CsGy5G027950 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G027950
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Ribosomal RNA small subunit methyltransferase D
Location	Gy14Chr5: 31657358 .. 31661148 (-)
RNA-Seq Expression	CsGy5G027950
Synteny	CsGy5G027950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCTTCGCTCCCGGTTCTTTCTTCATTGAGCGCCAGCGCTAACATCTCTGATGTTACCTCGTTTTCGCTGAATAGCCCACTCAGTAATATCTGTTCCAAACCGAGCGCTCATCCTTCGTCTTCTATCATCGTTTGTTCTTACAGTGAGTTCCTGTATTTTGTTGCATTTTTTTATTTCCATGTAAATGAACTTTCAATTGTGTATTGGTTTCAGAATCTGGCAACCATACGGTGACAGAGCGGAAAAAGAAGTTGTTGGAGCAATATGGACTTGATCCTAACGAGTTTTTGTCTGAACCTTCCACTAATGTTGGTTCTCCTTCTCTTTGATGATTGTTATTTATAATTTCTTGTCAATCCGAATGGTTTGGAGATGAGTGACTGGCATTGTATTCGTTTTTTCTGTTTGAATTTGTGCAATTACACTTTATCGGCTTCGGAATTGAGTGTTTGGATACTTGGTAATGCTTAATTTTTCTTTATTGTAATCTTTGATTTTCCTTATAGCGAAGAAGAGAAATGCGAAAAACGGGAAAAGGCAAGCAAATTTTTCCGGAGGATCCTAAACCTCAACGACAAACTCACAAGTTACTTCAGGTACGAGTTGTGTTCCTTTTTCCATTTTGTTTGGTGCTTTGCGTTGTGATAATTCATTAGTCTATCTTCCTAAGTAGAGGATGCATCCTTCAGAGGAGATATGTACCGCTCTCTGCTTCAGAGATTACTTCTTCAAAATTTCGAAGTAAAGTGAAAGGGAGAGAAATGATTGTAAAACTTTTCTTACAAGGTCGTTGAACAAATACTTTATTTGGATTCTCCCTCTTGAATATGAATATAAACAAATTGAAATCTAGTATTAGTTTGGTTCTTTAAGTTGATTGAATAATCTTATTTTGAATTCATTCCAGTCAGATCTACATCAAGTTAATCATTTTCAATTGGCCAATTGCCAAATTGAAAACTGAAATACTGATTTTAGTTTTGAGAGAATATTGCGTCTGTTGGTAGAATTTGTCATGTCGATGATAACCATGGATCCTCCAGCGCCTACACATAACGTGTATCACAGATATTTGGGAAGTATAGTAAAAAGATTCCATGCTTTTCTTTAAAAAATAACTCAACAAATATGTTGGCTACCTAACTCAGGTGCTTGGAGGAAGTGCTCGGAGAATGAAGCTACTCTCACCAAAGGGGTTGGATGTACGACCAATGATGGAAGTTGTGAAAGGTGCAGCTTTTGATATTTTGCAGGTTGGAGTTGATTTTAAATATTAGTTTCTTTCACTTTACCAGATCATTCGGTTATGATTCAGAGTTTGTAGATTTCTAGTTTAAGAGCTCATTTGGTAGAGCATATTATATGGTCGTACTTTTCTTGGGTAGGTTGCTGTTAGCCATCCTGTCACAGAAAAAAAGGTCTAATATAATTTGGAAATGCAGGCTGCTGGTGGATGTCCAGCATCTTTAAGGCCTGGTCGTTGGTTAGACTTGTATAGTGGTACCGGATCAGTTGGTATTGAAGCTATGAGCCGTGGATGTTCCGAGGTATGAGTTCATTTGAGAATTTAGTTTGGGCTAACATTTTCTGTAATTTTTAAAAACAACCAACTGATTATAGCTTTCTAACTAATTACGCTTGGATAGGAATTGGCTTGATATACATAATTATTAATTTCAGGATACTTATTCTGTATATCTCTTTTTCTTTTTCTCCTACGTCTAATGTACTTCAACTTCCAGGTGCATTTTGTTGAGATGGATCCATGGGTTGTTTCTGATGTTCTAAGGCCAAATCTGGAATCTACTGGGTTTTTTGATGTTTCGGTCATTCACACAATCCGGGTTGAGAATTTTATAGAACGAGCTGACCAACTTATTGGTATCCCAACTAAACTTTAGTTTTCTCCTTGTTTCTTGTCTCATCCTAAGACTCATTGGCACAAACATGAGCATTGGGTACACTAAGGGTTCTATAGTTTGAGATTGTTGTAGTTTTTAAAATATTTGCTGACAATTGTGATTTTTAGACAAATCAATTGAGACCTGAATTTATTTAGTGTTTGGAAAAAGTCAATTAAAAAACTTGAAAAACGAAAAAACATATTATTATGTTTGGTAAATTTCCGTTAAAATGTCTTGATTTAGCTCTAATGACCCACTTAACATATTATTTTAATAATTTTTATTTTGATATTTAATATCTAATGTATTATAAGATAAATATGTAAAAGTTTATATGATTTAAATTAGGAGTAATGTTGTTTAATTGAAGTCATTTGATAAAATTTAAGAAAATAATTTTTATAAAAATTGAAGCAATCAAATTTTGTTGATTCTGGAAGGAATAGATTTGAAAAGAAAAATGATATATGGAAGTGTACAATTTAACTTTTTAAATTTGTTAGAGGAGACAGAGAATCTTTAGGAAAGTAGATTTCAAAATATGATGTCTATGTGATTTTGCAGATGGAGTCAAATGAGAAGTGATTTTGGAATTAAATAACCAGTTTTATCAAGCAACTTAGTGTGTTTTGGAATACATTCTCAAGTGTTTAATTTAAAAATGAGTTATTATGGAAAAAATTAAAGTGTTCGGCAACCGCTTAAAATAGATTTTGAAGTGTATTTTAAATGGGTTTTTATTAAAAAAGTTTAAATAAAATTGAGTCTTTTGGAAAACAGTTTTCAATCCAAATGGGAGGTTAGATTGTTGAACTTGCATTAACTATAAATGAAAATGGGAAATGTAAATGGTCCTGCTTATCTCACCTTGGTAGGAATAGAGAATCGGTAAAATCAAACAAATTCTCATTTTTGTTTAAGAATTAATGGTAGTGGCATCAATTTCTTTTGGTACAGTACTGTAATTCAATTGAACGTATAAGCTTCTATAATTTTTTATTTAAAGACTACCAATTATTGTGCCTAAGTATATTGTCTTGCGTAGGTACTGAAAGACCATTTGATTACATTAGTGTTACCCCACCGTACACACAAGTTGATTATGGGGTACTCATGGGGCAACTGTCAAAGTCGGCCTTAGTTGGAGAAGATACCTTCATTGTAAGTTGTATTTTTCTTGTTCCTATTTAAATATCCAAATCTTCTTTATGTAAAACCTACTTTATTTAGATCAGGAAAAGTGTACGGTTTTACGAAACCATATGCTTTGCTCGAATTCGTAGTTAATCCTATATTTTTTAAATATGGTTTACCTTCCTTTCTCTGACTTTGATCTTTGTGATCTAGGTGGTTGAATATCCATTGAGGACTGACATGCTGGAATCTTGTGGATGCCTTACTAAGGTAATTTAATCATGTGGATATTTTACATTCACAATGTTATGAATGAATAAAATCAAATTATTAATTGGACCAAATTGTATTTCACCTGATGGAATTTAGTGAGAAGGTACGGTATGGATACTGGGAAACTATATCTTTTGTAACTGGGGGTCAAGTTTAATGTAGTCTGTAATGTAACAACACTATGAGTAATTTCTCAACAAGGCACTTGAAAATTTTATATCTACAAGAAGAGATCAAGGGTCCAAAATCTTACTAATTTCTGTAGCTGCTTTCTTTGTATTTTTTTTTAATATGTGGACATGGGATCATCATCTAAGGAGAATTATTTAGATTTTTACTCCTAATGTCTTTACCTATTGAGTAACAAGTATAATTGTGCAGATTACTGACCGGAGGTTTGGTCGGACACACTTGGCAATTTATGGACCCAAGTGGGCTGAGAAGAAAAAGAAGGAAAAAAAATTAAATTAG

