCTGTCTCTCTTATTTGCTCAACAAAATCCAGAGCTTTAATAATCTCACAATCCTCAACACTAGTGCTTTGCCATTCTCCCACTCCAACCTCGATATTACGATTGTTGCTCAGGTATAA

Protein sequence

MEISSLKWISDWEIEDASPFMDEFHIDPFEFPLDALQFDDLYDLPVLPYAVEERPAKRVKVEEDVEAGGGGINKCKTTFVGNNHKGDSSLSSSQIISFENNWNYESVKNWNCTNGKRSCSMNGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQTTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIRIHCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQV*

Homology

[Close]

BLAST of CsGy6G028920 vs. ExPASy Swiss-Prot
Match: Q1PF17 (Transcription factor bHLH18 OS=Arabidopsis thaliana OX=3702 GN=BHLH18 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 84/169 (49.70%), Postives = 111/169 (65.68%), Query Frame = 0


Query: 122 NGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQT 181
           N ++H++AERKRREKL+QRF+ALSALIP L K DKAS+LG AI+H+K LQE +K  EEQ 
Sbjct: 123 NAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQ- 182

Query: 182 TSKTSKPQSPVVCVKRTTL------QPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNND 241
             K  K    VV VK+++L      QPSSS   +S  + NS S  L   PEIEVR    D
Sbjct: 183 --KKEKTMESVVLVKKSSLVLDENHQPSSS--SSSDGNRNSSSSNL---PEIEVRVSGKD 242

Query: 242 VLIRIHCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQ 285
           VLI+I C K+KG +  ++ +I+    L+I N++ LPF     DI+I+AQ
Sbjct: 243 VLIKILCEKQKGNVIKIMGEIEKL-GLSITNSNVLPFG-PTFDISIIAQ 281

[Close]

BLAST of CsGy6G028920 vs. ExPASy Swiss-Prot
Match: Q9T072 (Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 7.1e-28
Identity = 79/163 (48.47%), Postives = 111/163 (68.10%), Query Frame = 0


Query: 122 NGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQT 181
           N ++H+IAERKRREKL+QRF+ALSAL+P L K DKAS+LG A++H+K LQER+  +EEQ 
Sbjct: 149 NAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQ- 208

Query: 182 TSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIRIH 241
             K  +    +V VK++ L    ++   SSS E+ FS      PEIEVRF + DVLI+I 
Sbjct: 209 --KKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSD--LDLPEIEVRFSDEDVLIKIL 268

Query: 242 CHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQ 285
           C K+KG L+ ++ +I+   ++ I N+S L F    LDITI+A+
Sbjct: 269 CEKQKGHLAKIMAEIEKL-HILITNSSVLNFG-PTLDITIIAK 304

[Close]

BLAST of CsGy6G028920 vs. ExPASy Swiss-Prot
Match: Q8S3F1 (Transcription factor NAI1 OS=Arabidopsis thaliana OX=3702 GN=NAI1 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-27
Identity = 96/264 (36.36%), Postives = 144/264 (54.55%), Query Frame = 0


Query: 53  ERPAKRVKVEEDVEAGGGGINKCKTTFVGNNHKGDSSLSSSQIISF----------ENNW 112
           ERP K++K            N   +T    +    S   +SQ+ISF          E + 
Sbjct: 50  ERPTKQMKTN----------NNMNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVETSL 109

Query: 113 NYESVKNWNCTNG--KRSCSMNG--------REHVIAERKRREKLSQRFIALSALIPDLN 172
           N+ +  + +   G  ++ C  NG        +EHV+AERKRR+KL++R IALSAL+P L 
Sbjct: 110 NFSNQVSMDQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLK 169

Query: 173 KADKASILGGAIRHVKELQERLKVVEEQTTSKTSKPQSPVVCVKRTTL---QPSSSDDDT 232
           K DKA++L  AI+H+K+LQER+K +EE+    T K    ++ VKR+ +     SSS   T
Sbjct: 170 KTDKATVLEDAIKHLKQLQERVKKLEEERV-VTKKMDQSIILVKRSQVYLDDDSSSYSST 229

Query: 233 --------SSSDENSFSGRLRSTPEIEVRFVNNDVLIRIHCHKRKGCLSYLLNKIQSFNN 286
                   SSSDE S     ++ P IE R  + D+LIR+HC K KGC+  +L+ ++ F  
Sbjct: 230 CSAASPLSSSSDEVSIF--KQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKF-R 289

