CsGy6G008130 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G008130
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionMajor pollen allergen Ole e 6-like
LocationGy14Chr6: 6814884 .. 6815631 (-)
RNA-Seq ExpressionCsGy6G008130
SyntenyCsGy6G008130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTAGTTTAACCTTCTATATCGGCTTAAATTTCTTAGTGAAGAATCTATTTTTAGGATTACAAGAAGGCTATAAAGCAACATTCTCATCTTCTCAAACATTCATCCACTTGCCAAAGGGAGCACTTCGATAGACGCTAAATCCAAAGTGATTTTTAAAAGCGTCACCAAAGGCAAGTAAAAACCCACATAAAAAATAATAATGGCCAAGAAGATTGTTGCAGTGTTTTTTATGTGCATTGTAGTGATGGCTTCTTTGCAATTTGGCAATGCCACCAACGAAGAGGTTAAGAAATATGAGGCTAAATATGAGGCCAAATATGTGTCTTGCTATGAAAATTGTTTGAGGATATGCCTTGCAAGGCTCAGCGGCCGAGGCTACTGCGAAGTTAAATGTGACGAAGATTGCGAAGAGAAAGAAGTTGCTGGTACTACCCAAATTCATCTCTATTTTAATTTTAAAACCTCATTTTTTATTCTATTTAGAGTTTAATTTTAATTATTTTCTTGGATTAATTTTGAATTGTTGTATGATTGTTTTACAGAGAAGTTGCACATCCAAATCAAGCACTGATAATAATGGGGGAATTAAAGGAAAAATAAGTGCTCTCATGCATGGAGGATCAATGAGAGAGCTATATCATTGTATTGAAATTGAGTTCATGTGAGGGGAGTTTATGATGATAAACCCTCCTTTCTATACAATCATATGATTCTATTTATAATGAACTTTCTTTCTTTAATTTTTTG

mRNA sequence

CTTAGTTTAACCTTCTATATCGGCTTAAATTTCTTAGTGAAGAATCTATTTTTAGGATTACAAGAAGGCTATAAAGCAACATTCTCATCTTCTCAAACATTCATCCACTTGCCAAAGGGAGCACTTCGATAGACGCTAAATCCAAAGTGATTTTTAAAAGCGTCACCAAAGGCAAGTAAAAACCCACATAAAAAATAATAATGGCCAAGAAGATTGTTGCAGTGTTTTTTATGTGCATTGTAGTGATGGCTTCTTTGCAATTTGGCAATGCCACCAACGAAGAGGTTAAGAAATATGAGGCTAAATATGAGGCCAAATATGTGTCTTGCTATGAAAATTGTTTGAGGATATGCCTTGCAAGGCTCAGCGGCCGAGGCTACTGCGAAGTTAAATGTGACGAAGATTGCGAAGAGAAAGAAGTTGCTGAGAAGTTGCACATCCAAATCAAGCACTGATAATAATGGGGGAATTAAAGGAAAAATAAGTGCTCTCATGCATGGAGGATCAATGAGAGAGCTATATCATTGTATTGAAATTGAGTTCATGTGAGGGGAGTTTATGATGATAAACCCTCCTTTCTATACAATCATATGATTCTATTTATAATGAACTTTCTTTCTTTAATTTTTTG

Coding sequence (CDS)

ATGGCCAAGAAGATTGTTGCAGTGTTTTTTATGTGCATTGTAGTGATGGCTTCTTTGCAATTTGGCAATGCCACCAACGAAGAGGTTAAGAAATATGAGGCTAAATATGAGGCCAAATATGTGTCTTGCTATGAAAATTGTTTGAGGATATGCCTTGCAAGGCTCAGCGGCCGAGGCTACTGCGAAGTTAAATGTGACGAAGATTGCGAAGAGAAAGAAGTTGCTGAGAAGTTGCACATCCAAATCAAGCACTGA

Protein sequence

MAKKIVAVFFMCIVVMASLQFGNATNEEVKKYEAKYEAKYVSCYENCLRICLARLSGRGYCEVKCDEDCEEKEVAEKLHIQIKH*
Homology
BLAST of CsGy6G008130 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 5.6e-05
Identity = 19/42 (45.24%), Postives = 28/42 (66.67%), Query Frame = 0

Query: 37 EAKYVSCYENCLRICLARLSGRGYCEVKCDEDCEEKEVAEKL 79
          EA++  CY+ C + C  + +G  +CE+KCD DC  K+V EKL
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKL 43

BLAST of CsGy6G008130 vs. NCBI nr
Match: XP_004140523.2 (major pollen allergen Ole e 6 [Cucumis sativus] >KGN46485.1 hypothetical protein Csa_005747 [Cucumis sativus])