mRNA sequence

ATGGCGGTTTCTTCGCTCCCGGTTCTTTCTTCATTGAGCGCCAGCGCTAACATCTCTGATGTTACCTCGTTTTCGCTGAATAGCCCACTCAGTAATATCTGTTCCAAACCGAGCGCTCATCCTTCGTCTTCTATCATCGTTTGTTCTTACAAATCTGGCAACCATACGGTGACAGAGCGGAAAAAGAAGTTGTTGGAGCAATATGGACTTGATCCTAACGAGTTTTTGTCTGAACCTTCCACTAATCGAAGAAGAGAAATGCGAAAAACGGGAAAAGGCAAGCAAATTTTTCCGGAGGATCCTAAACCTCAACGACAAACTCACAAGTTACTTCAGGTGCTTGGAGGAAGTGCTCGGAGAATGAAGCTACTCTCACCAAAGGGGTTGGATGTACGACCAATGATGGAAGTTGTGAAAGGTGCAGCTTTTGATATTTTGCAGGCTGCTGGTGGATGTCCAGCATCTTTAAGGCCTGGTCGTTGGTTAGACTTGTATAGTGGTACCGGATCAGTTGGTATTGAAGCTATGAGCCGTGGATGTTCCGAGGTGCATTTTGTTGAGATGGATCCATGGGTTGTTTCTGATGTTCTAAGGCCAAATCTGGAATCTACTGGGTTTTTTGATGTTTCGGTCATTCACACAATCCGGGTTGAGAATTTTATAGAACGAGCTGACCAACTTATTGGTACTGAAAGACCATTTGATTACATTAGTGTTACCCCACCGTACACACAAGTTGATTATGGGGTACTCATGGGGCAACTGTCAAAGTCGGCCTTAGTTGGAGAAGATACCTTCATTGTGGTTGAATATCCATTGAGGACTGACATGCTGGAATCTTGTGGATGCCTTACTAAGATTACTGACCGGAGGTTTGGTCGGACACACTTGGCAATTTATGGACCCAAGTGGGCTGAGAAGAAAAAGAAGGAAAAAAAATTAAATTAG

