CsGy5G021250 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTCTGATCATTCATACCTACTTTTCCGATGTGGATGCTCACCTTAGAACCATAAAAATACAAGCTCGCGTGTAGAGATACACACAAATCATTAGATGCTTCTAGGAGGTGTAGTTGATATATTCAATATAGAAAATAGAGGATAATTCTGTTGGATGGCTCAAATTTCTGGAGAGATCTAGAACGAAAGGAGGTTCCAGTTCTTTCCATCTCCAGACCCTCCTTCTCCATCCTTTAATAACTTCAACAATGGCGATTTTCTCATCACCTAAACGTTCCTTAACACAATCCTCATTCCTACTACTTCCTCCAACTCAATTCGAACTTCACATTTCTCTTTTAGTCCACAGATTCCTACATAATCCACAAAGTTCTGTTTGAATGGCTCAAGCTGTATCAAATCTGACTCGATTCGTCTGCTTCACTCCTACCAAAGCCTCCAATGATCCCAAGAAGTTTGTTCGTAAAAGTAGCGTCAAAGCCGTGAGAGGGGATGGCAGAGAGAATCTCGATCACTTACAGAGAACTATCGAAAAGGAAAAACAAACAGCTCAGCCACCGAAGAAACGAGTAGCTCCTGTTGCTCCAATTGGTAATTGATCTGACCTTATTGCTGGTTAAAATTAATGGGCAACTCTTCTTTTTGGTTTTGGTTTGATTTTGTTTTTTGTTTGTGTTCGTTTTTTCTAGGGCTTTGGGATCGATTTCCGACGGCGAGAACTGTACAGCAAATGATGGAGACAATGGAGAGGATAATGGATGATCCTTTTGCTTACTCGGGAGCATGGCCATCGCCTCCATTTACCAGCGATGGTGCTGGGTACAGTAGGGGAAGAACTCCATGGGAGATCAAGGAAGGGGAAAATGAGTATAAGATGAGGTTTGACATGCCGGGTATGACGAAGGACGATGTGAAGGTGTGGGTGGAGGAGAAGATGTTGGTTGTGAAGGCTGAGAAGGCTGAGAAGGTGAAGAAGGCTAGTGAAGAAAATGGGAAGGTTGAAGAAGAAGAGGGAGATTGGTCTGCTAAAAGCTATGGGAGATACAGTAGCAGAATTGCTTTGCCTGAGAATGTTCAATTTGAGCAGATTAAGGCAGAGGTAAAAGATGGGGTTTTGTACATAACAATACCAAAGGCTATGGCTACAAGTAAAATTGTGGACATTAATGTCCAGTGAAGAGTTGAGATTAGATTTCGAGAGTAGGTGTAGTTATTTTTTTATCTGCTTTCAGTTTCAAAAGAACCTGATGTAAACAGTTATGAAGATGAAGTTCTTGCAATTTCATCCTGGCTTTTGTAATCTATTTTCAACAAAGCTTCGATGTAAACATTTGGCATTACTGATGGAATGATACCTTTAGTTACCTGTTAAACGCAACTGCTTTGAATTTTGTTTTAAGAGAACTGGTTCATCAGAATTTTGAAGAACCGTGGTTCCTTCTGTTATTGTCTGGATTGAATATTAGTAGCTGAAACGTTACTTCAGGAGTTATGTTCTTACTTTCTTGCTTTCAGAGAACCAAGCTCAACATGAAAGCCATGTAGTTTTAGAGAGATGAATCAGAATGCCAACCTTCAGGT AAATTCTGATCATTCATACCTACTTTTCCGATGTGGATGCTCACCTTAGAACCATAAAAATACAAGCTCGCGTGTAGAGATACACACAAATCATTAGATGCTTCTAGGAGGTGTAGTTGATATATTCAATATAGAAAATAGAGGATAATTCTGTTGGATGGCTCAAATTTCTGGAGAGATCTAGAACGAAAGGAGGTTCCAGTTCTTTCCATCTCCAGACCCTCCTTCTCCATCCTTTAATAACTTCAACAATGGCGATTTTCTCATCACCTAAACGTTCCTTAACACAATCCTCATTCCTACTACTTCCTCCAACTCAATTCGAACTTCACATTTCTCTTTTAGTCCACAGATTCCTACATAATCCACAAAGTTCTGTTTGAATGGCTCAAGCTGTATCAAATCTGACTCGATTCGTCTGCTTCACTCCTACCAAAGCCTCCAATGATCCCAAGAAGTTTGTTCGTAAAAGTAGCGTCAAAGCCGTGAGAGGGGATGGCAGAGAGAATCTCGATCACTTACAGAGAACTATCGAAAAGGAAAAACAAACAGCTCAGCCACCGAAGAAACGAGTAGCTCCTGTTGCTCCAATTGGGCTTTGGGATCGATTTCCGACGGCGAGAACTGTACAGCAAATGATGGAGACAATGGAGAGGATAATGGATGATCCTTTTGCTTACTCGGGAGCATGGCCATCGCCTCCATTTACCAGCGATGGTGCTGGGTACAGTAGGGGAAGAACTCCATGGGAGATCAAGGAAGGGGAAAATGAGTATAAGATGAGGTTTGACATGCCGGGTATGACGAAGGACGATGTGAAGGTGTGGGTGGAGGAGAAGATGTTGGTTGTGAAGGCTGAGAAGGCTGAGAAGGTGAAGAAGGCTAGTGAAGAAAATGGGAAGGTTGAAGAAGAAGAGGGAGATTGGTCTGCTAAAAGCTATGGGAGATACAGTAGCAGAATTGCTTTGCCTGAGAATGTTCAATTTGAGCAGATTAAGGCAGAGGTAAAAGATGGGGTTTTGTACATAACAATACCAAAGGCTATGGCTACAAGTAAAATTGTGGACATTAATGTCCAGTGAAGAGTTGAGATTAGATTTCGAGAGTAGGTGTAGTTATTTTTTTATCTGCTTTCAGTTTCAAAAGAACCTGATGTAAACAGTTATGAAGATGAAGTTCTTGCAATTTCATCCTGGCTTTTGTAATCTATTTTCAACAAAGCTTCGATGTAAACATTTGGCATTACTGATGGAATGATACCTTTAGTTACCTGTTAAACGCAACTGCTTTGAATTTTGTTTTAAGAGAACTGGTTCATCAGAATTTTGAAGAACCGTGGTTCCTTCTGTTATTGTCTGGATTGAATATTAGTAGCTGAAACGTTACTTCAGGAGTTATGTTCTTACTTTCTTGCTTTCAGAGAACCAAGCTCAACATGAAAGCCATGTAGTTTTAGAGAGATGAATCAGAATGCCAACCTTCAGGT