HSP 1 Score: 175 bits (443), Expect = 3.89e-55
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0

Query: 1  MAKKIVAVFFMCIVVMASLQFGNATNEEVKKYEAKYEAKYVSCYENCLRICLARLSGRGY 60
          MAKKIVAVFFMCIVVMASLQFGNATNEEVKKYEAKYEAKYVSCYENCLRICLARLSGRGY
Sbjct: 1  MAKKIVAVFFMCIVVMASLQFGNATNEEVKKYEAKYEAKYVSCYENCLRICLARLSGRGY 60

Query: 61 CEVKCDEDCEEKEVAEKLHIQIKH 84
          CEVKCDEDCEEKEVAEKLHIQIKH
Sbjct: 61 CEVKCDEDCEEKEVAEKLHIQIKH 84

BLAST of CsGy6G008130 vs. NCBI nr
Match: KAA0039794.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYK24703.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 142 bits (357), Expect = 5.17e-42
Identity = 66/83 (79.52%), Postives = 77/83 (92.77%), Query Frame = 0

Query: 1  MAKKIVAVFFMCIVVMASLQFGNATNEE-VKKYEAKYEAKYVSCYENCLRICLARLSGRG 60
          MAKKI+AVF MCIVVMASLQFGNATNEE VKKYEAK++ KYVSC+ NC+R+CLARL GRG
Sbjct: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60

Query: 61 YCEVKCDEDCEEKEVAEKLHIQI 82
          YC+VKC+EDCEEKEVA+KL+I +
Sbjct: 61 YCQVKCEEDCEEKEVADKLNIPL 83

BLAST of CsGy6G008130 vs. NCBI nr
Match: XP_038906482.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 122 bits (305), Expect = 4.17e-34
Identity = 57/83 (68.67%), Postives = 69/83 (83.13%), Query Frame = 0

Query: 1  MAKKIVAVFFMCIVVMASLQFGNATNEEVKKYEAKYEAKYVSCYENCLRICLARLSGRGY 60
          MAKKI+A+F MCIVVM +LQFG A NEEV KYEAK+EAKY SCYE C + CL   +G+ +
Sbjct: 1  MAKKIIAMFLMCIVVMGALQFGTA-NEEVDKYEAKFEAKYKSCYETCEKECLQNSNGQSF 60

Query: 61 CEVKCDEDCEEKEVAEKLHIQIK 83
          CEVKCDEDC+EKEVA+KLHI ++
Sbjct: 61 CEVKCDEDCDEKEVADKLHIGLR 82

BLAST of CsGy6G008130 vs. NCBI nr
Match: XP_038906677.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 121 bits (304), Expect = 5.92e-34
Identity = 57/82 (69.51%), Postives = 69/82 (84.15%), Query Frame = 0

Query: 1  MAKKIVAVFFMCIVVMASLQFGNATNEEVKKYEAKYEAKYVSCYENCLRICLARLSGRGY 60
          MAKKI+AVFFMCIVVMA+ QF  A NEEV+KYEAK+EAKY SCYE C + CL   +G+ +
Sbjct: 1  MAKKIIAVFFMCIVVMAAFQFATA-NEEVEKYEAKFEAKYKSCYETCEKECLEGGNGQSF 60

Query: 61 CEVKCDEDCEEKEVAEKLHIQI 82
          CEVKCDEDC+EKE A+KLHI++
Sbjct: 61 CEVKCDEDCDEKETADKLHIEL 81

BLAST of CsGy6G008130 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 121 bits (304), Expect = 6.09e-34
Identity = 55/82 (67.07%), Postives = 69/82 (84.15%), Query Frame = 0

Query: 1  MAKKIVAVFFMCIVVMASLQFGNATNEEVKKYEAKYEAKYVSCYENCLRICLARLSGRGY 60
          MAKK++AVF MCIVV+A+LQF  A  +EV KYEAK++AKY SCYE C + CLA  SG+ +
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLANGSGQSF 60

Query: 61 CEVKCDEDCEEKEVAEKLHIQI 82
          CEVKCDEDC+EKEVA+KLHI++
Sbjct: 61 CEVKCDEDCDEKEVADKLHIKL 82

BLAST of CsGy6G008130 vs. ExPASy TrEMBL
Match: A0A0A0K9T2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G101980 PE=4 SV=1)

HSP 1 Score: 175 bits (443), Expect = 1.88e-55
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0

Query: 1  MAKKIVAVFFMCIVVMASLQFGNATNEEVKKYEAKYEAKYVSCYENCLRICLARLSGRGY 60
          MAKKIVAVFFMCIVVMASLQFGNATNEEVKKYEAKYEAKYVSCYENCLRICLARLSGRGY
Sbjct: 1  MAKKIVAVFFMCIVVMASLQFGNATNEEVKKYEAKYEAKYVSCYENCLRICLARLSGRGY 60