Coding sequence (CDS)

ATGGCGGTTTCTTCGCTCCCGGTTCTTTCTTCATTGAGCGCCAGCGCTAACATCTCTGATGTTACCTCGTTTTCGCTGAATAGCCCACTCAGTAATATCTGTTCCAAACCGAGCGCTCATCCTTCGTCTTCTATCATCGTTTGTTCTTACAAATCTGGCAACCATACGGTGACAGAGCGGAAAAAGAAGTTGTTGGAGCAATATGGACTTGATCCTAACGAGTTTTTGTCTGAACCTTCCACTAATCGAAGAAGAGAAATGCGAAAAACGGGAAAAGGCAAGCAAATTTTTCCGGAGGATCCTAAACCTCAACGACAAACTCACAAGTTACTTCAGGTGCTTGGAGGAAGTGCTCGGAGAATGAAGCTACTCTCACCAAAGGGGTTGGATGTACGACCAATGATGGAAGTTGTGAAAGGTGCAGCTTTTGATATTTTGCAGGCTGCTGGTGGATGTCCAGCATCTTTAAGGCCTGGTCGTTGGTTAGACTTGTATAGTGGTACCGGATCAGTTGGTATTGAAGCTATGAGCCGTGGATGTTCCGAGGTGCATTTTGTTGAGATGGATCCATGGGTTGTTTCTGATGTTCTAAGGCCAAATCTGGAATCTACTGGGTTTTTTGATGTTTCGGTCATTCACACAATCCGGGTTGAGAATTTTATAGAACGAGCTGACCAACTTATTGGTACTGAAAGACCATTTGATTACATTAGTGTTACCCCACCGTACACACAAGTTGATTATGGGGTACTCATGGGGCAACTGTCAAAGTCGGCCTTAGTTGGAGAAGATACCTTCATTGTGGTTGAATATCCATTGAGGACTGACATGCTGGAATCTTGTGGATGCCTTACTAAGATTACTGACCGGAGGTTTGGTCGGACACACTTGGCAATTTATGGACCCAAGTGGGCTGAGAAGAAAAAGAAGGAAAAAAAATTAAATTAG

Protein sequence

MAVSSLPVLSSLSASANISDVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTERKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVTPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIYGPKWAEKKKKEKKLN*

Homology

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BLAST of CsGy5G027950 vs. ExPASy Swiss-Prot
Match: O34331 (Putative rRNA methyltransferase YlbH OS=Bacillus subtilis (strain 168) OX=224308 GN=ylbH PE=3 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 8.4e-14
Identity = 53/190 (27.89%), Postives = 91/190 (47.89%), Query Frame = 0


Query: 111 LQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGS 170
           ++V+ GS +   L +  G   RP  + VK + F+++            GR LDL++G+G 
Sbjct: 1   MRVISGSKKGRSLKAVAGTSTRPTTDKVKESIFNMI------GPYFDGGRGLDLFAGSGG 60

Query: 171 VGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGT 230
           +GIEA+SRG     FV+ D   +  V + NL++      + ++    E  +  A +    
Sbjct: 61  LGIEALSRGFEHCIFVDRDFKAIQTV-KSNLKTLELTKHAQVYRNDAERALHAAAK---R 120

Query: 231 ERPFDYISVTPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDR 290
           E  F  I + PPY +     L+  + +  ++ ED FIV E+    ++ E+ G L      
Sbjct: 121 ETGFRGIFLDPPYKEQKLKALLTLIDEYQMLEEDGFIVAEHDREVELPETVGDLVMTRKE 180

Query: 291 RFGRTHLAIY 301
            +G T +AIY
Sbjct: 181 TYGLTGVAIY 180

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BLAST of CsGy5G027950 vs. ExPASy Swiss-Prot
Match: P57136 (Ribosomal RNA small subunit methyltransferase D OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=rsmD PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.5e-05
Identity = 34/160 (21.25%), Postives = 76/160 (47.50%), Query Frame = 0


Query: 111 LQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGS 170
           + ++ G+ +  K+      ++RP    ++   F+ L         ++  R LD ++G+G 
Sbjct: 12  IYIISGNLKGRKISFKNIPNLRPTTNQIRETLFEWLS------KYIKNSRCLDCFAGSGV 71

Query: 171 VGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGT 230
           +GIEA+SR  +    +E++       L+ N++    ++V +I T    +++++       
Sbjct: 72  LGIEAISRYAAFSTLLEIEKKTFL-TLKKNIKELNIYNVEIIRT-NTLHWLKKT-----R 131

Query: 231 ERPFDYISVTPPYTQVDYGVLMGQLSKSALVGEDTFIVVE 271
            +P+D I + PPY Q      +  L     + +++FI +E
Sbjct: 132 NKPYDIIFIDPPYHQGLVKKTINLLENKKWIKKNSFIYIE 158

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BLAST of CsGy5G027950 vs. ExPASy Swiss-Prot
Match: P0ADY0 (Ribosomal RNA small subunit methyltransferase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=rsmD PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.5e-05
Identity = 41/169 (24.26%), Postives = 77/169 (45.56%), Query Frame = 0


