CsGy5G013620 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G013620
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	universal stress protein A-like protein
Location	Gy14Chr5: 17812095 .. 17813001 (-)
RNA-Seq Expression	CsGy5G013620
Synteny	CsGy5G013620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATAGTAAAAATGGTATAGTTGGAGTTGCCATGGATTATTCTTCAACAAGCAAATCAGCTTTGAAATGAGCTGCTAATAACCTTCTTAAGGATGGAGATCACTTAATTTTGATACATGTTCAGCCTCCTAATTCTGATACTCCCACAAAGCTCCTTTTTCAAGACAATAGCTCACGTATACACCTTTTTTCTTTTCTTTTCTTTTTTTTTCACTCAAATTTCCTTTATTTACATGCTTGTTTTTATAATGACTCATTTGGTTTTGTTTTTTTGTAGCTTTGATTCCTCTTGAACAATTTAGAGAGATTAAATTGGAGAAGCAGTATGGATTGAGTAATGATGCTGAGGTTCTTGATATTCTTCACAATTTGGCTACAACTAAAGGGGTTTGTTTCTCTTTCTCTCTGTTTTTTTATTAATTTTATTTTAGTTATTTTGTTGATGAATAAATATTGAGAGATTTGGGTTATATGGTTACAGGTAAAAGTGATGGCTAAGGTTTATTGGGTGATCCAAGAGAGAAGTTGTGCGAAGCTGTTGATGATCTTAATCTTCACTCACTTGTTCTTGGAAGCAGAGGTTTAGGCTCTATTAAAAAGTAATCATCCTTTTCTTCTTTTTCTATCCAATAAAAAAAAAAAAAAAAAGAAGGTATAATTGCCATGTGATTTGATCATATAGAACTTGCAACCAAGTGTTTAATGCAACTCTACGAAACTGTTCTCTTCATTAATGGCAGGGTATTGCTTGGGAGTGTGAGCAACCATGTGGTGAAAAATGCTTCATGTCCAGTAACAGTGGTGAAAGAGAAGCCATTGGCACTGTCAAGCTCCAAATCTTAATTGTTAAATCCTCCATTTGCCCTTTTCTTCTTCATTTGTTCATAATTTACTATACATAG

mRNA sequence

ATGGAGAATAGTAAAAATGGTATAGATGGAGATCACTTAATTTTGATACATGTTCAGCCTCCTAATTCTGATACTCCCACAAAGCTCCTTTTTCAAGACAATAGCTCACCTTTGATTCCTCTTGAACAATTTAGAGAGATTAAATTGGAGAAGCAGTATGGATTGAGTAATGATGCTGAGGTTCTTGATATTCTTCACAATTTGGCTACAACTAAAGGGGTAAAAGTGATGGCTAAGGTTTATTGGGTGATCCAAGAGAGAAGTTGTGCGAAGCTGTTGATGATCTTAATCTTCACTCACTTGTTCTTGGAAGCAGAGGGTATTGCTTGGGAGTGTGAGCAACCATGTGGTGAAAAATGCTTCATGTCCAGTAACAGTGGTGAAAGAGAAGCCATTGGCACTGTCAAGCTCCAAATCTTAATTGTTAAATCCTCCATTTGCCCTTTTCTTCTTCATTTGTTCATAATTTACTATACATAG

Coding sequence (CDS)

ATGGAGAATAGTAAAAATGGTATAGATGGAGATCACTTAATTTTGATACATGTTCAGCCTCCTAATTCTGATACTCCCACAAAGCTCCTTTTTCAAGACAATAGCTCACCTTTGATTCCTCTTGAACAATTTAGAGAGATTAAATTGGAGAAGCAGTATGGATTGAGTAATGATGCTGAGGTTCTTGATATTCTTCACAATTTGGCTACAACTAAAGGGGTAAAAGTGATGGCTAAGGTTTATTGGGTGATCCAAGAGAGAAGTTGTGCGAAGCTGTTGATGATCTTAATCTTCACTCACTTGTTCTTGGAAGCAGAGGGTATTGCTTGGGAGTGTGAGCAACCATGTGGTGAAAAATGCTTCATGTCCAGTAACAGTGGTGAAAGAGAAGCCATTGGCACTGTCAAGCTCCAAATCTTAATTGTTAAATCCTCCATTTGCCCTTTTCTTCTTCATTTGTTCATAATTTACTATACATAG