[Close]

BLAST of CsGy6G028920 vs. ExPASy Swiss-Prot
Match: Q1PF16 (Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.5e-27
Identity = 79/178 (44.38%), Postives = 113/178 (63.48%), Query Frame = 0


Query: 108 KNWNCTNGKRSCSMNGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHV 167
           K   C++G RS  +  +EHV+AERKRREKLS++FIALSAL+P L KADK +IL  AI  +
Sbjct: 103 KRKTCSHGTRS-PVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRM 162

Query: 168 KELQERLKVVEEQTTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEI 227
           K+LQE+L+ ++E+  + T + +S ++  K         +   S S    F    ++ PEI
Sbjct: 163 KQLQEQLRTLKEEKEA-TRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFD---QALPEI 222

Query: 228 EVRFVNNDVLIRIHCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQV 286
           E +   ND+LIRI C K KGC+  +LN I++F  L I N+  LPF  S LDIT++AQ+
Sbjct: 223 EAKISQNDILIRILCEKSKGCMINILNTIENF-QLRIENSIVLPFGDSTLDITVLAQM 274

[Close]

BLAST of CsGy6G028920 vs. ExPASy Swiss-Prot
Match: A0A3Q7ELQ2 (Transcription factor MTB1 OS=Solanum lycopersicum OX=4081 GN=MTB1 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.4e-13
Identity = 51/136 (37.50%), Postives = 79/136 (58.09%), Query Frame = 0


Query: 122 NGRE----HVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVV 181
           NGRE    HV AER+RREKL+QRF AL A++P+++K DKAS+LG AI ++ ELQ++L+ +
Sbjct: 427 NGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYITELQKKLRDM 486

Query: 182 EEQTTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVL 241
           E +                R     S+S D  +S D  S   ++R  P+I +   N++V+
Sbjct: 487 ESE----------------RELRLGSTSRDAITSEDSPSSEIQIRG-PDINIEAANDEVI 545

Query: 242 IRIHCHKRKGCLSYLL 254
           +R+ C      LS ++
Sbjct: 547 VRVSCSLETHPLSRII 545

[Close]

BLAST of CsGy6G028920 vs. NCBI nr
Match: XP_011657919.2 (transcription factor bHLH19 [Cucumis sativus] >KGN48659.1 hypothetical protein Csa_003443 [Cucumis sativus])

HSP 1 Score: 554 bits (1428), Expect = 2.28e-198
Identity = 284/285 (99.65%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MEISSLKWISDWEIEDASPFMDEFHIDPFEFPLDALQFDDLYDLPVLPYAVEERPAKRVK 60
           MEISSLKWISDWEIEDASPFMDEFHIDPFEFPLDALQFDDLYDLPVLPYAVEERPAKRVK
Sbjct: 1   MEISSLKWISDWEIEDASPFMDEFHIDPFEFPLDALQFDDLYDLPVLPYAVEERPAKRVK 60

Query: 61  VEEDVEAGGGGINKCKTTFVGNNHKGDSSLSSSQIISFENNWNYESVKNWNCTNGKRSCS 120
           VEEDVEAGGGGINKCKTTFVGNNHKGDSSLSSSQIISFENNWNYESVKNWNCTNGKRSCS
Sbjct: 61  VEEDVEAGGGGINKCKTTFVGNNHKGDSSLSSSQIISFENNWNYESVKNWNCTNGKRSCS 120

Query: 121 MNGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQ 180
           MNGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQ
Sbjct: 121 MNGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQ 180

Query: 181 TTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIRI 240
           TTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIRI
Sbjct: 181 TTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIRI 240

Query: 241 HCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQV 285
           HCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQ+
Sbjct: 241 HCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQM 285

[Close]

BLAST of CsGy6G028920 vs. NCBI nr
Match: XP_008440466.1 (PREDICTED: transcription factor bHLH18-like [Cucumis melo])

HSP 1 Score: 479 bits (1234), Expect = 1.14e-168
Identity = 257/294 (87.41%), Postives = 270/294 (91.84%), Query Frame = 0