Query: 102 KPQRQTHKLLQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRW 161
           KP       ++++GG  R  KL  P    +RP  + V+   F+ L         +   + 
Sbjct: 3   KPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPV------IVDAQC 62

Query: 162 LDLYSGTGSVGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFI 221
           LD ++G+G++G+EA+SR  +    +EMD   VS  L  NL +    +  V+++  +    
Sbjct: 63  LDCFAGSGALGLEALSRYAAGATLIEMDR-AVSQQLIKNLATLKAGNARVVNSNAMSFLA 122

Query: 222 ERADQLIGTERPFDYISVTPPYTQVDYGVLMGQLSKSALVGEDTFIVVE 271
           ++     GT  P + + V PP+ +      +  L  +  + ++  I VE
Sbjct: 123 QK-----GT--PHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVE 157

[Close]

BLAST of CsGy5G027950 vs. ExPASy Swiss-Prot
Match: P0ADX9 (Ribosomal RNA small subunit methyltransferase D OS=Escherichia coli (strain K12) OX=83333 GN=rsmD PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.5e-05
Identity = 41/169 (24.26%), Postives = 77/169 (45.56%), Query Frame = 0


Query: 102 KPQRQTHKLLQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRW 161
           KP       ++++GG  R  KL  P    +RP  + V+   F+ L         +   + 
Sbjct: 3   KPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPV------IVDAQC 62

Query: 162 LDLYSGTGSVGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFI 221
           LD ++G+G++G+EA+SR  +    +EMD   VS  L  NL +    +  V+++  +    
Sbjct: 63  LDCFAGSGALGLEALSRYAAGATLIEMDR-AVSQQLIKNLATLKAGNARVVNSNAMSFLA 122

Query: 222 ERADQLIGTERPFDYISVTPPYTQVDYGVLMGQLSKSALVGEDTFIVVE 271
           ++     GT  P + + V PP+ +      +  L  +  + ++  I VE
Sbjct: 123 QK-----GT--PHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVE 157

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BLAST of CsGy5G027950 vs. ExPASy Swiss-Prot
Match: Q9ZD05 (Uncharacterized methylase RP545 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=RP545 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.6e-04
Identity = 46/229 (20.09%), Postives = 94/229 (41.05%), Query Frame = 0


Query: 110 LLQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAG--GCPASLRPGRWLDLYSG 169
           +L+++ G  +   + + + +  RP    +K A F IL +    G        + LDL++G
Sbjct: 1   MLKIISGKYKNQIIPTAQNIKYRPSTGKLKEAIFSILTSGEFIGNKLFNENTQILDLFAG 60

Query: 170 TGSVGIEAMSRGCSEVHFVEMDPW----VVSDVLRPNLE-STGFFDVSVIHTIRV----- 229
           +GS+  E++SRG      +++D +            N+E +  F +++ ++  +      
Sbjct: 61  SGSLAFESLSRGAGFATLIDIDTYSLKIAAGFAKSLNIENNVHFININALNLQKTTRYLS 120

Query: 230 -----ENFIERADQLIG----------------------TERPFDYISVTPPYTQVDYGV 289
                  FI  A+  IG                      + + FD + + PPY +     
Sbjct: 121 KQTDRNEFITTAESYIGISKHKSTNITYKLPLKEQFCNMSNKVFDLVFIDPPYNKDIVPK 180

Query: 290 LMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAI 300
           +M  L K+  +   T IV+E   +TD  +    +  I  + +G++ L +
Sbjct: 181 VMKLLIKNNWLKNGTIIVIEMS-KTDDYDLDKNIEIIRAKLYGQSKLLV 228

[Close]

BLAST of CsGy5G027950 vs. NCBI nr
Match: XP_004148680.1 (uncharacterized protein LOC101209883 [Cucumis sativus] >XP_031741881.1 uncharacterized protein LOC101209883 [Cucumis sativus] >KGN52426.1 hypothetical protein Csa_007850 [Cucumis sativus])

HSP 1 Score: 622 bits (1604), Expect = 1.48e-224
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MAVSSLPVLSSLSASANISDVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTER 60
           MAVSSLPVLSSLSASANISDVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTER
Sbjct: 1   MAVSSLPVLSSLSASANISDVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTER 60

Query: 61  KKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSARR 120
           KKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSARR
Sbjct: 61  KKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSARR 120

Query: 121 MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC 180
           MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC
Sbjct: 121 MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC 180

Query: 181 SEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVT 240
           SEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVT
Sbjct: 181 SEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVT 240

Query: 241 PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIY 300
           PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIY
Sbjct: 241 PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIY 300

Query: 301 GPKWAEKKKKEKKLN 315
           GPKWAEKKKKEKKLN
Sbjct: 301 GPKWAEKKKKEKKLN 315

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BLAST of CsGy5G027950 vs. NCBI nr
Match: XP_008458705.1 (PREDICTED: putative rRNA methyltransferase YlbH [Cucumis melo] >KAA0037420.1 putative rRNA methyltransferase YlbH [Cucumis melo var. makuwa] >TYK00211.1 putative rRNA methyltransferase YlbH [Cucumis melo var. makuwa])

HSP 1 Score: 583 bits (1504), Expect = 2.40e-209
Identity = 297/312 (95.19%), Postives = 303/312 (97.12%), Query Frame = 0