ATGGCTCAAGCTGTATCAAATCTGACTCGATTCGTCTGCTTCACTCCTACCAAAGCCTCCAATGATCCCAAGAAGTTTGTTCGTAAAAGTAGCGTCAAAGCCGTGAGAGGGGATGGCAGAGAGAATCTCGATCACTTACAGAGAACTATCGAAAAGGAAAAACAAACAGCTCAGCCACCGAAGAAACGAGTAGCTCCTGTTGCTCCAATTGGGCTTTGGGATCGATTTCCGACGGCGAGAACTGTACAGCAAATGATGGAGACAATGGAGAGGATAATGGATGATCCTTTTGCTTACTCGGGAGCATGGCCATCGCCTCCATTTACCAGCGATGGTGCTGGGTACAGTAGGGGAAGAACTCCATGGGAGATCAAGGAAGGGGAAAATGAGTATAAGATGAGGTTTGACATGCCGGGTATGACGAAGGACGATGTGAAGGTGTGGGTGGAGGAGAAGATGTTGGTTGTGAAGGCTGAGAAGGCTGAGAAGGTGAAGAAGGCTAGTGAAGAAAATGGGAAGGTTGAAGAAGAAGAGGGAGATTGGTCTGCTAAAAGCTATGGGAGATACAGTAGCAGAATTGCTTTGCCTGAGAATGTTCAATTTGAGCAGATTAAGGCAGAGGTAAAAGATGGGGTTTTGTACATAACAATACCAAAGGCTATGGCTACAAGTAAAATTGTGGACATTAATGTCCAGTGA MAQAVSNLTRFVCFTPTKASNDPKKFVRKSSVKAVRGDGRENLDHLQRTIEKEKQTAQPPKKRVAPVAPIGLWDRFPTARTVQQMMETMERIMDDPFAYSGAWPSPPFTSDGAGYSRGRTPWEIKEGENEYKMRFDMPGMTKDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEEEEGDWSAKSYGRYSSRIALPENVQFEQIKAEVKDGVLYITIPKAMATSKIVDINVQ* Homology
BLAST of CsGy5G021250 vs. ExPASy Swiss-Prot
Match: P31170 (Heat shock protein 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP21 PE=1 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 3.5e-33 Identity = 82/212 (38.68%), Postives = 126/212 (59.43%), Query Frame = 0
BLAST of CsGy5G021250 vs. ExPASy Swiss-Prot
Match: P09886 (Small heat shock protein, chloroplastic OS=Pisum sativum OX=3888 GN=HSP21 PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.5e-31 Identity = 78/198 (39.39%), Postives = 119/198 (60.10%), Query Frame = 0
BLAST of CsGy5G021250 vs. ExPASy Swiss-Prot
Match: P09887 (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max OX=3847 GN=HSP22 PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 9.6e-31 Identity = 71/198 (35.86%), Postives = 121/198 (61.11%), Query Frame = 0
BLAST of CsGy5G021250 vs. ExPASy Swiss-Prot
Match: P30222 (Small heat shock protein, chloroplastic OS=Petunia hybrida OX=4102 GN=HSP22 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.5e-28 Identity = 81/230 (35.22%), Postives = 127/230 (55.22%), Query Frame = 0
BLAST of CsGy5G021250 vs. ExPASy Swiss-Prot
Match: Q95661 (Small heat shock protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=HSP21 PE=2 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.6e-28 Identity = 68/172 (39.53%), Postives = 108/172 (62.79%), Query Frame = 0
BLAST of CsGy5G021250 vs. NCBI nr
Match: XP_004135300.1 (small heat shock protein, chloroplastic [Cucumis sativus]) HSP 1 Score: 461 bits (1185), Expect = 1.81e-163 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
BLAST of CsGy5G021250 vs. NCBI nr
Match: XP_008446109.1 (PREDICTED: small heat shock protein, chloroplastic-like [Cucumis melo] >KAA0034232.1 small heat shock protein [Cucumis melo var. makuwa] >TYK15688.1 small heat shock protein [Cucumis melo var. makuwa]) HSP 1 Score: 426 bits (1095), Expect = 8.84e-150 Identity = 218/233 (93.56%), Postives = 224/233 (96.14%), Query Frame = 0
BLAST of CsGy5G021250 vs. NCBI nr
