CsGy5G016683 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATCGTCGTCGCCACCACCGTGTACCGTGGTTCTTAGCCCTTGCGCCGCTTGTAAGATCCTCCGTCGGCGATGTGTCGATAAGTGTATTTTAGCACCATATTTTCCTCCGACTGACCCTTTCAAGTTCGCCGCCGTCCACAGAATATACGGAGCCGGCAACGTCATCAAGTTCTTGCAGGTAAACACCTACGTCTAAAATCAATTTAGAATACAATTTTATTTATTCATGTTTTTTCTCTCTTGAACTTAGAGGAATGTTGCAACGTCTTCGATATTTTCTATTTATCTTTTTTAAGTTAGTGTTAGAATCAACAATAAACAAACAAAGAAAGAAAAATATTGCAACACTACATGATACAAGTTGATGAAGAATTTTTTTTTTGGGCATCTCTCAACGACCCATATTTTAAATGTTAGTTCATAGTTTTTGTGATCAAGCAATAAATTCTCTATATTTTTCTTAAATTTTTCTAAAAATGTCTTTCTACTATGATGTAGTTAGAGTACTGTTATAATATATGAGTGCAACGTAAGATGTTATCAAGTATTACAATAATTAAAACACTGTCATAATTAATATACGAGAAAGAAAACATTTACAAACTTGGAAAAATCTACTATGTAACGTATTTTTGTAAAAGAAAATTTGATTTTTTTTCTCATGTTAAAAACAACATCGTCATTGCTCTACAAAATAAAAAAGAATAGCATACTAATTATGTAAAAAAGTAATACTACGAATAATTATATAGGAATTGCCAGAGAGTCAGAGAGCGGACGCTGCAAGTAGTTTGGTATACGAAGCGAATGCGAGAATTCGAGACCCAATCTATGGGTGCACCGGTTCAATATTTCAACTTCAAAATAAAGTGAGGGAGCTGCATGCACAATTAGCTGTGGCAAAGGCTGAGGTTCATAAGATGCAGCAACTTCAACATCCAAATTTGTTAGCCCTACCAAGAAGTCAATTTCAAGAACAACAAAACTATTGCATCTTCACCCAACTACAAAACTTTCCTTTTCCTGATTTTACCTCTCATCTTCCACATCTATAACAACAAATCTTCCCACATTGTTTCCGATATTCTTCATGCTCTTCCTAATCATCTTCTCTCTCTTTCCATATTCATATAAAACATCGATAAGTAAGTTTTATGTCGGTTGAGTCTACGCTCATGTTGTCAATAAAGTTTGAGTTTTTCTTTTGTTTGCTACTTTTTTTTTTTAATTGGGTTAAAAATACTATTTTGATCTTTTATTAATACAAATGGAAGGTATTGTATTTGAGTTTAAGACCTCTTAATACCCTCAAATGCATACAAATGTGTAAGTTGAATCAAGTTTTCATTAGCATCATTTTGATTTTTTTACTTTAGAGTGCTTGTTCAATTTTAATCTACCGAGCATTTAATTTTTTTCTCGTGTTATTTTCATGCATTCTTATTAATGATATACATACCCCTTGGACAATTATAACAATACAGATTTTTACATAACAAACCATTCTTTCACCATATATTTCATAAATATATTTGGTTAATTTTCATAAATCTAATAAAACACAACAAAATTTACAGTTCATGTAACAAAAAGCAAAAGTTTACTATATATAATAATTTGTATTCGTTTTAAGGGACTGATCGACATGGCAGCAATAAGCTCAGCTCAAAGCAACATGATTCTTACATGAAAAGTGAAAAAATATTTTGAAAGAATGAACTTAAAATGTCTAGTGAGTGATATTTTCAAAATATAATTTCCAAACATTTTATAATATTCTTCGACCATCCATAACATTTAAGAAGATTCACTAGAAAAATGGACCTTTCGTACGCTTGTAATTTTAGTTACTTACGTTTTTTGGAAGAAAAAAAGTCAAAAAAGTACGTGATTGCAAATATAAAACGTAAAAGAATTTTTATGAAAATGTGGAGGTGGGCCAATTTTTTACTTTCGTAACGTTTTTTATAAAGGTAAGTAATGTAGTTTTTTTTGTTGATATTTTAGAAAATGTGGAGAATTTTTATGAAAAGAAGGTGAAGTTACTTTTACTCAAATGAGAAGTAATATCTATTCAATTGGTTTCGGATTTGAGTATAGGAAAATATAAATGATATTTTAATATTAAAAATTTAGGTCTCCAAATTTTCTCCCTCCCTCGACAATCGCGTCTCGGTTCGCCGTCTAGCCATCTGATCGCTCGGCTTCCTCTAAATCGGCGTCTCCATTTCTCTTGGTTCCTCTCAATCACCGTCTCCATCTCTCTCGGCTTCCTCTCAATCTCCGCTGATTTCGTTTCCGACTCTCTCCCTGCCGCCGTCTCCGACTCTCTCCTTATTCTCTCACTCCAGTAATTTCTCCACCCACTAGAAGAGCTCTCTCTGTCTCTGCAATTTCTCCACCCACCTTCCAAATCCGCCGCATCGAATTTCTTCGACCTCCCGGACTCGGCCGGCGTCAAGGCGGTGGAGTTTCGAATTGGATTGGGTGAAACCCACCTTGACGGAGACCAGGTAATTTCATTTCAAAATCCAATTTAGGGGATGAAAGAATATAATAATGTGATTGTTTGACTATATGATTTGATTTGAACTGAGTGAAGTCCTAACTAAACATAGATTTTATGTATTATAGTAAGAATTAATTTGGTTTTTCTTGTTGTAATACAAACTAGAATGCACTCTGCATCCCTTCTTCTAGTTTGAAATGTGTTTTTGATTTGTTGGAAAAATAAGATGTCGTGAGCACCTTAGAAGAAGATGGATTTTGACCCAACTTTTTGAGAATTGGGAGCATACAAAGAAGAGCCCCCCCACCCCCCCTCAAATGGTGCCTTCCAACTTTTTATAGAATAATAATCAATACATAACATTCTACCGTATTTGTTTTACAATTTCATTGAGATTGAGATGGGATTGTTTTAAATTAATCTTACTGTATGCTTTTTTTTCCTTTCTTTGATTCCTTTTCAAATAAAAGTTATCCTTTGCAACAAACTACCACACAATCTCTAAGAAAACAAAATTACACAAACTGAAAAAATTGGATTATCAAAGTAGGAGATTACAGAGAATTCAATACATAGAGAGGGGAAAGTAACTTAAAAAGAAGAACTAGTTTAATGACATTGGAGCATGGCAATTAAATACTTTTTACTCGAGAGAAAAATTAGTGCAGTTGACAGCAGAATGTTCAAGTTGCAATTAGCCTAAAATAATAATAATAAAAGAATATTTGCCTACCCATATACAAAACTAAGCCCATCTCAAGTTACTATTGTTAAAGAATTTGAATAGTCGTCTTCTTTGTTTTGGCCTAGATCTAACCTTGGTTTTATTATGTTAGGAGTCTTTTGGTTATTTCAGAAGTGTTTTAGAACGCTTAGGTAACTAGAATTCTACTTCTTGGGTTTGTTTGCTTGTACGCTAGTATGATGCATCATGTATTTCTATTATGTATGATTATGACCTGTGTTCTTATGAAACTGTGATGCGTTCTGATATGGTTGGGCATGCCTTAATGTTTGTATAAATTTTAAATGTATAACCTGTTGGAATGCTAGTTTTTGCCAGTTTATACAAGCATGTTTTGAGAATGCTGGAACATACACATAATTTAATGTTGAGTGCATGTTACTGTTTATGTGGTTTTGGGCATAAAACATGTTAATAGAGTAGCATTGTTGGTCTTGGCTTAATTAGGATTGGTGCTATGAGTTTAGAATGGAAAGTAATAGAATTCTTGAGAACGTTGATGGGCCTTGGTGGAGTCAGTCAGGGCCCACGGAGAGGTCGTGGGCTTGGGTAATATCAGTTGGAGCTGATAGAGAGGTCAGTGGCCCTGGATATATCAGTTAGGAATGACAGAGATCGTTAATGACCCTGGATGAAGTCAATGGGGTCAATGGAGGGCGTTGATGACCCTCGATATATTTCATTGGGGCCTGCAGGAAATGTCAGTGGCCCTTGACACGATCAAATTGGCAACATGTCTTGAGGGATTTGTTGAGAAAGAATTGTAA ATGCAATCGTCGTCGCCACCACCGTGTACCGTGGTTCTTAGCCCTTGCGCCGCTTGTAAGATCCTCCGTCGGCGATGTGTCGATAAGTGTATTTTAGCACCATATTTTCCTCCGACTGACCCTTTCAAGTTCGCCGCCGTCCACAGAATATACGGAGCCGGCAACGTCATCAAGTTCTTGCAGGAATTGCCAGAGAGTCAGAGAGCGGACGCTGCAAGTAGTTTGGTATACGAAGCGAATGCGAGAATTCGAGACCCAATCTATGGGTGCACCGGTTCAATATTTCAACTTCAAAATAAAGTGAGGGAGCTGCATGCACAATTAGCTGTGGCAAAGGCTGAGGTTCATAAGATGCAGCAACTTCAACATCCAAATTTGTTAGCCCTACCAAGAAGTCTCCAAATTTTCTCCCTCCCTCGACAATCGCGTCTCGAAGAGCTCTCTCTGTCTCTGCAATTTCTCCACCCACCTTCCAAATCCGCCGCATCGAATTTCTTCGACCTCCCGGACTCGGCCGGCGTCAAGGCGGTGGAGTTTCGAATTGGATTGGGTGAAACCCACCTTGACGGAGACCAGGATTGGTGCTATGAGTTTAGAATGGAAAGTAATAGAATTCTTGAGAACGTTGATGGGCCTTGGTGGAGTCAGTCAGGGCCCACGGAGAGGTCGTGGGCTTGGGTAATATCAGTTGGAGCTGATAGAGAGGAAATGTCAGTGGCCCTTGACACGATCAAATTGGCAACATGTCTTGAGGGATTTGTTGAGAAAGAATTGTAA