Query: 1   MAVSSLPVLSSLSASANISDVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTER 60
           MAVSS PVLSSLSASANISDV+SFSL+SPL NICSK S+HPSSSIIVCSYKSGNHTV ER
Sbjct: 1   MAVSSFPVLSSLSASANISDVSSFSLSSPLINICSKSSSHPSSSIIVCSYKSGNHTVAER 60

Query: 61  KKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSARR 120
           KKKLLEQYGLDPNEFLSEPSTNRRRE+RKTGKGKQI  EDPKPQRQTHKLLQVLGGSARR
Sbjct: 61  KKKLLEQYGLDPNEFLSEPSTNRRREIRKTGKGKQISLEDPKPQRQTHKLLQVLGGSARR 120

Query: 121 MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC 180
           MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC
Sbjct: 121 MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC 180

Query: 181 SEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVT 240
           SEVHFVEMDPWVVSDVLRPNLESTGF DVSVIHTIRVENFIERADQLIGTE PFDYISVT
Sbjct: 181 SEVHFVEMDPWVVSDVLRPNLESTGFDDVSVIHTIRVENFIERADQLIGTETPFDYISVT 240

Query: 241 PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIY 300
           PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPL+TDML+SCGCLTKITDRRFGRTHLAIY
Sbjct: 241 PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLKTDMLDSCGCLTKITDRRFGRTHLAIY 300

Query: 301 GPKWAEKKKKEK 312
           GPKWAEKKKK K
Sbjct: 301 GPKWAEKKKKGK 312

[Close]

BLAST of CsGy5G027950 vs. NCBI nr
Match: XP_038890433.1 (putative rRNA methyltransferase YlbH [Benincasa hispida])

HSP 1 Score: 570 bits (1468), Expect = 7.92e-204
Identity = 290/314 (92.36%), Postives = 301/314 (95.86%), Query Frame = 0


Query: 1   MAVSSLPVLSSLSASANIS-DVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTE 60
           MAVSS PVLSSLSAS +IS DV+SFSLN PL NICSK + HPSSSIIVCSYKSGN+ VTE
Sbjct: 1   MAVSSFPVLSSLSASVSISPDVSSFSLNIPLVNICSKQTTHPSSSIIVCSYKSGNNAVTE 60

Query: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSAR 120
           R+K+LLEQYGLDPNEFLSEPSTNRRREMRKTG+GKQI  EDPKPQRQTHKLLQVLGGSAR
Sbjct: 61  RRKRLLEQYGLDPNEFLSEPSTNRRREMRKTGEGKQISAEDPKPQRQTHKLLQVLGGSAR 120

Query: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180
           RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG
Sbjct: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180

Query: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISV 240
           CSEVHFVEMDPWVVSDVLRPNLESTGFFD SVIHTIRVENFI+RA+QLIG +RPFDYISV
Sbjct: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFFDDSVIHTIRVENFIDRAEQLIGNDRPFDYISV 240

Query: 241 TPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAI 300
           TPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDML+SCGCL KITDRRFGRTHLAI
Sbjct: 241 TPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIKITDRRFGRTHLAI 300

Query: 301 YGPKWAEKKKKEKK 313
           YGPKWAEKKKKEKK
Sbjct: 301 YGPKWAEKKKKEKK 314

[Close]

BLAST of CsGy5G027950 vs. NCBI nr
Match: XP_022133703.1 (uncharacterized protein LOC111006220 [Momordica charantia])

HSP 1 Score: 538 bits (1387), Expect = 2.51e-191
Identity = 276/313 (88.18%), Postives = 291/313 (92.97%), Query Frame = 0


Query: 1   MAVSSLPVLSSLSASANIS-DVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTE 60
           MAVSS PVLSSLSASANIS DV+ +SLN PL NICS+ SAH SSS IVCSYKSG+  VT+
Sbjct: 1   MAVSSFPVLSSLSASANISADVSLYSLNLPLVNICSRLSAHQSSSTIVCSYKSGSEAVTD 60

Query: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSAR 120
           R+KKLLEQYGLDP+EFLSEPSTNRRRE+ K+GKGKQI   DPKPQR+THKLLQVLGGSAR
Sbjct: 61  RRKKLLEQYGLDPDEFLSEPSTNRRREVPKSGKGKQISAGDPKPQRETHKLLQVLGGSAR 120

Query: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180
           RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG
Sbjct: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180

Query: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISV 240
           CSEVHFVEMDPWVVSDVLRPNLESTGF DVSVIHTI VENFIERA Q IG + PFDYISV
Sbjct: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFLDVSVIHTIPVENFIERAKQFIGNDGPFDYISV 240

Query: 241 TPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAI 300
           TPPYTQVDYGVLMGQLS SALVGEDTFIVVEYPLRT+ML+SCGCL KITDRRFGRTHLAI
Sbjct: 241 TPPYTQVDYGVLMGQLSTSALVGEDTFIVVEYPLRTEMLDSCGCLIKITDRRFGRTHLAI 300

Query: 301 YGPKWAEKKKKEK 312
           YGPKWAEKKK++K
Sbjct: 301 YGPKWAEKKKRKK 313

[Close]

BLAST of CsGy5G027950 vs. NCBI nr
Match: XP_022993558.1 (putative rRNA methyltransferase YlbH isoform X4 [Cucurbita maxima])