Query: 1   MEISSLKWISDWEIEDASPFMDEFHIDPFEFPLDALQFDDLYDLPVLPYAVEERPAKRVK 60
           MEISS+KWISDWEIEDASPFMDEF IDPFEF LDALQFDDLY+LPV PYAVEE+PAK+VK
Sbjct: 1   MEISSVKWISDWEIEDASPFMDEFKIDPFEFSLDALQFDDLYELPVPPYAVEEKPAKQVK 60

Query: 61  VE--EDVEAGGGGINKCKTTFVGNNHKG-DSSLSSS-QIISFENNWNYESVKNWNCTNGK 120
           VE  E+ +AG GGINKCKTTFVGNN+KG DSSLSSS +IISFENNWN+ESV NWN  NGK
Sbjct: 61  VEKEEEEQAGAGGINKCKTTFVGNNYKGRDSSLSSSSRIISFENNWNHESVNNWNSNNGK 120

Query: 121 RSCSMN-----GREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQ 180
           RSCSMN     GREHVIAERKRREKLSQRFIALSALIP LNK DKASILGGAIRHVKELQ
Sbjct: 121 RSCSMNRNAMNGREHVIAERKRREKLSQRFIALSALIPGLNKVDKASILGGAIRHVKELQ 180

Query: 181 ERLKVVEEQTTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRF 240
           ERLK VEEQTTSKTS+PQ PVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIE RF
Sbjct: 181 ERLKGVEEQTTSKTSEPQVPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEARF 240

Query: 241 VNNDVLIRIHCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQV 285
           +NNDVLIRIHCHKRKGCLSYLLN+IQS NNLTILNT ALPFSHSNLDITIVAQ+
Sbjct: 241 LNNDVLIRIHCHKRKGCLSYLLNRIQSLNNLTILNTCALPFSHSNLDITIVAQM 294

[Close]

BLAST of CsGy6G028920 vs. NCBI nr
Match: XP_038883438.1 (transcription factor bHLH18-like [Benincasa hispida])

HSP 1 Score: 310 bits (793), Expect = 1.96e-101
Identity = 197/322 (61.18%), Postives = 221/322 (68.63%), Query Frame = 0


Query: 1   MEISSLKWISDWEIEDASPFMDEFHIDPFEFPLDALQFD----------DLYDLPVLPYA 60
           MEISS +WIS+WEIED   FMDEF +DPF+F LD  +F+          D Y+ PV P A
Sbjct: 1   MEISSARWISEWEIEDPPSFMDEFKVDPFDFSLDEFKFEEYSGGSWSGTDFYESPVPPSA 60

Query: 61  VEERPAKRVKVEEDVEAGGGGINKCKTTFVGNNHKGDSSLSSSQIISFENNWN------- 120
           V ERP K++KV  D     GGI KC+  F GN +K DSS S+SQIISFEN  N       
Sbjct: 61  VTERPTKQLKVAVD-----GGI-KCQI-FDGN-YKADSSSSTSQIISFENFSNSKCGKGS 120

Query: 121 --------YESV-----------KNWN-CTNGKRSCSMNGREHVIAERKRREKLSQRFIA 180
                   YESV           K+W  C++      ++ REHVIAERKRREKLSQRFIA
Sbjct: 121 VGAKIEMDYESVNISESYWNNNEKSWKKCSSSMNRNPLHAREHVIAERKRREKLSQRFIA 180

Query: 181 LSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQTTSKTSKPQSPVVCVKRTTLQPS 240
           LSALIP LNK DKASILGGAIRHVKELQERLKVVEEQ  SK S+ QS   CVKRT+LQ S
Sbjct: 181 LSALIPGLNKVDKASILGGAIRHVKELQERLKVVEEQPNSKMSEAQS-TACVKRTSLQVS 240

Query: 241 SSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIRIHCHKRKGCLSYLLNKIQSFNNLT 285
           S DD+   SD+NSF+G     PEIE RF N DVLIRIHC KRKGCLSYLLNKI++ NNLT
Sbjct: 241 SPDDE---SDDNSFTGGP--APEIEARFSNKDVLIRIHCQKRKGCLSYLLNKIENLNNLT 300

[Close]

BLAST of CsGy6G028920 vs. NCBI nr
Match: KAA0036377.1 (transcription factor bHLH18-like [Cucumis melo var. makuwa] >TYK12771.1 transcription factor bHLH18-like [Cucumis melo var. makuwa])