Protein sequence

MENSKNGIDGDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQYGLSNDAEVLDILHNLATTKGVKVMAKVYWVIQERSCAKLLMILIFTHLFLEAEGIAWECEQPCGEKCFMSSNSGEREAIGTVKLQILIVKSSICPFLLHLFIIYYT*

Homology

[Close]

BLAST of CsGy5G013620 vs. NCBI nr
Match: XP_011655150.1 (LOW QUALITY PROTEIN: universal stress protein PHOS32 [Cucumis sativus])

HSP 1 Score: 152 bits (383), Expect = 1.48e-43
Identity = 81/106 (76.42%), Postives = 81/106 (76.42%), Query Frame = 0


Query: 1   MENSKNGI------------------------DGDHLILIHVQPPNSDTPTKLLFQDNSS 60
           MENSKNGI                        DGDHLILIHVQPPNSDTPTKLLFQD SS
Sbjct: 1   MENSKNGIVGVAMDYSSTSKSALKXAANNLLKDGDHLILIHVQPPNSDTPTKLLFQDTSS 60

Query: 61  PLIPLEQFREIKLEKQYGLSNDAEVLDILHNLATTKGVKVMAKVYW 82
           PLIPLEQFREIKLEKQYGLSNDAEVLDILHNLATTKGVKVMAKVYW
Sbjct: 61  PLIPLEQFREIKLEKQYGLSNDAEVLDILHNLATTKGVKVMAKVYW 106

[Close]

BLAST of CsGy5G013620 vs. NCBI nr
Match: KAA0046278.1 (universal stress protein A-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (364), Expect = 7.80e-41
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 9  DGDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQYGLSNDAEVLDILHNL 68
          DGDHL+LIHVQPPNSDTPTKLLFQD  SPLIPLE+F EIKLEKQYGLSNDAEVLDILHNL
Sbjct: 21 DGDHLVLIHVQPPNSDTPTKLLFQDTGSPLIPLEEFGEIKLEKQYGLSNDAEVLDILHNL 80

Query: 69 ATTKGVKVMAKVYW 82
          ATTKGVKVMAKVYW
Sbjct: 81 ATTKGVKVMAKVYW 94

[Close]

BLAST of CsGy5G013620 vs. NCBI nr
Match: XP_008463151.1 (PREDICTED: universal stress protein A-like protein [Cucumis melo])

HSP 1 Score: 144 bits (364), Expect = 1.12e-40
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 9   DGDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQYGLSNDAEVLDILHNL 68
           DGDHL+LIHVQPPNSDTPTKLLFQD  SPLIPLE+F EIKLEKQYGLSNDAEVLDILHNL
Sbjct: 33  DGDHLVLIHVQPPNSDTPTKLLFQDTGSPLIPLEEFGEIKLEKQYGLSNDAEVLDILHNL 92

Query: 69  ATTKGVKVMAKVYW 82
           ATTKGVKVMAKVYW
Sbjct: 93  ATTKGVKVMAKVYW 106

[Close]

BLAST of CsGy5G013620 vs. NCBI nr
Match: XP_038875204.1 (universal stress protein PHOS32 [Benincasa hispida])

HSP 1 Score: 135 bits (339), Expect = 6.79e-37
Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 0


Query: 10  GDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQYGLSNDAEVLDILHNLA 69
           GDHLILIHV+PPNSDTPTKLLFQD  SPLIPLE+FREIKLEKQYGLSNDAEVLDIL  LA
Sbjct: 34  GDHLILIHVEPPNSDTPTKLLFQDTGSPLIPLEEFREIKLEKQYGLSNDAEVLDILDKLA 93

