CsGy5G016683 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G016683
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	LOB domain-containing protein
Location	Gy14Chr5: 23029065 .. 23033090 (+)
RNA-Seq Expression	CsGy5G016683
Synteny	CsGy5G016683

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATCGTCGTCGCCACCACCGTGTACCGTGGTTCTTAGCCCTTGCGCCGCTTGTAAGATCCTCCGTCGGCGATGTGTCGATAAGTGTATTTTAGCACCATATTTTCCTCCGACTGACCCTTTCAAGTTCGCCGCCGTCCACAGAATATACGGAGCCGGCAACGTCATCAAGTTCTTGCAGGTAAACACCTACGTCTAAAATCAATTTAGAATACAATTTTATTTATTCATGTTTTTTCTCTCTTGAACTTAGAGGAATGTTGCAACGTCTTCGATATTTTCTATTTATCTTTTTTAAGTTAGTGTTAGAATCAACAATAAACAAACAAAGAAAGAAAAATATTGCAACACTACATGATACAAGTTGATGAAGAATTTTTTTTTTGGGCATCTCTCAACGACCCATATTTTAAATGTTAGTTCATAGTTTTTGTGATCAAGCAATAAATTCTCTATATTTTTCTTAAATTTTTCTAAAAATGTCTTTCTACTATGATGTAGTTAGAGTACTGTTATAATATATGAGTGCAACGTAAGATGTTATCAAGTATTACAATAATTAAAACACTGTCATAATTAATATACGAGAAAGAAAACATTTACAAACTTGGAAAAATCTACTATGTAACGTATTTTTGTAAAAGAAAATTTGATTTTTTTTCTCATGTTAAAAACAACATCGTCATTGCTCTACAAAATAAAAAAGAATAGCATACTAATTATGTAAAAAAGTAATACTACGAATAATTATATAGGAATTGCCAGAGAGTCAGAGAGCGGACGCTGCAAGTAGTTTGGTATACGAAGCGAATGCGAGAATTCGAGACCCAATCTATGGGTGCACCGGTTCAATATTTCAACTTCAAAATAAAGTGAGGGAGCTGCATGCACAATTAGCTGTGGCAAAGGCTGAGGTTCATAAGATGCAGCAACTTCAACATCCAAATTTGTTAGCCCTACCAAGAAGTCAATTTCAAGAACAACAAAACTATTGCATCTTCACCCAACTACAAAACTTTCCTTTTCCTGATTTTACCTCTCATCTTCCACATCTATAACAACAAATCTTCCCACATTGTTTCCGATATTCTTCATGCTCTTCCTAATCATCTTCTCTCTCTTTCCATATTCATATAAAACATCGATAAGTAAGTTTTATGTCGGTTGAGTCTACGCTCATGTTGTCAATAAAGTTTGAGTTTTTCTTTTGTTTGCTACTTTTTTTTTTTAATTGGGTTAAAAATACTATTTTGATCTTTTATTAATACAAATGGAAGGTATTGTATTTGAGTTTAAGACCTCTTAATACCCTCAAATGCATACAAATGTGTAAGTTGAATCAAGTTTTCATTAGCATCATTTTGATTTTTTTACTTTAGAGTGCTTGTTCAATTTTAATCTACCGAGCATTTAATTTTTTTCTCGTGTTATTTTCATGCATTCTTATTAATGATATACATACCCCTTGGACAATTATAACAATACAGATTTTTACATAACAAACCATTCTTTCACCATATATTTCATAAATATATTTGGTTAATTTTCATAAATCTAATAAAACACAACAAAATTTACAGTTCATGTAACAAAAAGCAAAAGTTTACTATATATAATAATTTGTATTCGTTTTAAGGGACTGATCGACATGGCAGCAATAAGCTCAGCTCAAAGCAACATGATTCTTACATGAAAAGTGAAAAAATATTTTGAAAGAATGAACTTAAAATGTCTAGTGAGTGATATTTTCAAAATATAATTTCCAAACATTTTATAATATTCTTCGACCATCCATAACATTTAAGAAGATTCACTAGAAAAATGGACCTTTCGTACGCTTGTAATTTTAGTTACTTACGTTTTTTGGAAGAAAAAAAGTCAAAAAAGTACGTGATTGCAAATATAAAACGTAAAAGAATTTTTATGAAAATGTGGAGGTGGGCCAATTTTTTACTTTCGTAACGTTTTTTATAAAGGTAAGTAATGTAGTTTTTTTTGTTGATATTTTAGAAAATGTGGAGAATTTTTATGAAAAGAAGGTGAAGTTACTTTTACTCAAATGAGAAGTAATATCTATTCAATTGGTTTCGGATTTGAGTATAGGAAAATATAAATGATATTTTAATATTAAAAATTTAGGTCTCCAAATTTTCTCCCTCCCTCGACAATCGCGTCTCGGTTCGCCGTCTAGCCATCTGATCGCTCGGCTTCCTCTAAATCGGCGTCTCCATTTCTCTTGGTTCCTCTCAATCACCGTCTCCATCTCTCTCGGCTTCCTCTCAATCTCCGCTGATTTCGTTTCCGACTCTCTCCCTGCCGCCGTCTCCGACTCTCTCCTTATTCTCTCACTCCAGTAATTTCTCCACCCACTAGAAGAGCTCTCTCTGTCTCTGCAATTTCTCCACCCACCTTCCAAATCCGCCGCATCGAATTTCTTCGACCTCCCGGACTCGGCCGGCGTCAAGGCGGTGGAGTTTCGAATTGGATTGGGTGAAACCCACCTTGACGGAGACCAGGTAATTTCATTTCAAAATCCAATTTAGGGGATGAAAGAATATAATAATGTGATTGTTTGACTATATGATTTGATTTGAACTGAGTGAAGTCCTAACTAAACATAGATTTTATGTATTATAGTAAGAATTAATTTGGTTTTTCTTGTTGTAATACAAACTAGAATGCACTCTGCATCCCTTCTTCTAGTTTGAAATGTGTTTTTGATTTGTTGGAAAAATAAGATGTCGTGAGCACCTTAGAAGAAGATGGATTTTGACCCAACTTTTTGAGAATTGGGAGCATACAAAGAAGAGCCCCCCCACCCCCCCTCAAATGGTGCCTTCCAACTTTTTATAGAATAATAATCAATACATAACATTCTACCGTATTTGTTTTACAATTTCATTGAGATTGAGATGGGATTGTTTTAAATTAATCTTACTGTATGCTTTTTTTTCCTTTCTTTGATTCCTTTTCAAATAAAAGTTATCCTTTGCAACAAACTACCACACAATCTCTAAGAAAACAAAATTACACAAACTGAAAAAATTGGATTATCAAAGTAGGAGATTACAGAGAATTCAATACATAGAGAGGGGAAAGTAACTTAAAAAGAAGAACTAGTTTAATGACATTGGAGCATGGCAATTAAATACTTTTTACTCGAGAGAAAAATTAGTGCAGTTGACAGCAGAATGTTCAAGTTGCAATTAGCCTAAAATAATAATAATAAAAGAATATTTGCCTACCCATATACAAAACTAAGCCCATCTCAAGTTACTATTGTTAAAGAATTTGAATAGTCGTCTTCTTTGTTTTGGCCTAGATCTAACCTTGGTTTTATTATGTTAGGAGTCTTTTGGTTATTTCAGAAGTGTTTTAGAACGCTTAGGTAACTAGAATTCTACTTCTTGGGTTTGTTTGCTTGTACGCTAGTATGATGCATCATGTATTTCTATTATGTATGATTATGACCTGTGTTCTTATGAAACTGTGATGCGTTCTGATATGGTTGGGCATGCCTTAATGTTTGTATAAATTTTAAATGTATAACCTGTTGGAATGCTAGTTTTTGCCAGTTTATACAAGCATGTTTTGAGAATGCTGGAACATACACATAATTTAATGTTGAGTGCATGTTACTGTTTATGTGGTTTTGGGCATAAAACATGTTAATAGAGTAGCATTGTTGGTCTTGGCTTAATTAGGATTGGTGCTATGAGTTTAGAATGGAAAGTAATAGAATTCTTGAGAACGTTGATGGGCCTTGGTGGAGTCAGTCAGGGCCCACGGAGAGGTCGTGGGCTTGGGTAATATCAGTTGGAGCTGATAGAGAGGTCAGTGGCCCTGGATATATCAGTTAGGAATGACAGAGATCGTTAATGACCCTGGATGAAGTCAATGGGGTCAATGGAGGGCGTTGATGACCCTCGATATATTTCATTGGGGCCTGCAGGAAATGTCAGTGGCCCTTGACACGATCAAATTGGCAACATGTCTTGAGGGATTTGTTGAGAAAGAATTGTAA

