CsGy5G026555 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G026555
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr5: 30408118 .. 30408775 (-)
RNA-Seq ExpressionCsGy5G026555
SyntenyCsGy5G026555
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGCGAGCCATACTGACAGTGGACTCCCAACGACCTCTACCGCGCCCATCAATTTTCCACTTCCTTCGATCTCATTTTCCTCTCGAAATCCTCAATTTCCCAATCGGATGTGGTATTCTCTTTTCTTCCTCGACCCCTCTATCTATCAATTCTTCACTGTTTCATGAAACTGTTCCAATTGTAGTCCACTGTGTAAGTTTTCCCCTGTTTTCCTTTTGCAATCATTACCTCAACTCTCGGATCTTTGTTTTTATTTGAAGAAATATTTGACGCTATTACGGTATCGGTAGAGCTGGGTCTATGTTTTTTTTTTTTTTTTCACTATGTAACATGCAATTTCTTCATGTTTGTTTCACTGTATGCGTTGTGGCTGTGCCTACTGGTTTGCTTAAGGCGATCATGGACGATTAGATTTGGAATTTTGCTTCTGACTATATTTTATTGAGATGTAGCTCTAAGCTGAAGAATGAGGGAGGCAATGAATCTGTCGTTTGATGCTGTGTTTTTTATATTATGCATCGAATGCACATTTTTTTTTCTATGCCTTTGTTATGAATCAATTTTCAGTTTATGAACTAGTGAATCAATTTGGAGATATCTTACTGACTGCAGTTCCCTTGATTTCTGTCCCCTGCAGACGTTTTCATTGTGTTAG

mRNA sequence

ATGACGCGAGCCATACTGACAGTGGACTCCCAACGACCTCTACCGCGCCCATCAATTTTCCACTTCCTTCGATCTCATTTTCCTCTCGAAATCCTCAATTTCCCAATCGGATGTGGTATTCTCTTTTCTTCCTCGACCCCTCTATCTATCAATTCTTCACTGTTTCATGAAACTGTTCCAATTGTAGTCCACTGTACGTTTTCATTGTGTTAG

Coding sequence (CDS)

ATGACGCGAGCCATACTGACAGTGGACTCCCAACGACCTCTACCGCGCCCATCAATTTTCCACTTCCTTCGATCTCATTTTCCTCTCGAAATCCTCAATTTCCCAATCGGATGTGGTATTCTCTTTTCTTCCTCGACCCCTCTATCTATCAATTCTTCACTGTTTCATGAAACTGTTCCAATTGTAGTCCACTGTACGTTTTCATTGTGTTAG

Protein sequence

MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVPIVVHCTFSLC*
Homology
[Close]
BLAST of CsGy5G026555 vs. NCBI nr
Match: KGN52270.1 (hypothetical protein Csa_009078 [Cucumis sativus])

HSP 1 Score: 147 bits (372), Expect = 9.88e-45
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 1  MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVP 60
          MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVP
Sbjct: 1  MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVP 60

Query: 61 IVVHCTFSLC 70
          IVVHCTFSLC
Sbjct: 61 IVVHCTFSLC 70

[Close]
BLAST of CsGy5G026555 vs. ExPASy TrEMBL
Match: A0A0A0KRJ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622850 PE=4 SV=1)

HSP 1 Score: 147 bits (372), Expect = 4.78e-45
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 1  MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVP 60
          MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVP
Sbjct: 1  MTRAILTVDSQRPLPRPSIFHFLRSHFPLEILNFPIGCGILFSSSTPLSINSSLFHETVP 60

Query: 61 IVVHCTFSLC 70
          IVVHCTFSLC
Sbjct: 61 IVVHCTFSLC 70

The following BLAST results are available for this feature:
BLAST of CsGy5G026555 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy5G026555 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52270.19.88e-45100.00hypothetical protein Csa_009078 [Cucumis sativus][more]
BLAST of CsGy5G026555 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRJ74.78e-45100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G622850 PE=4 SV=1[more]
BLAST of CsGy5G026555 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G026555.1CsGy5G026555.1mRNA