HSP 1 Score: 511 bits (1315), Expect = 1.61e-180
Identity = 265/316 (83.86%), Postives = 286/316 (90.51%), Query Frame = 0


Query: 1   MAVSSLPVLSSLSASANIS----DVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHT 60
           MAVSS PVLSSL A +NIS    D + FSLN PL NICS+PS HPSSS IVCSYKS N +
Sbjct: 1   MAVSSFPVLSSLGARSNISVLDRDCSLFSLNIPLVNICSRPSTHPSSSTIVCSYKSEN-S 60

Query: 61  VTERKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGG 120
           V+ER+KKLLEQYGLDP+EFLSEPS NR REMRK+GK KQI  +DPK QR+THKLL+VLGG
Sbjct: 61  VSERRKKLLEQYGLDPDEFLSEPSANRAREMRKSGKDKQISGQDPKFQRKTHKLLKVLGG 120

Query: 121 SARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAM 180
           SARRM+LLSP GLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAM
Sbjct: 121 SARRMRLLSPIGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAM 180

Query: 181 SRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDY 240
           SRGCSEVHFVEMDPWVVSDVLRPNLESTGFFD SVIHTI VENFIERA+QLIG +RPFDY
Sbjct: 181 SRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDDSVIHTIPVENFIERAEQLIGNDRPFDY 240

Query: 241 ISVTPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTH 300
           ISVTPPY QVDYGV+M QLSKSALVGEDTFIVVEYPL+TDML+SCGCL +IT RRFGRT 
Sbjct: 241 ISVTPPYIQVDYGVVMEQLSKSALVGEDTFIVVEYPLKTDMLDSCGCLIQITKRRFGRTV 300

Query: 301 LAIYGPKWAEKKKKEK 312
           LAIYGPKWAEK+K++K
Sbjct: 301 LAIYGPKWAEKEKRKK 315

[Close]

BLAST of CsGy5G027950 vs. ExPASy TrEMBL
Match: A0A0A0KX89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633240 PE=4 SV=1)

HSP 1 Score: 622 bits (1604), Expect = 7.17e-225
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MAVSSLPVLSSLSASANISDVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTER 60
           MAVSSLPVLSSLSASANISDVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTER
Sbjct: 1   MAVSSLPVLSSLSASANISDVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTER 60

Query: 61  KKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSARR 120
           KKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSARR
Sbjct: 61  KKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSARR 120

Query: 121 MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC 180
           MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC
Sbjct: 121 MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC 180

Query: 181 SEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVT 240
           SEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVT
Sbjct: 181 SEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVT 240

Query: 241 PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIY 300
           PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIY
Sbjct: 241 PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIY 300

Query: 301 GPKWAEKKKKEKKLN 315
           GPKWAEKKKKEKKLN
Sbjct: 301 GPKWAEKKKKEKKLN 315

[Close]

BLAST of CsGy5G027950 vs. ExPASy TrEMBL
Match: A0A5D3BK68 (Putative rRNA methyltransferase YlbH OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1582G00020 PE=4 SV=1)

HSP 1 Score: 583 bits (1504), Expect = 1.16e-209
Identity = 297/312 (95.19%), Postives = 303/312 (97.12%), Query Frame = 0


Query: 1   MAVSSLPVLSSLSASANISDVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTER 60
           MAVSS PVLSSLSASANISDV+SFSL+SPL NICSK S+HPSSSIIVCSYKSGNHTV ER
Sbjct: 1   MAVSSFPVLSSLSASANISDVSSFSLSSPLINICSKSSSHPSSSIIVCSYKSGNHTVAER 60

Query: 61  KKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSARR 120
           KKKLLEQYGLDPNEFLSEPSTNRRRE+RKTGKGKQI  EDPKPQRQTHKLLQVLGGSARR
Sbjct: 61  KKKLLEQYGLDPNEFLSEPSTNRRREIRKTGKGKQISLEDPKPQRQTHKLLQVLGGSARR 120

Query: 121 MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC 180
           MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC
Sbjct: 121 MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC 180

Query: 181 SEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVT 240
           SEVHFVEMDPWVVSDVLRPNLESTGF DVSVIHTIRVENFIERADQLIGTE PFDYISVT
Sbjct: 181 SEVHFVEMDPWVVSDVLRPNLESTGFDDVSVIHTIRVENFIERADQLIGTETPFDYISVT 240

Query: 241 PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIY 300
           PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPL+TDML+SCGCLTKITDRRFGRTHLAIY
Sbjct: 241 PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLKTDMLDSCGCLTKITDRRFGRTHLAIY 300

Query: 301 GPKWAEKKKKEK 312
           GPKWAEKKKK K
Sbjct: 301 GPKWAEKKKKGK 312

[Close]

BLAST of CsGy5G027950 vs. ExPASy TrEMBL
Match: A0A1S3C8K7 (putative rRNA methyltransferase YlbH OS=Cucumis melo OX=3656 GN=LOC103498032 PE=4 SV=1)

HSP 1 Score: 583 bits (1504), Expect = 1.16e-209
Identity = 297/312 (95.19%), Postives = 303/312 (97.12%), Query Frame = 0