mRNA sequence

ATGCAATCGTCGTCGCCACCACCGTGTACCGTGGTTCTTAGCCCTTGCGCCGCTTGTAAGATCCTCCGTCGGCGATGTGTCGATAAGTGTATTTTAGCACCATATTTTCCTCCGACTGACCCTTTCAAGTTCGCCGCCGTCCACAGAATATACGGAGCCGGCAACGTCATCAAGTTCTTGCAGGAATTGCCAGAGAGTCAGAGAGCGGACGCTGCAAGTAGTTTGGTATACGAAGCGAATGCGAGAATTCGAGACCCAATCTATGGGTGCACCGGTTCAATATTTCAACTTCAAAATAAAGTGAGGGAGCTGCATGCACAATTAGCTGTGGCAAAGGCTGAGGTTCATAAGATGCAGCAACTTCAACATCCAAATTTGTTAGCCCTACCAAGAAGTCTCCAAATTTTCTCCCTCCCTCGACAATCGCGTCTCGAAGAGCTCTCTCTGTCTCTGCAATTTCTCCACCCACCTTCCAAATCCGCCGCATCGAATTTCTTCGACCTCCCGGACTCGGCCGGCGTCAAGGCGGTGGAGTTTCGAATTGGATTGGGTGAAACCCACCTTGACGGAGACCAGGATTGGTGCTATGAGTTTAGAATGGAAAGTAATAGAATTCTTGAGAACGTTGATGGGCCTTGGTGGAGTCAGTCAGGGCCCACGGAGAGGTCGTGGGCTTGGGTAATATCAGTTGGAGCTGATAGAGAGGAAATGTCAGTGGCCCTTGACACGATCAAATTGGCAACATGTCTTGAGGGATTTGTTGAGAAAGAATTGTAA

Coding sequence (CDS)

ATGCAATCGTCGTCGCCACCACCGTGTACCGTGGTTCTTAGCCCTTGCGCCGCTTGTAAGATCCTCCGTCGGCGATGTGTCGATAAGTGTATTTTAGCACCATATTTTCCTCCGACTGACCCTTTCAAGTTCGCCGCCGTCCACAGAATATACGGAGCCGGCAACGTCATCAAGTTCTTGCAGGAATTGCCAGAGAGTCAGAGAGCGGACGCTGCAAGTAGTTTGGTATACGAAGCGAATGCGAGAATTCGAGACCCAATCTATGGGTGCACCGGTTCAATATTTCAACTTCAAAATAAAGTGAGGGAGCTGCATGCACAATTAGCTGTGGCAAAGGCTGAGGTTCATAAGATGCAGCAACTTCAACATCCAAATTTGTTAGCCCTACCAAGAAGTCTCCAAATTTTCTCCCTCCCTCGACAATCGCGTCTCGAAGAGCTCTCTCTGTCTCTGCAATTTCTCCACCCACCTTCCAAATCCGCCGCATCGAATTTCTTCGACCTCCCGGACTCGGCCGGCGTCAAGGCGGTGGAGTTTCGAATTGGATTGGGTGAAACCCACCTTGACGGAGACCAGGATTGGTGCTATGAGTTTAGAATGGAAAGTAATAGAATTCTTGAGAACGTTGATGGGCCTTGGTGGAGTCAGTCAGGGCCCACGGAGAGGTCGTGGGCTTGGGTAATATCAGTTGGAGCTGATAGAGAGGAAATGTCAGTGGCCCTTGACACGATCAAATTGGCAACATGTCTTGAGGGATTTGTTGAGAAAGAATTGTAA