Query: 70  TTKGVKVMAKVYW 82
           T KGVKV+AKVYW
Sbjct: 94  TNKGVKVVAKVYW 106

[Close]

BLAST of CsGy5G013620 vs. NCBI nr
Match: XP_022938828.1 (universal stress protein A-like protein [Cucurbita moschata])

HSP 1 Score: 127 bits (319), Expect = 8.02e-34
Identity = 73/139 (52.52%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 10  GDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQYGLSNDAEVLDILHNLA 69
           GD LILIHV+PPNSDTP KLLFQD  SPLIPLE+FREIKLEKQYGL NDAEVLD+L +LA
Sbjct: 38  GDQLILIHVEPPNSDTPRKLLFQDTGSPLIPLEEFREIKLEKQYGLRNDAEVLDVLDSLA 97

Query: 70  TTKGVKVMAKVYWVIQERSCAKLLMILIFTHLFLEAEGIAWECEQPCGEKCFMSSNSGER 129
           T+KGV+V+AKVYW        + +  L    L L + G+                 S +R
Sbjct: 98  TSKGVRVVAKVYWGDPREKLCEAVEDLKLDSLVLGSRGLG----------------SIKR 157

Query: 130 EAIGTVKLQILIVKSSICP 148
             IG+V   +  VK++ CP
Sbjct: 158 VLIGSVSSYV--VKNASCP 158

[Close]

BLAST of CsGy5G013620 vs. ExPASy TrEMBL
Match: A0A0A0KMR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G348060 PE=4 SV=1)

HSP 1 Score: 305 bits (782), Expect = 1.12e-104
Identity = 156/164 (95.12%), Postives = 156/164 (95.12%), Query Frame = 0


Query: 1   MENSKNGI-----DGDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQYGL 60
           MENSKN       DGDHLILIHVQPPNSDTPTKLLFQD SSPLIPLEQFREIKLEKQYGL
Sbjct: 1   MENSKNAANNLLKDGDHLILIHVQPPNSDTPTKLLFQDTSSPLIPLEQFREIKLEKQYGL 60

Query: 61  SNDAEVLDILHNLATTKGVKVMAKVYWVIQERSCAKLLMILIFTHLFLEAEGIAWECEQP 120
           SNDAEVLDILHNLATTKGVKVMAKVYWVIQERSCAKLLMILIFTHLFLEAEGIAWECEQP
Sbjct: 61  SNDAEVLDILHNLATTKGVKVMAKVYWVIQERSCAKLLMILIFTHLFLEAEGIAWECEQP 120

Query: 121 CGEKCFMSSNSGEREAIGTVKLQILIVKSSICPFLLHLFIIYYT 159
           CGEKCFMSSNSGEREAIGTVKLQILIVKSSICPFLLHLFIIYYT
Sbjct: 121 CGEKCFMSSNSGEREAIGTVKLQILIVKSSICPFLLHLFIIYYT 164

[Close]

BLAST of CsGy5G013620 vs. ExPASy TrEMBL
Match: A0A5A7TTT6 (Universal stress protein A-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00860 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 3.78e-41
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 9  DGDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQYGLSNDAEVLDILHNL 68
          DGDHL+LIHVQPPNSDTPTKLLFQD  SPLIPLE+F EIKLEKQYGLSNDAEVLDILHNL
Sbjct: 21 DGDHLVLIHVQPPNSDTPTKLLFQDTGSPLIPLEEFGEIKLEKQYGLSNDAEVLDILHNL 80

Query: 69 ATTKGVKVMAKVYW 82
          ATTKGVKVMAKVYW
Sbjct: 81 ATTKGVKVMAKVYW 94

[Close]

BLAST of CsGy5G013620 vs. ExPASy TrEMBL
Match: A0A1S3CIK6 (universal stress protein A-like protein OS=Cucumis melo OX=3656 GN=LOC103501360 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 5.42e-41
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 9   DGDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQYGLSNDAEVLDILHNL 68
           DGDHL+LIHVQPPNSDTPTKLLFQD  SPLIPLE+F EIKLEKQYGLSNDAEVLDILHNL
Sbjct: 33  DGDHLVLIHVQPPNSDTPTKLLFQDTGSPLIPLEEFGEIKLEKQYGLSNDAEVLDILHNL 92