ATGCAATCGTCGTCGCCACCACCGTGTACCGTGGTTCTTAGCCCTTGCGCCGCTTGTAAGATCCTCCGTCGGCGATGTGTCGATAAGTGTATTTTAGCACCATATTTTCCTCCGACTGACCCTTTCAAGTTCGCCGCCGTCCACAGAATATACGGAGCCGGCAACGTCATCAAGTTCTTGCAGGAATTGCCAGAGAGTCAGAGAGCGGACGCTGCAAGTAGTTTGGTATACGAAGCGAATGCGAGAATTCGAGACCCAATCTATGGGTGCACCGGTTCAATATTTCAACTTCAAAATAAAGTGAGGGAGCTGCATGCACAATTAGCTGTGGCAAAGGCTGAGGTTCATAAGATGCAGCAACTTCAACATCCAAATTTGTTAGCCCTACCAAGAAGTCTCCAAATTTTCTCCCTCCCTCGACAATCGCGTCTCGAAGAGCTCTCTCTGTCTCTGCAATTTCTCCACCCACCTTCCAAATCCGCCGCATCGAATTTCTTCGACCTCCCGGACTCGGCCGGCGTCAAGGCGGTGGAGTTTCGAATTGGATTGGGTGAAACCCACCTTGACGGAGACCAGGATTGGTGCTATGAGTTTAGAATGGAAAGTAATAGAATTCTTGAGAACGTTGATGGGCCTTGGTGGAGTCAGTCAGGGCCCACGGAGAGGTCGTGGGCTTGGGTAATATCAGTTGGAGCTGATAGAGAGGAAATGTCAGTGGCCCTTGACACGATCAAATTGGCAACATGTCTTGAGGGATTTGTTGAGAAAGAATTGTAA MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPNLLALPRSLQIFSLPRQSRLEELSLSLQFLHPPSKSAASNFFDLPDSAGVKAVEFRIGLGETHLDGDQDWCYEFRMESNRILENVDGPWWSQSGPTERSWAWVISVGADREEMSVALDTIKLATCLEGFVEKEL* Homology
BLAST of CsGy5G016683 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.7e-44 Identity = 92/153 (60.13%), Postives = 115/153 (75.16%), Query Frame = 0
BLAST of CsGy5G016683 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2) HSP 1 Score: 172.9 bits (437), Expect = 4.6e-42 Identity = 86/138 (62.32%), Postives = 104/138 (75.36%), Query Frame = 0
BLAST of CsGy5G016683 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 154.8 bits (390), Expect = 1.3e-36 Identity = 73/122 (59.84%), Postives = 92/122 (75.41%), Query Frame = 0
BLAST of CsGy5G016683 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2) HSP 1 Score: 148.3 bits (373), Expect = 1.2e-34 Identity = 75/167 (44.91%), Postives = 105/167 (62.87%), Query Frame = 0
BLAST of CsGy5G016683 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 7.9e-34 Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 0
BLAST of CsGy5G016683 vs. NCBI nr
Match: KAE8648523.1 (hypothetical protein Csa_008698 [Cucumis sativus]) HSP 1 Score: 517 bits (1331), Expect = 7.13e-185 Identity = 256/258 (99.22%), Postives = 256/258 (99.22%), Query Frame = 0
BLAST of CsGy5G016683 vs. NCBI nr
Match: KAG7016272.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 220 bits (560), Expect = 9.84e-69 Identity = 112/130 (86.15%), Postives = 118/130 (90.77%), Query Frame = 0
BLAST of CsGy5G016683 vs. NCBI nr
Match: KAG6578743.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 220 bits (560), Expect = 9.84e-69 Identity = 112/130 (86.15%), Postives = 118/130 (90.77%), Query Frame = 0
BLAST of CsGy5G016683 vs. NCBI nr