Protein sequence

MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPNLLALPRSLQIFSLPRQSRLEELSLSLQFLHPPSKSAASNFFDLPDSAGVKAVEFRIGLGETHLDGDQDWCYEFRMESNRILENVDGPWWSQSGPTERSWAWVISVGADREEMSVALDTIKLATCLEGFVEKEL*

Homology

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BLAST of CsGy5G016683 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.7e-44
Identity = 92/153 (60.13%), Postives = 115/153 (75.16%), Query Frame = 0


Query: 3   SSSPPPC---TVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKF 62
           SSSPPP     VVLSPCAACKILRRRC ++C+LAPYFPPTDP KF   HR++GA N+IKF
Sbjct: 18  SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKF 77

Query: 63  LQELPESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQ 122
           LQELPESQR DA +S+VYEA ARIRDP+YGC G+I+ LQ +V EL AQLA A+ E+  M 
Sbjct: 78  LQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNM- 137

Query: 123 QLQHPNLLALPRSLQIFSLPRQSRLEELSLSLQ 153
           Q Q  NLL L     I+++ +Q + E+ ++S +
Sbjct: 138 QFQRSNLLEL-----IYNMDQQQKQEQDNMSFE 164

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BLAST of CsGy5G016683 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 4.6e-42
Identity = 86/138 (62.32%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 6   PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPE 65
           PP   VVLSPCAACKILRRRC DKC+LAPYFPPTDP KF   HR++GA N+IKFLQELPE
Sbjct: 46  PPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPE 105

Query: 66  SQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPN 125
           SQR DA +S+VYEA AR+RDP+YGC G+I+ LQ +V EL AQLA  + E+  M QLQ  +
Sbjct: 106 SQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGM-QLQRSS 165

Query: 126 LLALPRSLQIFSLPRQSR 144
           LL L  +++   L  Q +
Sbjct: 166 LLELIYNMEQTKLSVQEQ 182

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BLAST of CsGy5G016683 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-36
Identity = 73/122 (59.84%), Postives = 92/122 (75.41%), Query Frame = 0


Query: 14  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPESQRADAAS 73
           SPCA+CK+LRRRC   CI APYFPP DP KFA VH+++GA NV K LQELP  QRADA +
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 74  SLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPNLLALPRSL 133
           SLV+EANAR+RDP+YGC G+I  LQN+V +L  QLAVA+AE+  +Q    P L +  + L
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQVL 126

Query: 134 QI 136
           ++
Sbjct: 127 EL 128

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BLAST of CsGy5G016683 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 1.2e-34
Identity = 75/167 (44.91%), Postives = 105/167 (62.87%), Query Frame = 0


Query: 4   SSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQEL 63
           S PP     ++PCAACK+LRRRC  +C  +PYF P +P KFA+VH+++GA NV K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 64  PESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQH 123
           PESQRADAA+SLVYEAN R+RDP+YGC G+I  LQ +V+ L A+L   ++E+ K +Q + 
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

Query: 124 PNLLALPRSLQIFSLPRQSRLEELSLSLQ---------FLHPPSKSA 162
              L +P + Q+        +  ++   Q           HPPS S+
Sbjct: 154 VATLIVPSNSQVAGFHNSGGVSVIAPPPQRPTTPPQPTTAHPPSPSS 200

[Close]