Query: 69  ATTKGVKVMAKVYW 82
           ATTKGVKVMAKVYW
Sbjct: 93  ATTKGVKVMAKVYW 106

[Close]

BLAST of CsGy5G013620 vs. ExPASy TrEMBL
Match: A0A6J1FK03 (universal stress protein A-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444924 PE=4 SV=1)

HSP 1 Score: 127 bits (319), Expect = 3.88e-34
Identity = 73/139 (52.52%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 10  GDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQYGLSNDAEVLDILHNLA 69
           GD LILIHV+PPNSDTP KLLFQD  SPLIPLE+FREIKLEKQYGL NDAEVLD+L +LA
Sbjct: 38  GDQLILIHVEPPNSDTPRKLLFQDTGSPLIPLEEFREIKLEKQYGLRNDAEVLDVLDSLA 97

Query: 70  TTKGVKVMAKVYWVIQERSCAKLLMILIFTHLFLEAEGIAWECEQPCGEKCFMSSNSGER 129
           T+KGV+V+AKVYW        + +  L    L L + G+                 S +R
Sbjct: 98  TSKGVRVVAKVYWGDPREKLCEAVEDLKLDSLVLGSRGLG----------------SIKR 157

Query: 130 EAIGTVKLQILIVKSSICP 148
             IG+V   +  VK++ CP
Sbjct: 158 VLIGSVSSYV--VKNASCP 158

[Close]

BLAST of CsGy5G013620 vs. ExPASy TrEMBL
Match: A0A6J1K109 (universal stress protein A-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489678 PE=4 SV=1)

HSP 1 Score: 124 bits (311), Expect = 6.26e-33
Identity = 59/73 (80.82%), Postives = 65/73 (89.04%), Query Frame = 0


Query: 10  GDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQYGLSNDAEVLDILHNLA 69
           GD LILIHV+PPNSDTP KLLFQ   SPLIPLE+FREIKLEKQYGL ND EVLD+L +LA
Sbjct: 38  GDQLILIHVEPPNSDTPRKLLFQHTGSPLIPLEEFREIKLEKQYGLRNDVEVLDVLDSLA 97

Query: 70  TTKGVKVMAKVYW 82
           TTKGV+V+AKVYW
Sbjct: 98  TTKGVRVVAKVYW 110

[Close]

BLAST of CsGy5G013620 vs. TAIR 10
Match: AT3G03270.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 9.7e-22
Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 9   DGDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQYGLSNDAEVLDILHNL 68
           DGD +ILIHVQP N+D   K+LF++  SPLIPLE+FRE+ L KQYGL+ D EVLD+L  L
Sbjct: 31  DGDTVILIHVQPQNADHTRKILFEETGSPLIPLEEFREVNLSKQYGLAYDPEVLDVLDTL 90

Query: 69  ATTKGVKVMAKVYW 83
           +  K VKV+AKVYW
Sbjct: 91  SRAKKVKVVAKVYW 104

[Close]

BLAST of CsGy5G013620 vs. TAIR 10
Match: AT3G03270.2 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 9.7e-22
Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 9   DGDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQYGLSNDAEVLDILHNL 68
           DGD +ILIHVQP N+D   K+LF++  SPLIPLE+FRE+ L KQYGL+ D EVLD+L  L
Sbjct: 31  DGDTVILIHVQPQNADHTRKILFEETGSPLIPLEEFREVNLSKQYGLAYDPEVLDVLDTL 90

Query: 69  ATTKGVKVMAKVYW 83
           +  K VKV+AKVYW
Sbjct: 91  SRAKKVKVVAKVYW 104

[Close]