Match: XP_022939142.1 (LOB domain-containing protein 1-like [Cucurbita moschata]) HSP 1 Score: 215 bits (548), Expect = 6.70e-67 Identity = 110/131 (83.97%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of CsGy5G016683 vs. NCBI nr
Match: XP_023551518.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214 bits (545), Expect = 1.42e-66 Identity = 107/119 (89.92%), Postives = 112/119 (94.12%), Query Frame = 0
BLAST of CsGy5G016683 vs. ExPASy TrEMBL
Match: A0A0A0KU20 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G496470 PE=3 SV=1) HSP 1 Score: 266 bits (680), Expect = 1.62e-87 Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0
BLAST of CsGy5G016683 vs. ExPASy TrEMBL
Match: A0A6J1FFZ7 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445138 PE=3 SV=1) HSP 1 Score: 215 bits (548), Expect = 3.24e-67 Identity = 110/131 (83.97%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of CsGy5G016683 vs. ExPASy TrEMBL
Match: A0A6J1JZZ3 (LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489400 PE=3 SV=1) HSP 1 Score: 203 bits (517), Expect = 1.20e-62 Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of CsGy5G016683 vs. ExPASy TrEMBL
Match: D7SKT4 (LOB domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g03350 PE=3 SV=1) HSP 1 Score: 194 bits (494), Expect = 1.08e-58 Identity = 103/166 (62.05%), Postives = 125/166 (75.30%), Query Frame = 0
BLAST of CsGy5G016683 vs. ExPASy TrEMBL
Match: A0A438KNS2 (LOB domain-containing protein 11 OS=Vitis vinifera OX=29760 GN=LBD11_6 PE=3 SV=1) HSP 1 Score: 194 bits (494), Expect = 1.08e-58 Identity = 103/166 (62.05%), Postives = 125/166 (75.30%), Query Frame = 0
BLAST of CsGy5G016683 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 ) HSP 1 Score: 181.0 bits (458), Expect = 1.2e-45 Identity = 92/153 (60.13%), Postives = 115/153 (75.16%), Query Frame = 0
BLAST of CsGy5G016683 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 ) HSP 1 Score: 172.9 bits (437), Expect = 3.3e-43 Identity = 86/138 (62.32%), Postives = 104/138 (75.36%), Query Frame = 0
BLAST of CsGy5G016683 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 154.8 bits (390), Expect = 9.2e-38 Identity = 73/122 (59.84%), Postives = 92/122 (75.41%), Query Frame = 0
BLAST of CsGy5G016683 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 ) HSP 1 Score: 148.3 bits (373), Expect = 8.6e-36 Identity = 75/167 (44.91%), Postives = 105/167 (62.87%), Query Frame = 0
BLAST of CsGy5G016683 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 ) HSP 1 Score: 145.6 bits (366), Expect = 5.6e-35 Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|