BLAST of CsGy5G016683 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.9e-34
Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 14  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPESQRADAAS 73
           SPCAACK+LRRRC   C+ +PYFP  +P KFA VHR++GA NV K LQELP  QR DA S
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 74  SLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPN 126
           S+VYEANAR+RDP+YGC G+I  LQ ++  L AQLA+A+AEV  ++  Q  N
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTN 123

[Close]

BLAST of CsGy5G016683 vs. NCBI nr
Match: KAE8648523.1 (hypothetical protein Csa_008698 [Cucumis sativus])

HSP 1 Score: 517 bits (1331), Expect = 7.13e-185
Identity = 256/258 (99.22%), Postives = 256/258 (99.22%), Query Frame = 0


Query: 1   MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFL 60
           MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFL
Sbjct: 1   MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFL 60

Query: 61  QELPESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ 120
           QELPE QRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ
Sbjct: 61  QELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ 120

Query: 121 LQHPNLLALPRSLQIFSLPRQSRLEELSLSLQFLHPPSKSAASNFFDLPDSAGVKAVEFR 180
           LQHPNLLALPRSLQIFSLPRQSRLE LSLSLQFLHPPSKSAASNFFDLPDSAGVKAVEFR
Sbjct: 121 LQHPNLLALPRSLQIFSLPRQSRLE-LSLSLQFLHPPSKSAASNFFDLPDSAGVKAVEFR 180

Query: 181 IGLGETHLDGDQDWCYEFRMESNRILENVDGPWWSQSGPTERSWAWVISVGADREEMSVA 240
           IGLGETHLDGDQDWCYEFRMESNRILENVDGPWWSQSGPTERSWAWVISVGADREEMSVA
Sbjct: 181 IGLGETHLDGDQDWCYEFRMESNRILENVDGPWWSQSGPTERSWAWVISVGADREEMSVA 240

Query: 241 LDTIKLATCLEGFVEKEL 258
           LDTIKLATCLEGFVEKEL
Sbjct: 241 LDTIKLATCLEGFVEKEL 257

[Close]

BLAST of CsGy5G016683 vs. NCBI nr
Match: KAG7016272.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220 bits (560), Expect = 9.84e-69
Identity = 112/130 (86.15%), Postives = 118/130 (90.77%), Query Frame = 0


Query: 1   MQSSSPPP-CTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKF 60
           MQS  PPP   VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKF
Sbjct: 1   MQSPPPPPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKF 60

Query: 61  LQELPESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQ 120
           LQELPE+QRADA SSLVYEANARIRDP+YGCTGSIFQLQN+V EL AQLAVAKAEVHKMQ
Sbjct: 61  LQELPENQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQAQLAVAKAEVHKMQ 120

Query: 121 QLQHPNLLAL 129
             QH NLLAL
Sbjct: 121 A-QHANLLAL 129

[Close]

BLAST of CsGy5G016683 vs. NCBI nr
Match: KAG6578743.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 220 bits (560), Expect = 9.84e-69
Identity = 112/130 (86.15%), Postives = 118/130 (90.77%), Query Frame = 0


Query: 1   MQSSSPPP-CTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKF 60
           MQS  PPP   VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKF
Sbjct: 1   MQSPPPPPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKF 60

Query: 61  LQELPESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQ 120
           LQELPE+QRADA SSLVYEANARIRDP+YGCTGSIFQLQN+V EL AQLAVAKAEVHKMQ
Sbjct: 61  LQELPENQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQAQLAVAKAEVHKMQ 120

Query: 121 QLQHPNLLAL 129
             QH NLLAL
Sbjct: 121 A-QHANLLAL 129

[Close]

BLAST of CsGy5G016683 vs. NCBI nr
Match: XP_022939142.1 (LOB domain-containing protein 1-like [Cucurbita moschata])

HSP 1 Score: 215 bits (548), Expect = 6.70e-67
Identity = 110/131 (83.97%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MQSSSPPP--CTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIK 60
           MQS  PPP    VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIK
Sbjct: 1   MQSPPPPPPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIK 60