Query: 61 CEVKCDEDCEEKEVAEKLHIQIKH 84
          CEVKCDEDCEEKEVAEKLHIQIKH
Sbjct: 61 CEVKCDEDCEEKEVAEKLHIQIKH 84

BLAST of CsGy6G008130 vs. ExPASy TrEMBL
Match: A0A5D3DM34 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002600 PE=4 SV=1)

HSP 1 Score: 142 bits (357), Expect = 2.50e-42
Identity = 66/83 (79.52%), Postives = 77/83 (92.77%), Query Frame = 0

Query: 1  MAKKIVAVFFMCIVVMASLQFGNATNEE-VKKYEAKYEAKYVSCYENCLRICLARLSGRG 60
          MAKKI+AVF MCIVVMASLQFGNATNEE VKKYEAK++ KYVSC+ NC+R+CLARL GRG
Sbjct: 1  MAKKIIAVFVMCIVVMASLQFGNATNEEEVKKYEAKFDVKYVSCFANCMRVCLARLGGRG 60

Query: 61 YCEVKCDEDCEEKEVAEKLHIQI 82
          YC+VKC+EDCEEKEVA+KL+I +
Sbjct: 61 YCQVKCEEDCEEKEVADKLNIPL 83

BLAST of CsGy6G008130 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 117 bits (294), Expect = 9.87e-33
Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 0

Query: 1  MAKKIVAVFFMCIVVMASLQFGNATNEEVKKYEAKYEAKYVSCYENCLRICLARLSGRGY 60
          MA K++A+F MCIVV+A+LQF NA  E+V KYEAK++AKY SC+E C + CL   SG+ Y
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSY 60

Query: 61 CEVKCDEDCEEKEVAEKLHIQI 82
          CEVKCDEDC+EKE A+KLHI++
Sbjct: 61 CEVKCDEDCDEKEAADKLHIEL 82

BLAST of CsGy6G008130 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 114 bits (285), Expect = 2.39e-31
Identity = 53/83 (63.86%), Postives = 68/83 (81.93%), Query Frame = 0

Query: 1  MAKKIVAVFFMCIVVMASLQFGNATNE-EVKKYEAKYEAKYVSCYENCLRICLARLSGRG 60
          MAKK++A+F MCIVV+A+LQF +A  E EV KYEAK++AKY SC++ C + CL   SG+ 
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 YCEVKCDEDCEEKEVAEKLHIQI 82
          YCEVKCDEDC EKEVA+KLHI++
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

BLAST of CsGy6G008130 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 114 bits (285), Expect = 2.39e-31
Identity = 53/83 (63.86%), Postives = 68/83 (81.93%), Query Frame = 0

Query: 1  MAKKIVAVFFMCIVVMASLQFGNATNE-EVKKYEAKYEAKYVSCYENCLRICLARLSGRG 60
          MAKK++A+F MCIVV+A+LQF +A  E EV KYEAK++AKY SC++ C + CL   SG+ 
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 YCEVKCDEDCEEKEVAEKLHIQI 82
          YCEVKCDEDC EKEVA+KLHI++
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O241725.6e-0545.24Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_004140523.23.89e-55100.00major pollen allergen Ole e 6 [Cucumis sativus] >KGN46485.1 hypothetical protein... [more]
KAA0039794.15.17e-4279.52major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYK24703.1 major ... [more]
XP_038906482.14.17e-3468.67major pollen allergen Ole e 6-like [Benincasa hispida][more]
XP_038906677.15.92e-3469.51major pollen allergen Ole e 6-like [Benincasa hispida][more]
XP_038891517.16.09e-3467.07major pollen allergen Ole e 6-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A0A0K9T21.88e-55100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G101980 PE=4 SV=1[more]
A0A5D3DM342.50e-4279.52Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A0A0KPA79.87e-3363.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1[more]
A0A5D3BCS22.39e-3163.86Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C5302.39e-3163.86major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036466Pollen allergen ole e 6 superfamilyGENE3D1.10.287.720Pollen allergen ole e 6coord: 36..83
e-value: 7.1E-13
score: 49.9
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 37..78
IPR015333Pollen allergen ole e 6PFAMPF09253Ole_e_6coord: 43..79
e-value: 2.4E-9
score: 37.0
IPR015333Pollen allergen ole e 6PANTHERPTHR35632MAJOR POLLEN ALLERGEN OLE E 6-LIKEcoord: 1..83
NoneNo IPR availablePANTHERPTHR35632:SF5SUBFAMILY NOT NAMEDcoord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G008130.2CsGy6G008130.2mRNA