BLAST of CsGy5G013620 vs. TAIR 10
Match: AT3G17020.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-09
Identity = 33/84 (39.29%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 9   DGDHLILIHV-QPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQYGLSNDAEVLDILHN 68
           DGDHLILI +    N +     L++   SP IP+ +F +  + K+Y L  DAE LDI++ 
Sbjct: 33  DGDHLILITIAHDMNYEEGEMQLWETVGSPFIPMSEFSDAAVMKKYALKPDAETLDIVNT 92

Query: 69  LATTKGVKVMAKVYW-VIQERSCA 91
            A  K + V+ K+YW   +E+ CA
Sbjct: 93  AARKKTITVVMKIYWGDPREKICA 116

[Close]

BLAST of CsGy5G013620 vs. TAIR 10
Match: AT3G53990.1 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 4.2e-09
Identity = 32/90 (35.56%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 2   ENSKNGI---------DGDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQ 61
           E+SKN +          GD + +IH  P + D     L+  + SPLIPL +FRE ++ ++
Sbjct: 15  ESSKNALKWAIENLADKGDTIYIIHTLPLSGDESRNSLWFKSGSPLIPLAEFREPEIMEK 74

Query: 62  YGLSNDAEVLDILHNLATTKGVKVMAKVYW 83
           YG+  D   LD+L   +  K V V+ K+YW
Sbjct: 75  YGVKTDIACLDMLDTGSRQKEVHVVTKLYW 104

[Close]

BLAST of CsGy5G013620 vs. TAIR 10
Match: AT3G53990.2 (Adenine nucleotide alpha hydrolases-like superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 4.4e-06
Identity = 28/82 (34.15%), Postives = 43/82 (52.44%), Query Frame = 0


Query: 2  ENSKNGI---------DGDHLILIHVQPPNSDTPTKLLFQDNSSPLIPLEQFREIKLEKQ 61
          E+SKN +          GD + +IH  P + D     L+  + SPLIPL +FRE ++ ++
Sbjct: 15 ESSKNALKWAIENLADKGDTIYIIHTLPLSGDESRNSLWFKSGSPLIPLAEFREPEIMEK 74

Query: 62 YGLSNDAEVLDILHNLATTKGV 75
          YG+  D   LD+L   +  K V
Sbjct: 75 YGVKTDIACLDMLDTGSRQKEV 96

The following BLAST results are available for this feature:

BLAST of CsGy5G013620 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G013620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655150.1	1.48e-43	76.42	LOW QUALITY PROTEIN: universal stress protein PHOS32 [Cucumis sativus]	[more]
KAA0046278.1	7.80e-41	93.24	universal stress protein A-like protein [Cucumis melo var. makuwa]	[more]
XP_008463151.1	1.12e-40	93.24	PREDICTED: universal stress protein A-like protein [Cucumis melo]	[more]
XP_038875204.1	6.79e-37	89.04	universal stress protein PHOS32 [Benincasa hispida]	[more]
XP_022938828.1	8.02e-34	52.52	universal stress protein A-like protein [Cucurbita moschata]	[more]

BLAST of CsGy5G013620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMR5	1.12e-104	95.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G348060 PE=4 SV=1	[more]
A0A5A7TTT6	3.78e-41	93.24	Universal stress protein A-like protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CIK6	5.42e-41	93.24	universal stress protein A-like protein OS=Cucumis melo OX=3656 GN=LOC103501360 ...	[more]
A0A6J1FK03	3.88e-34	52.52	universal stress protein A-like protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1K109	6.26e-33	80.82	universal stress protein A-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489...	[more]

BLAST of CsGy5G013620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03270.1	9.7e-22	63.51	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G03270.2	9.7e-22	63.51	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G17020.1	2.5e-09	39.29	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G53990.1	4.2e-09	35.56	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]
AT3G53990.2	4.4e-06	34.15	Adenine nucleotide alpha hydrolases-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46100	IMP2'P	coord: 9..150
None	No IPR available	PANTHER	PTHR46100:SF1	OS02G0773200 PROTEIN	coord: 9..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G013620.2	CsGy5G013620.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0043621	protein self-association