Query: 61  FLQELPESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKM 120
           FLQELPE+QRADA SSLVYEANARIRDP+YGCTGSIFQLQN+V EL  QLAVAKAEVHKM
Sbjct: 61  FLQELPENQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQVQLAVAKAEVHKM 120

Query: 121 QQLQHPNLLAL 129
              QH NLLAL
Sbjct: 121 LA-QHANLLAL 130

[Close]

BLAST of CsGy5G016683 vs. NCBI nr
Match: XP_023551518.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214 bits (545), Expect = 1.42e-66
Identity = 107/119 (89.92%), Postives = 112/119 (94.12%), Query Frame = 0


Query: 11  VVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPESQRAD 70
           VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQELPE+QRAD
Sbjct: 2   VVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELPENQRAD 61

Query: 71  AASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPNLLAL 129
           A SSLVYEANARIRDPIYGCTGSIFQLQN+V EL AQLAVAKAEVHKMQ  QH NLLAL
Sbjct: 62  ATSSLVYEANARIRDPIYGCTGSIFQLQNQVSELQAQLAVAKAEVHKMQA-QHANLLAL 119

[Close]

BLAST of CsGy5G016683 vs. ExPASy TrEMBL
Match: A0A0A0KU20 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G496470 PE=3 SV=1)

HSP 1 Score: 266 bits (680), Expect = 1.62e-87
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFL 60
           MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFL
Sbjct: 1   MQSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFL 60

Query: 61  QELPESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ 120
           QELPE QRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ
Sbjct: 61  QELPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQ 120

Query: 121 LQHPNLLALPRS 132
           LQHPNLLALPRS
Sbjct: 121 LQHPNLLALPRS 132

[Close]

BLAST of CsGy5G016683 vs. ExPASy TrEMBL
Match: A0A6J1FFZ7 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445138 PE=3 SV=1)

HSP 1 Score: 215 bits (548), Expect = 3.24e-67
Identity = 110/131 (83.97%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MQSSSPPP--CTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIK 60
           MQS  PPP    VVLSPCAACKILRRRCVDKC+LAPYFPPT+P KFAAVHRI+GAGNVIK
Sbjct: 1   MQSPPPPPPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIK 60

Query: 61  FLQELPESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKM 120
           FLQELPE+QRADA SSLVYEANARIRDP+YGCTGSIFQLQN+V EL  QLAVAKAEVHKM
Sbjct: 61  FLQELPENQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQVQLAVAKAEVHKM 120

Query: 121 QQLQHPNLLAL 129
              QH NLLAL
Sbjct: 121 LA-QHANLLAL 130

[Close]

BLAST of CsGy5G016683 vs. ExPASy TrEMBL
Match: A0A6J1JZZ3 (LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489400 PE=3 SV=1)

HSP 1 Score: 203 bits (517), Expect = 1.20e-62
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 11  VVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPESQRAD 70
           VVLSPCAACKILRRRCVD+C+LAPYFPPT+P KFAAVHRI+GA NVIKFLQELP +QRAD
Sbjct: 2   VVLSPCAACKILRRRCVDECVLAPYFPPTEPLKFAAVHRIFGASNVIKFLQELPGNQRAD 61

Query: 71  AASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPNLLAL 129
           A SSLVYEANARIRDP+YGCTGSIFQLQN+V EL AQLA+AKAEVHKMQ  Q+ NLLAL
Sbjct: 62  ATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQAQLALAKAEVHKMQA-QNANLLAL 119

[Close]

BLAST of CsGy5G016683 vs. ExPASy TrEMBL
Match: D7SKT4 (LOB domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g03350 PE=3 SV=1)

HSP 1 Score: 194 bits (494), Expect = 1.08e-58
Identity = 103/166 (62.05%), Postives = 125/166 (75.30%), Query Frame = 0


Query: 2   QSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQ 61
            SS+PPP TVVLSPCAACKILRRRC +KC+LAPYFPPTDP KF   HR++GA N+IKFLQ
Sbjct: 27  SSSTPPPPTVVLSPCAACKILRRRCAEKCVLAPYFPPTDPAKFTTAHRVFGASNIIKFLQ 86