HSP 1 Score: 291 bits (746), Expect = 2.52e-96
Identity = 154/166 (92.77%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 120 SMNGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEE 179
           +MNGREHVIAERKRREKLSQRFIALSALIP LNK DKASILGGAIRHVKELQERLK VEE
Sbjct: 5   AMNGREHVIAERKRREKLSQRFIALSALIPGLNKVDKASILGGAIRHVKELQERLKGVEE 64

Query: 180 QTTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIR 239
           QTTSKTS+PQ PVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIE RF+NNDVLIR
Sbjct: 65  QTTSKTSEPQVPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEARFLNNDVLIR 124

Query: 240 IHCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQV 285
           IHCHKRKGCLSYLLN+IQS NNLTILNT ALPFSHSNLDITIVAQ+
Sbjct: 125 IHCHKRKGCLSYLLNRIQSLNNLTILNTCALPFSHSNLDITIVAQM 170

[Close]

BLAST of CsGy6G028920 vs. NCBI nr
Match: XP_023004094.1 (transcription factor bHLH19-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 261 bits (667), Expect = 2.99e-82
Identity = 174/329 (52.89%), Postives = 202/329 (61.40%), Query Frame = 0


Query: 1   MEISSLKWISDWEIEDASPFMDEFHIDPFEFPLDALQFD-----DLYDLPVLPYAVEERP 60
           MEISS KW+S+WE+EDA  FMDEF + PFEF  D ++F+     D Y     P AV ER 
Sbjct: 1   MEISSTKWVSEWEMEDAPYFMDEFQVHPFEFSFDEMKFEENGRRDFYGSTDPPSAVAERV 60

Query: 61  AKRVKVEEDVEAGGGGINKCKTTFVGNNHKGDSSLSSSQIISFEN--------------- 120
            K++ VE  VE  G        T  G   K DSS SSS IISFE                
Sbjct: 61  VKQLMVE--VEGKG-------ATSQGFAPKADSSSSSSHIISFEKLNCKAGKGCDVKGSV 120

Query: 121 ------------NWNYESV--KNWNCTNGKRSCS----------MNGREHVIAERKRREK 180
                       N N+ ++  ++WN    ++              + REHV+AERKRREK
Sbjct: 121 EPKIEMAYEYDGNLNFSTLITESWNNEYSRQGVQKAAGSANRNPFHAREHVLAERKRREK 180

Query: 181 LSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQTTSKTSKPQSPVVCVK 240
           LSQRFIALSALIP LNK DKASILGGA+R+VKELQERLKVVEEQ        +   V VK
Sbjct: 181 LSQRFIALSALIPGLNKIDKASILGGAVRYVKELQERLKVVEEQAAISEVSEEQSTVYVK 240

Query: 241 RTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIRIHCHKRKGCLSYLLNKI 285
           R +   SS DDDT SS+ENSFSGR    PEIE R  N DVLIRIHCHKRKGCLSYLL KI
Sbjct: 241 RRSPVSSSDDDDTISSEENSFSGRP--VPEIEARVSNKDVLIRIHCHKRKGCLSYLLGKI 300

[Close]

BLAST of CsGy6G028920 vs. ExPASy TrEMBL
Match: A0A0A0KIM8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G497100 PE=4 SV=1)

HSP 1 Score: 554 bits (1428), Expect = 1.10e-198
Identity = 284/285 (99.65%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MEISSLKWISDWEIEDASPFMDEFHIDPFEFPLDALQFDDLYDLPVLPYAVEERPAKRVK 60
           MEISSLKWISDWEIEDASPFMDEFHIDPFEFPLDALQFDDLYDLPVLPYAVEERPAKRVK
Sbjct: 1   MEISSLKWISDWEIEDASPFMDEFHIDPFEFPLDALQFDDLYDLPVLPYAVEERPAKRVK 60

Query: 61  VEEDVEAGGGGINKCKTTFVGNNHKGDSSLSSSQIISFENNWNYESVKNWNCTNGKRSCS 120
           VEEDVEAGGGGINKCKTTFVGNNHKGDSSLSSSQIISFENNWNYESVKNWNCTNGKRSCS
Sbjct: 61  VEEDVEAGGGGINKCKTTFVGNNHKGDSSLSSSQIISFENNWNYESVKNWNCTNGKRSCS 120