Match: XP_038893285.1 (small heat shock protein, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 404 bits (1039), Expect = 3.38e-141 Identity = 208/236 (88.14%), Postives = 218/236 (92.37%), Query Frame = 0
BLAST of CsGy5G021250 vs. NCBI nr
Match: XP_022956582.1 (small heat shock protein, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 400 bits (1027), Expect = 2.53e-139 Identity = 205/239 (85.77%), Postives = 216/239 (90.38%), Query Frame = 0
BLAST of CsGy5G021250 vs. NCBI nr
Match: KAG7032337.1 (25.3 kDa heat shock protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 399 bits (1026), Expect = 3.60e-139 Identity = 205/239 (85.77%), Postives = 216/239 (90.38%), Query Frame = 0
BLAST of CsGy5G021250 vs. ExPASy TrEMBL
Match: A0A0A0KTF5 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G591720 PE=3 SV=1) HSP 1 Score: 461 bits (1185), Expect = 8.76e-164 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
BLAST of CsGy5G021250 vs. ExPASy TrEMBL
Match: A0A5A7ST00 (Small heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001860 PE=3 SV=1) HSP 1 Score: 426 bits (1095), Expect = 4.28e-150 Identity = 218/233 (93.56%), Postives = 224/233 (96.14%), Query Frame = 0
BLAST of CsGy5G021250 vs. ExPASy TrEMBL
Match: A0A1S3BEA1 (small heat shock protein, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488933 PE=3 SV=1) HSP 1 Score: 426 bits (1095), Expect = 4.28e-150 Identity = 218/233 (93.56%), Postives = 224/233 (96.14%), Query Frame = 0
BLAST of CsGy5G021250 vs. ExPASy TrEMBL
Match: A0A6J1GWR4 (small heat shock protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458276 PE=3 SV=1) HSP 1 Score: 400 bits (1027), Expect = 1.23e-139 Identity = 205/239 (85.77%), Postives = 216/239 (90.38%), Query Frame = 0
BLAST of CsGy5G021250 vs. ExPASy TrEMBL
Match: A0A6J1KH52 (small heat shock protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493168 PE=3 SV=1) HSP 1 Score: 395 bits (1015), Expect = 7.97e-138 Identity = 203/238 (85.29%), Postives = 213/238 (89.50%), Query Frame = 0
BLAST of CsGy5G021250 vs. TAIR 10
Match: AT4G27670.1 (heat shock protein 21 ) HSP 1 Score: 143.3 bits (360), Expect = 2.5e-34 Identity = 82/212 (38.68%), Postives = 126/212 (59.43%), Query Frame = 0
BLAST of CsGy5G021250 vs. TAIR 10
Match: AT1G52560.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 87.0 bits (214), Expect = 2.1e-17 Identity = 56/153 (36.60%), Postives = 91/153 (59.48%), Query Frame = 0
BLAST of CsGy5G021250 vs. TAIR 10
Match: AT1G52560.2 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 87.0 bits (214), Expect = 2.1e-17 Identity = 56/153 (36.60%), Postives = 91/153 (59.48%), Query Frame = 0
BLAST of CsGy5G021250 vs. TAIR 10
Match: AT4G25200.1 (mitochondrion-localized small heat shock protein 23.6 ) HSP 1 Score: 85.9 bits (211), Expect = 4.7e-17 Identity = 50/149 (33.56%), Postives = 86/149 (57.72%), Query Frame = 0
BLAST of CsGy5G021250 vs. TAIR 10
Match: AT5G51440.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 77.8 bits (190), Expect = 1.3e-14 Identity = 49/147 (33.33%), Postives = 82/147 (55.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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