Query: 1   MAVSSLPVLSSLSASANISDVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTER 60
           MAVSS PVLSSLSASANISDV+SFSL+SPL NICSK S+HPSSSIIVCSYKSGNHTV ER
Sbjct: 1   MAVSSFPVLSSLSASANISDVSSFSLSSPLINICSKSSSHPSSSIIVCSYKSGNHTVAER 60

Query: 61  KKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSARR 120
           KKKLLEQYGLDPNEFLSEPSTNRRRE+RKTGKGKQI  EDPKPQRQTHKLLQVLGGSARR
Sbjct: 61  KKKLLEQYGLDPNEFLSEPSTNRRREIRKTGKGKQISLEDPKPQRQTHKLLQVLGGSARR 120

Query: 121 MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC 180
           MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC
Sbjct: 121 MKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGC 180

Query: 181 SEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISVT 240
           SEVHFVEMDPWVVSDVLRPNLESTGF DVSVIHTIRVENFIERADQLIGTE PFDYISVT
Sbjct: 181 SEVHFVEMDPWVVSDVLRPNLESTGFDDVSVIHTIRVENFIERADQLIGTETPFDYISVT 240

Query: 241 PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIY 300
           PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPL+TDML+SCGCLTKITDRRFGRTHLAIY
Sbjct: 241 PPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLKTDMLDSCGCLTKITDRRFGRTHLAIY 300

Query: 301 GPKWAEKKKKEK 312
           GPKWAEKKKK K
Sbjct: 301 GPKWAEKKKKGK 312

[Close]

BLAST of CsGy5G027950 vs. ExPASy TrEMBL
Match: A0A6J1BZW0 (uncharacterized protein LOC111006220 OS=Momordica charantia OX=3673 GN=LOC111006220 PE=4 SV=1)

HSP 1 Score: 538 bits (1387), Expect = 1.21e-191
Identity = 276/313 (88.18%), Postives = 291/313 (92.97%), Query Frame = 0


Query: 1   MAVSSLPVLSSLSASANIS-DVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTE 60
           MAVSS PVLSSLSASANIS DV+ +SLN PL NICS+ SAH SSS IVCSYKSG+  VT+
Sbjct: 1   MAVSSFPVLSSLSASANISADVSLYSLNLPLVNICSRLSAHQSSSTIVCSYKSGSEAVTD 60

Query: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSAR 120
           R+KKLLEQYGLDP+EFLSEPSTNRRRE+ K+GKGKQI   DPKPQR+THKLLQVLGGSAR
Sbjct: 61  RRKKLLEQYGLDPDEFLSEPSTNRRREVPKSGKGKQISAGDPKPQRETHKLLQVLGGSAR 120

Query: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180
           RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG
Sbjct: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180

Query: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISV 240
           CSEVHFVEMDPWVVSDVLRPNLESTGF DVSVIHTI VENFIERA Q IG + PFDYISV
Sbjct: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFLDVSVIHTIPVENFIERAKQFIGNDGPFDYISV 240

Query: 241 TPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAI 300
           TPPYTQVDYGVLMGQLS SALVGEDTFIVVEYPLRT+ML+SCGCL KITDRRFGRTHLAI
Sbjct: 241 TPPYTQVDYGVLMGQLSTSALVGEDTFIVVEYPLRTEMLDSCGCLIKITDRRFGRTHLAI 300

Query: 301 YGPKWAEKKKKEK 312
           YGPKWAEKKK++K
Sbjct: 301 YGPKWAEKKKRKK 313

[Close]

BLAST of CsGy5G027950 vs. ExPASy TrEMBL
Match: A0A6J1K2L6 (putative rRNA methyltransferase YlbH isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111489523 PE=4 SV=1)

HSP 1 Score: 511 bits (1315), Expect = 7.79e-181
Identity = 265/316 (83.86%), Postives = 286/316 (90.51%), Query Frame = 0


Query: 1   MAVSSLPVLSSLSASANIS----DVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHT 60
           MAVSS PVLSSL A +NIS    D + FSLN PL NICS+PS HPSSS IVCSYKS N +
Sbjct: 1   MAVSSFPVLSSLGARSNISVLDRDCSLFSLNIPLVNICSRPSTHPSSSTIVCSYKSEN-S 60

Query: 61  VTERKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGG 120
           V+ER+KKLLEQYGLDP+EFLSEPS NR REMRK+GK KQI  +DPK QR+THKLL+VLGG
Sbjct: 61  VSERRKKLLEQYGLDPDEFLSEPSANRAREMRKSGKDKQISGQDPKFQRKTHKLLKVLGG 120

Query: 121 SARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAM 180
           SARRM+LLSP GLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAM
Sbjct: 121 SARRMRLLSPIGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAM 180

Query: 181 SRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDY 240
           SRGCSEVHFVEMDPWVVSDVLRPNLESTGFFD SVIHTI VENFIERA+QLIG +RPFDY
Sbjct: 181 SRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDDSVIHTIPVENFIERAEQLIGNDRPFDY 240

Query: 241 ISVTPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTH 300
           ISVTPPY QVDYGV+M QLSKSALVGEDTFIVVEYPL+TDML+SCGCL +IT RRFGRT 
Sbjct: 241 ISVTPPYIQVDYGVVMEQLSKSALVGEDTFIVVEYPLKTDMLDSCGCLIQITKRRFGRTV 300