Query: 121 MNGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQ 180
           MNGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQ
Sbjct: 121 MNGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQ 180

Query: 181 TTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIRI 240
           TTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIRI
Sbjct: 181 TTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIRI 240

Query: 241 HCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQV 285
           HCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQ+
Sbjct: 241 HCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQM 285

[Close]

BLAST of CsGy6G028920 vs. ExPASy TrEMBL
Match: A0A1S3B172 (transcription factor bHLH18-like OS=Cucumis melo OX=3656 GN=LOC103484895 PE=4 SV=1)

HSP 1 Score: 479 bits (1234), Expect = 5.51e-169
Identity = 257/294 (87.41%), Postives = 270/294 (91.84%), Query Frame = 0


Query: 1   MEISSLKWISDWEIEDASPFMDEFHIDPFEFPLDALQFDDLYDLPVLPYAVEERPAKRVK 60
           MEISS+KWISDWEIEDASPFMDEF IDPFEF LDALQFDDLY+LPV PYAVEE+PAK+VK
Sbjct: 1   MEISSVKWISDWEIEDASPFMDEFKIDPFEFSLDALQFDDLYELPVPPYAVEEKPAKQVK 60

Query: 61  VE--EDVEAGGGGINKCKTTFVGNNHKG-DSSLSSS-QIISFENNWNYESVKNWNCTNGK 120
           VE  E+ +AG GGINKCKTTFVGNN+KG DSSLSSS +IISFENNWN+ESV NWN  NGK
Sbjct: 61  VEKEEEEQAGAGGINKCKTTFVGNNYKGRDSSLSSSSRIISFENNWNHESVNNWNSNNGK 120

Query: 121 RSCSMN-----GREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQ 180
           RSCSMN     GREHVIAERKRREKLSQRFIALSALIP LNK DKASILGGAIRHVKELQ
Sbjct: 121 RSCSMNRNAMNGREHVIAERKRREKLSQRFIALSALIPGLNKVDKASILGGAIRHVKELQ 180

Query: 181 ERLKVVEEQTTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRF 240
           ERLK VEEQTTSKTS+PQ PVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIE RF
Sbjct: 181 ERLKGVEEQTTSKTSEPQVPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEARF 240

Query: 241 VNNDVLIRIHCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQV 285
           +NNDVLIRIHCHKRKGCLSYLLN+IQS NNLTILNT ALPFSHSNLDITIVAQ+
Sbjct: 241 LNNDVLIRIHCHKRKGCLSYLLNRIQSLNNLTILNTCALPFSHSNLDITIVAQM 294

[Close]

BLAST of CsGy6G028920 vs. ExPASy TrEMBL
Match: A0A5A7T477 (Transcription factor bHLH18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003600 PE=4 SV=1)

HSP 1 Score: 291 bits (746), Expect = 1.22e-96
Identity = 154/166 (92.77%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 120 SMNGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEE 179
           +MNGREHVIAERKRREKLSQRFIALSALIP LNK DKASILGGAIRHVKELQERLK VEE
Sbjct: 5   AMNGREHVIAERKRREKLSQRFIALSALIPGLNKVDKASILGGAIRHVKELQERLKGVEE 64

Query: 180 QTTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIR 239
           QTTSKTS+PQ PVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIE RF+NNDVLIR
Sbjct: 65  QTTSKTSEPQVPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEARFLNNDVLIR 124

Query: 240 IHCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQV 285
           IHCHKRKGCLSYLLN+IQS NNLTILNT ALPFSHSNLDITIVAQ+
Sbjct: 125 IHCHKRKGCLSYLLNRIQSLNNLTILNTCALPFSHSNLDITIVAQM 170

[Close]

BLAST of CsGy6G028920 vs. ExPASy TrEMBL
Match: A0A6J1KV88 (transcription factor bHLH19-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497507 PE=4 SV=1)

HSP 1 Score: 261 bits (667), Expect = 1.45e-82
Identity = 174/329 (52.89%), Postives = 202/329 (61.40%), Query Frame = 0


Query: 1   MEISSLKWISDWEIEDASPFMDEFHIDPFEFPLDALQFD-----DLYDLPVLPYAVEERP 60
           MEISS KW+S+WE+EDA  FMDEF + PFEF  D ++F+     D Y     P AV ER 
Sbjct: 1   MEISSTKWVSEWEMEDAPYFMDEFQVHPFEFSFDEMKFEENGRRDFYGSTDPPSAVAERV 60