Query: 62  ELPESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQL 121
           ELPE QRADA SS+VYEA ARIRDP+YGCTG+I QLQ +V EL AQLA A+AE+  MQ  
Sbjct: 87  ELPEYQRADAVSSMVYEAQARIRDPVYGCTGAICQLQKQVSELQAQLAKAQAELVNMQ-C 146

Query: 122 QHPNLLALPRSLQIFSLPRQSRLEELSLSLQFLHPPSKSAASNFFD 167
           Q  NL+A+   +++   P+ S  ++ SL   F+ PPS  + S F D
Sbjct: 147 QQANLIAII-CMEMSGSPQPSSFQQ-SLD-SFISPPSYQSGSCFLD 188

[Close]

BLAST of CsGy5G016683 vs. ExPASy TrEMBL
Match: A0A438KNS2 (LOB domain-containing protein 11 OS=Vitis vinifera OX=29760 GN=LBD11_6 PE=3 SV=1)

HSP 1 Score: 194 bits (494), Expect = 1.08e-58
Identity = 103/166 (62.05%), Postives = 125/166 (75.30%), Query Frame = 0


Query: 2   QSSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQ 61
            SS+PPP TVVLSPCAACKILRRRC +KC+LAPYFPPTDP KF   HR++GA N+IKFLQ
Sbjct: 27  SSSTPPPPTVVLSPCAACKILRRRCAEKCVLAPYFPPTDPAKFTTAHRVFGASNIIKFLQ 86

Query: 62  ELPESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQL 121
           ELPE QRADA SS+VYEA ARIRDP+YGCTG+I QLQ +V EL AQLA A+AE+  MQ  
Sbjct: 87  ELPEYQRADAVSSMVYEAQARIRDPVYGCTGAICQLQKQVSELQAQLAKAQAELVNMQ-C 146

Query: 122 QHPNLLALPRSLQIFSLPRQSRLEELSLSLQFLHPPSKSAASNFFD 167
           Q  NL+A+   +++   P+ S  ++ SL   F+ PPS  + S F D
Sbjct: 147 QQANLIAII-CMEMSGSPQPSSFQQ-SLD-SFISPPSYQSGSCFLD 188

[Close]

BLAST of CsGy5G016683 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-45
Identity = 92/153 (60.13%), Postives = 115/153 (75.16%), Query Frame = 0


Query: 3   SSSPPPC---TVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKF 62
           SSSPPP     VVLSPCAACKILRRRC ++C+LAPYFPPTDP KF   HR++GA N+IKF
Sbjct: 18  SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKF 77

Query: 63  LQELPESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQ 122
           LQELPESQR DA +S+VYEA ARIRDP+YGC G+I+ LQ +V EL AQLA A+ E+  M 
Sbjct: 78  LQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNM- 137

Query: 123 QLQHPNLLALPRSLQIFSLPRQSRLEELSLSLQ 153
           Q Q  NLL L     I+++ +Q + E+ ++S +
Sbjct: 138 QFQRSNLLEL-----IYNMDQQQKQEQDNMSFE 164

[Close]

BLAST of CsGy5G016683 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 172.9 bits (437), Expect = 3.3e-43
Identity = 86/138 (62.32%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 6   PPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPE 65
           PP   VVLSPCAACKILRRRC DKC+LAPYFPPTDP KF   HR++GA N+IKFLQELPE
Sbjct: 46  PPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPE 105

Query: 66  SQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPN 125
           SQR DA +S+VYEA AR+RDP+YGC G+I+ LQ +V EL AQLA  + E+  M QLQ  +
Sbjct: 106 SQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGM-QLQRSS 165

Query: 126 LLALPRSLQIFSLPRQSR 144
           LL L  +++   L  Q +
Sbjct: 166 LLELIYNMEQTKLSVQEQ 182

[Close]