Query: 301 LAIYGPKWAEKKKKEK 312
           LAIYGPKWAEK+K++K
Sbjct: 301 LAIYGPKWAEKEKRKK 315

[Close]

BLAST of CsGy5G027950 vs. TAIR 10
Match: AT3G28460.1 (methyltransferases )

HSP 1 Score: 368.6 bits (945), Expect = 4.9e-102
Identity = 186/270 (68.89%), Postives = 217/270 (80.37%), Query Frame = 0


Query: 44  SIIVCSYK-SGNHTVTERKKKLLEQYGLDPN-EFLSEPSTNRRREMRKTGKGKQIFPEDP 103
           + +V S K SG    +E KK LLE+YG D N +F S+    RR+E + +G+  Q   E  
Sbjct: 44  TFVVSSRKNSGTGLASEDKKLLLERYGYDANDDFGSQSKKARRKEEKMSGRNSQQVEEVV 103

Query: 104 KPQ-RQTHKLLQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGR 163
             Q R TH+LLQVL G+A+R KLLS KG+DVRPMMEVVKGAAF ILQAAGGCP SLRPGR
Sbjct: 104 VVQPRTTHRLLQVLAGTAKRKKLLSLKGMDVRPMMEVVKGAAFGILQAAGGCPTSLRPGR 163

Query: 164 WLDLYSGTGSVGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENF 223
           WLDLYSGTGSVGIEA+SRGCSE HFVEMDPWVVS+VL+PNLE TGF D SVIHT RVENF
Sbjct: 164 WLDLYSGTGSVGIEAISRGCSEAHFVEMDPWVVSNVLQPNLEHTGFVDASVIHTARVENF 223

Query: 224 IERADQLIGTERPFDYISVTPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLES 283
           +ERAD+L+G +  FDYISVTPPY +VDY VLM Q++KS  +GE+TFI+VEYP RT ML+S
Sbjct: 224 LERADKLVGKDGVFDYISVTPPYMEVDYEVLMDQIAKSPAIGENTFILVEYPSRTTMLDS 283

Query: 284 CGCLTKITDRRFGRTHLAIYGPKWAEKKKK 311
           CGCL K+TDRRFGRTHLAIYGPKWA+K +K
Sbjct: 284 CGCLEKMTDRRFGRTHLAIYGPKWAQKPRK 313

The following BLAST results are available for this feature:

BLAST of CsGy5G027950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O34331	8.4e-14	27.89	Putative rRNA methyltransferase YlbH OS=Bacillus subtilis (strain 168) OX=224308...	[more]
P57136	2.5e-05	21.25	Ribosomal RNA small subunit methyltransferase D OS=Buchnera aphidicola subsp. Ac...	[more]
P0ADY0	2.5e-05	24.26	Ribosomal RNA small subunit methyltransferase D OS=Escherichia coli O6:H1 (strai...	[more]
P0ADX9	2.5e-05	24.26	Ribosomal RNA small subunit methyltransferase D OS=Escherichia coli (strain K12)...	[more]
Q9ZD05	3.6e-04	20.09	Uncharacterized methylase RP545 OS=Rickettsia prowazekii (strain Madrid E) OX=27...	[more]

BLAST of CsGy5G027950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148680.1	1.48e-224	100.00	uncharacterized protein LOC101209883 [Cucumis sativus] >XP_031741881.1 uncharact...	[more]
XP_008458705.1	2.40e-209	95.19	PREDICTED: putative rRNA methyltransferase YlbH [Cucumis melo] >KAA0037420.1 put...	[more]
XP_038890433.1	7.92e-204	92.36	putative rRNA methyltransferase YlbH [Benincasa hispida]	[more]
XP_022133703.1	2.51e-191	88.18	uncharacterized protein LOC111006220 [Momordica charantia]	[more]
XP_022993558.1	1.61e-180	83.86	putative rRNA methyltransferase YlbH isoform X4 [Cucurbita maxima]	[more]

BLAST of CsGy5G027950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX89	7.17e-225	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633240 PE=4 SV=1	[more]
A0A5D3BK68	1.16e-209	95.19	Putative rRNA methyltransferase YlbH OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C8K7	1.16e-209	95.19	putative rRNA methyltransferase YlbH OS=Cucumis melo OX=3656 GN=LOC103498032 PE=...	[more]
A0A6J1BZW0	1.21e-191	88.18	uncharacterized protein LOC111006220 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1K2L6	7.79e-181	83.86	putative rRNA methyltransferase YlbH isoform X4 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsGy5G027950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28460.1	4.9e-102	68.89	methyltransferases	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 100..312 e-value: 1.8E-41 score: 143.5
None	No IPR available	PFAM	PF03602	Cons_hypoth95	coord: 111..300 e-value: 1.0E-45 score: 155.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..103
None	No IPR available	PANTHER	PTHR43542:SF1	METHYLTRANSFERASE	coord: 30..312
None	No IPR available	PANTHER	PTHR43542	METHYLTRANSFERASE	coord: 30..312
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 160..243 e-value: 0.00945285 score: 33.5575
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 111..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G027950.2	CsGy5G027950.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008168	methyltransferase activity