Query: 61  AKRVKVEEDVEAGGGGINKCKTTFVGNNHKGDSSLSSSQIISFEN--------------- 120
            K++ VE  VE  G        T  G   K DSS SSS IISFE                
Sbjct: 61  VKQLMVE--VEGKG-------ATSQGFAPKADSSSSSSHIISFEKLNCKAGKGCDVKGSV 120

Query: 121 ------------NWNYESV--KNWNCTNGKRSCS----------MNGREHVIAERKRREK 180
                       N N+ ++  ++WN    ++              + REHV+AERKRREK
Sbjct: 121 EPKIEMAYEYDGNLNFSTLITESWNNEYSRQGVQKAAGSANRNPFHAREHVLAERKRREK 180

Query: 181 LSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQTTSKTSKPQSPVVCVK 240
           LSQRFIALSALIP LNK DKASILGGA+R+VKELQERLKVVEEQ        +   V VK
Sbjct: 181 LSQRFIALSALIPGLNKIDKASILGGAVRYVKELQERLKVVEEQAAISEVSEEQSTVYVK 240

Query: 241 RTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIRIHCHKRKGCLSYLLNKI 285
           R +   SS DDDT SS+ENSFSGR    PEIE R  N DVLIRIHCHKRKGCLSYLL KI
Sbjct: 241 RRSPVSSSDDDDTISSEENSFSGRP--VPEIEARVSNKDVLIRIHCHKRKGCLSYLLGKI 300

[Close]

BLAST of CsGy6G028920 vs. ExPASy TrEMBL
Match: A0A6J1HEG9 (transcription factor bHLH19-like OS=Cucurbita moschata OX=3662 GN=LOC111463455 PE=4 SV=1)

HSP 1 Score: 253 bits (646), Expect = 1.57e-79
Identity = 176/330 (53.33%), Postives = 199/330 (60.30%), Query Frame = 0


Query: 1   MEISSLKWISDWEIEDASPFMDEFHIDPFEFPLDALQFD-----DLYDLPVLPYAVEERP 60
           MEISS KW+S+WE+EDA  FMDEF ++PFEF  D ++F+     D Y    LP AV+   
Sbjct: 1   MEISSTKWVSEWEMEDAPYFMDEFQVNPFEFSFDEMKFEENGRSDFYGSTDLPSAVK--- 60

Query: 61  AKRVKVEEDVEAGGGGINKCKTTFVGNNHKGDSSLSSSQIISFEN--------------- 120
                    VE  G        T  G   K DSS SSS IISFE                
Sbjct: 61  ---------VEGKG-------ATSQGFAPKADSSSSSSHIISFEKLNCKAGKGCDVKGSV 120

Query: 121 ----NWNYESVKN----------WNCTNGKRSCS----------MNGREHVIAERKRREK 180
                  YES +N          WN    ++              + REHV+AERKRREK
Sbjct: 121 EPKIEMAYESDRNLNFSTLITESWNNEYSRQGAKKAAGSVNRNPFHAREHVLAERKRREK 180

Query: 181 LSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQTT-SKTSKPQSPVVCV 240
           LSQRFIALSALIP LNK DKASIL GA+R+VKELQERLKVVEEQ   SK S+ QS V  V
Sbjct: 181 LSQRFIALSALIPGLNKIDKASILSGAVRYVKELQERLKVVEEQAAISKVSEEQSTVY-V 240

Query: 241 KRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIRIHCHKRKGCLSYLLNK 285
           KR +   SS DDDT SS+ENSFSGR    PEIE R  N DVL RIHCHKRKGCLSYLL K
Sbjct: 241 KRRSPASSSDDDDTISSEENSFSGRP--VPEIEARVSNKDVLFRIHCHKRKGCLSYLLGK 300

[Close]

BLAST of CsGy6G028920 vs. TAIR 10
Match: AT2G22750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 1.0e-29
Identity = 84/169 (49.70%), Postives = 111/169 (65.68%), Query Frame = 0


Query: 122 NGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQT 181
           N ++H++AERKRREKL+QRF+ALSALIP L K DKAS+LG AI+H+K LQE +K  EEQ 
Sbjct: 123 NAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQ- 182