BLAST of CsGy5G016683 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 154.8 bits (390), Expect = 9.2e-38
Identity = 73/122 (59.84%), Postives = 92/122 (75.41%), Query Frame = 0


Query: 14  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPESQRADAAS 73
           SPCA+CK+LRRRC   CI APYFPP DP KFA VH+++GA NV K LQELP  QRADA +
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 74  SLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPNLLALPRSL 133
           SLV+EANAR+RDP+YGC G+I  LQN+V +L  QLAVA+AE+  +Q    P L +  + L
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQVL 126

Query: 134 QI 136
           ++
Sbjct: 127 EL 128

[Close]

BLAST of CsGy5G016683 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 148.3 bits (373), Expect = 8.6e-36
Identity = 75/167 (44.91%), Postives = 105/167 (62.87%), Query Frame = 0


Query: 4   SSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQEL 63
           S PP     ++PCAACK+LRRRC  +C  +PYF P +P KFA+VH+++GA NV K L E+
Sbjct: 34  SGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEV 93

Query: 64  PESQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQH 123
           PESQRADAA+SLVYEAN R+RDP+YGC G+I  LQ +V+ L A+L   ++E+ K +Q + 
Sbjct: 94  PESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

Query: 124 PNLLALPRSLQIFSLPRQSRLEELSLSLQ---------FLHPPSKSA 162
              L +P + Q+        +  ++   Q           HPPS S+
Sbjct: 154 VATLIVPSNSQVAGFHNSGGVSVIAPPPQRPTTPPQPTTAHPPSPSS 200

[Close]

BLAST of CsGy5G016683 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 145.6 bits (366), Expect = 5.6e-35
Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 14  SPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQELPESQRADAAS 73
           SPCAACK+LRRRC   C+ +PYFP  +P KFA VHR++GA NV K LQELP  QR DA S
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 74  SLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQHPN 126
           S+VYEANAR+RDP+YGC G+I  LQ ++  L AQLA+A+AEV  ++  Q  N
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTN 123

The following BLAST results are available for this feature:

BLAST of CsGy5G016683 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQR0	1.7e-44	60.13	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	4.6e-42	62.32	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q8LBW3	1.3e-36	59.84	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q8L5T5	1.2e-34	44.91	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]
Q9SHE9	7.9e-34	60.71	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]

BLAST of CsGy5G016683 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648523.1	7.13e-185	99.22	hypothetical protein Csa_008698 [Cucumis sativus]	[more]
KAG7016272.1	9.84e-69	86.15	LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
KAG6578743.1	9.84e-69	86.15	LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022939142.1	6.70e-67	83.97	LOB domain-containing protein 1-like [Cucurbita moschata]	[more]
XP_023551518.1	1.42e-66	89.92	LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G016683 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU20	1.62e-87	99.24	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G496470 PE=3 SV...	[more]
A0A6J1FFZ7	3.24e-67	83.97	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1JZZ3	1.20e-62	84.87	LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489400...	[more]
D7SKT4	1.08e-58	62.05	LOB domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g03350 PE...	[more]
A0A438KNS2	1.08e-58	62.05	LOB domain-containing protein 11 OS=Vitis vinifera OX=29760 GN=LBD11_6 PE=3 SV=1	[more]

BLAST of CsGy5G016683 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07900.1	1.2e-45	60.13	LOB domain-containing protein 1	[more]
AT2G28500.1	3.3e-43	62.32	LOB domain-containing protein 11	[more]
AT2G30130.1	9.2e-38	59.84	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G40470.1	8.6e-36	44.91	LOB domain-containing protein 15	[more]
AT1G31320.1	5.6e-35	60.71	LOB domain-containing protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..121
None	No IPR available	PANTHER	PTHR31301:SF137	LOB DOMAIN-CONTAINING PROTEIN 1	coord: 8..167
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 8..167
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 15..112 e-value: 2.3E-39 score: 133.9
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 14..115 score: 25.784306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G016683.1	CsGy5G016683.1	mRNA