Query: 182 TSKTSKPQSPVVCVKRTTL------QPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNND 241
             K  K    VV VK+++L      QPSSS   +S  + NS S  L   PEIEVR    D
Sbjct: 183 --KKEKTMESVVLVKKSSLVLDENHQPSSS--SSSDGNRNSSSSNL---PEIEVRVSGKD 242

Query: 242 VLIRIHCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQ 285
           VLI+I C K+KG +  ++ +I+    L+I N++ LPF     DI+I+AQ
Sbjct: 243 VLIKILCEKQKGNVIKIMGEIEKL-GLSITNSNVLPFG-PTFDISIIAQ 281

[Close]

BLAST of CsGy6G028920 vs. TAIR 10
Match: AT2G22750.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 1.0e-29
Identity = 84/169 (49.70%), Postives = 111/169 (65.68%), Query Frame = 0


Query: 122 NGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQT 181
           N ++H++AERKRREKL+QRF+ALSALIP L K DKAS+LG AI+H+K LQE +K  EEQ 
Sbjct: 123 NAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQ- 182

Query: 182 TSKTSKPQSPVVCVKRTTL------QPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNND 241
             K  K    VV VK+++L      QPSSS   +S  + NS S  L   PEIEVR    D
Sbjct: 183 --KKEKTMESVVLVKKSSLVLDENHQPSSS--SSSDGNRNSSSSNL---PEIEVRVSGKD 242

Query: 242 VLIRIHCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQ 285
           VLI+I C K+KG +  ++ +I+    L+I N++ LPF     DI+I+AQ
Sbjct: 243 VLIKILCEKQKGNVIKIMGEIEKL-GLSITNSNVLPFG-PTFDISIIAQ 281

[Close]

BLAST of CsGy6G028920 vs. TAIR 10
Match: AT4G37850.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 5.1e-29
Identity = 79/163 (48.47%), Postives = 111/163 (68.10%), Query Frame = 0


Query: 122 NGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHVKELQERLKVVEEQT 181
           N ++H+IAERKRREKL+QRF+ALSAL+P L K DKAS+LG A++H+K LQER+  +EEQ 
Sbjct: 149 NAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQ- 208

Query: 182 TSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEIEVRFVNNDVLIRIH 241
             K  +    +V VK++ L    ++   SSS E+ FS      PEIEVRF + DVLI+I 
Sbjct: 209 --KKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSD--LDLPEIEVRFSDEDVLIKIL 268

Query: 242 CHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQ 285
           C K+KG L+ ++ +I+   ++ I N+S L F    LDITI+A+
Sbjct: 269 CEKQKGHLAKIMAEIEKL-HILITNSSVLNFG-PTLDITIIAK 304

[Close]

BLAST of CsGy6G028920 vs. TAIR 10
Match: AT2G22770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 8.6e-29
Identity = 96/264 (36.36%), Postives = 144/264 (54.55%), Query Frame = 0


Query: 53  ERPAKRVKVEEDVEAGGGGINKCKTTFVGNNHKGDSSLSSSQIISF----------ENNW 112
           ERP K++K            N   +T    +    S   +SQ+ISF          E + 
Sbjct: 50  ERPTKQMKTN----------NNMNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVETSL 109

Query: 113 NYESVKNWNCTNG--KRSCSMNG--------REHVIAERKRREKLSQRFIALSALIPDLN 172
           N+ +  + +   G  ++ C  NG        +EHV+AERKRR+KL++R IALSAL+P L 
Sbjct: 110 NFSNQVSMDQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLK 169

Query: 173 KADKASILGGAIRHVKELQERLKVVEEQTTSKTSKPQSPVVCVKRTTL---QPSSSDDDT 232
           K DKA++L  AI+H+K+LQER+K +EE+    T K    ++ VKR+ +     SSS   T
Sbjct: 170 KTDKATVLEDAIKHLKQLQERVKKLEEERV-VTKKMDQSIILVKRSQVYLDDDSSSYSST 229

Query: 233 --------SSSDENSFSGRLRSTPEIEVRFVNNDVLIRIHCHKRKGCLSYLLNKIQSFNN 286
                   SSSDE S     ++ P IE R  + D+LIR+HC K KGC+  +L+ ++ F  
Sbjct: 230 CSAASPLSSSSDEVSIF--KQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKF-R 289

[Close]

BLAST of CsGy6G028920 vs. TAIR 10
Match: AT2G22760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.5e-28
Identity = 79/178 (44.38%), Postives = 113/178 (63.48%), Query Frame = 0


Query: 108 KNWNCTNGKRSCSMNGREHVIAERKRREKLSQRFIALSALIPDLNKADKASILGGAIRHV 167
           K   C++G RS  +  +EHV+AERKRREKLS++FIALSAL+P L KADK +IL  AI  +
Sbjct: 103 KRKTCSHGTRS-PVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRM 162

Query: 168 KELQERLKVVEEQTTSKTSKPQSPVVCVKRTTLQPSSSDDDTSSSDENSFSGRLRSTPEI 227
           K+LQE+L+ ++E+  + T + +S ++  K         +   S S    F    ++ PEI
Sbjct: 163 KQLQEQLRTLKEEKEA-TRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFD---QALPEI 222

Query: 228 EVRFVNNDVLIRIHCHKRKGCLSYLLNKIQSFNNLTILNTSALPFSHSNLDITIVAQV 286
           E +   ND+LIRI C K KGC+  +LN I++F  L I N+  LPF  S LDIT++AQ+
Sbjct: 223 EAKISQNDILIRILCEKSKGCMINILNTIENF-QLRIENSIVLPFGDSTLDITVLAQM 274

The following BLAST results are available for this feature:

BLAST of CsGy6G028920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1PF17	1.4e-28	49.70	Transcription factor bHLH18 OS=Arabidopsis thaliana OX=3702 GN=BHLH18 PE=1 SV=1	[more]
Q9T072	7.1e-28	48.47	Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2	[more]
Q8S3F1	1.2e-27	36.36	Transcription factor NAI1 OS=Arabidopsis thaliana OX=3702 GN=NAI1 PE=2 SV=1	[more]
Q1PF16	3.5e-27	44.38	Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1	[more]
A0A3Q7ELQ2	8.4e-13	37.50	Transcription factor MTB1 OS=Solanum lycopersicum OX=4081 GN=MTB1 PE=1 SV=1	[more]

BLAST of CsGy6G028920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657919.2	2.28e-198	99.65	transcription factor bHLH19 [Cucumis sativus] >KGN48659.1 hypothetical protein C...	[more]
XP_008440466.1	1.14e-168	87.41	PREDICTED: transcription factor bHLH18-like [Cucumis melo]	[more]
XP_038883438.1	1.96e-101	61.18	transcription factor bHLH18-like [Benincasa hispida]	[more]
KAA0036377.1	2.52e-96	92.77	transcription factor bHLH18-like [Cucumis melo var. makuwa] >TYK12771.1 transcri...	[more]
XP_023004094.1	2.99e-82	52.89	transcription factor bHLH19-like isoform X1 [Cucurbita maxima]	[more]

BLAST of CsGy6G028920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIM8	1.10e-198	99.65	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G497100 PE=4 S...	[more]
A0A1S3B172	5.51e-169	87.41	transcription factor bHLH18-like OS=Cucumis melo OX=3656 GN=LOC103484895 PE=4 SV...	[more]
A0A5A7T477	1.22e-96	92.77	Transcription factor bHLH18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1KV88	1.45e-82	52.89	transcription factor bHLH19-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1HEG9	1.57e-79	53.33	transcription factor bHLH19-like OS=Cucurbita moschata OX=3662 GN=LOC111463455 P...	[more]

BLAST of CsGy6G028920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22750.1	1.0e-29	49.70	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22750.2	1.0e-29	49.70	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G37850.1	5.1e-29	48.47	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22770.1	8.6e-29	36.36	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G22760.1	2.5e-28	44.38	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 160..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..219
None	No IPR available	PANTHER	PTHR45959:SF36	TRANSCRIPTION FACTOR NAI1	coord: 31..285
None	No IPR available	PANTHER	PTHR45959	BHLH TRANSCRIPTION FACTOR	coord: 31..285
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 127..176 e-value: 8.2E-14 score: 61.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 125..171 e-value: 1.1E-9 score: 38.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 121..170 score: 14.532054
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 117..185 e-value: 1.9E-13 score: 52.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 126..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G028920.2	CsGy6G028920.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity