CsGy4G004940 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G004940
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	40S ribosomal protein SA
Location	Gy14Chr4: 3503410 .. 3506017 (+)
RNA-Seq Expression	CsGy4G004940
Synteny	CsGy4G004940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACCCTTTTCTTCAACACAAACTCAGCTTTTTTCATCAGAACATCCCTCTTCTTCCGTTCGCAGAATCCAACTCCTACAACTATATTTCTGCGGCGGCGGCGGCGGCGGCGGGGTGCGCTCTCTTGAACACATATTCCGTCAGCTTTTCACTATTGACCCATGTTTTTTTTTTTCTCTATATATTTATTTTTTAGAATTTTGTTCGTCTCTATTGAGATAGCTCGATGTAAGTATAGATATTGTATCAACCCTGATGTAAACCATGATTCACAGAGGTTTGGCAATGGCGACTGGTACAGAACAGTGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGTATTTTGTGAATACATTTCAGATTTATAGATCTTTGCTTTTTTTAAAATCTGTTAAGTGCTTCATAGACACTGATTATTAGGAGGCCTTTCCACTTATTTTCTCTTTGTTTTCAATGTTTTATAGATATTTAGCTTGAACTGGAATCTTAAGTCATTTAATGGGCGTGCTTTATCTATATTTCAAATCAGAGTTTGATCATAATTTCATTAATTCCCATGAATGGATATTTGTTCTCATGATGTAGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTCAAGATATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTCACCAACCAGCTTCAAACCTCATTCAATGAGCCACGCCTTCTGATATTGACTGATCCTCGAACTGATCATCAGGTGCTTTAACATCTTTAAGAATTAATTCTAGTTTGGGATTATAAGTTTGCGTTGAAGAGGATGGTTTTCTCTTACCAAATTTAGATTTACTCGTGTTTATTCCCTTAAGCATAAGCCATAGTTTATGCTTTACTTTAGTTGTTGGTGCTGCTATTTATGTTGCCTGGTTGGTTTATTTGCTTGTTGCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGTTTTGCAGATGCGTGGAACGGTTCGTCCTGGGTACAAATGGGACGTGATGGTAACTTCTTTACCTATCTGAACTTGAGAAATTGCATTATGACATGATATTTGAAATTGACACTTGATTGTTGGATGTTAAATCAAAGGCTTGGAAAGAATGGTAATGGTATGCACGTGTTTGTTGCACAGGTCGATTTGTTTTTCTACCGAGAGCCTGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCTGTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCAGTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGGTGCTCCTAATGTGGCTCCTACTGCTGCGGCTGCTTCAGTTTCTAATGCTGAGTGGGCACAAGAGTCAGGTTGAATCCGAGCCTTTTCTTTCTTGCTTATTTTAATAATTTAATCCTTTGCCATTGCCATTGCCATTGCTGTGTTTTACACTCCCAACTATTTTTTTAGGCTGTCATTTTTTCCTATAAATAATAGTGAAAGTTCCCAAGTCCCAAGGCTTTAGGCCTTGGGCTTTTAGAGCTTAACAAAAGGCGAGTGCTGATAAATGCGCCTCTCCTTTGAGGCGAGGTGCTAGCGTTGAGCCTTTTAAACACTGGTTTTAGGACGAGTGCATAAAAGGGTTTTATCGTGGATATTTATTTATTGTTCTTTTTACTTTTGCAGTCAGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGCTGCACCTCCTGCCTCCGATTGGTAACAAGGGAAGCTTTCCCTCTTACCCGCAATTTTGATTCATAGTTATGAGTTTCGCTTGTTCATGTAGCAGTGCCAGCAGAAGTAGGCTTAAACACTCAGTCTGTAAACCAAAGATGTAGTACCACCCTTTTTTTTTTCTTTCTCAAGACTGATTTACGTTTTCTTTCTTCTAGTCCAGTTTTAGGTTTTAAGATTGGACGTTTTTTTTACCTTCAACGTGGGTATTTTAGTTTGGTACAATTTTTTATGAGAAACAAAAAATAGCTCCAACTGTACCAAGACGAAATACTTTGTTCTACTGATGGAATTATGTACCATTATTGTGTTTGTAGCGGAGAATCTGTTGCCCTTATTTCACCTCAATCTGTTGCCGCGACCATTTTTTCTATTGGCTGGAATTGTATTCCTCGGAGAATGTTATATGAGATAATTGTCTTGTTGACTCAAAATTGAAGTCCAAAACGAAGGTTTGCATTTTCTTGAACTTTTTTTTTTTTTTTTCATTATCGACCAAAATTACTGAAATGATCTTATCGTGCC

mRNA sequence

ATGAAAACCCTTTTCTTCAACACAAACTCAGCTTTTTTCATCAGAACATCCCTCTTCTTCCGTTCGCAGAATCCAACTCCTACAACTATATTTCTGCGGCGGCGGCGGCGGCGGCGGGGTGCGCTCTCTTGAACACATATTCCGTCAGCTTTTCACTATTGACCCATGTTTTTTTTTTTCTCTATATATTTATTTTTTAGAATTTTGTTCGTCTCTATTGAGATAGCTCGATGTAAGTATAGATATTGTATCAACCCTGATGTAAACCATGATTCACAGAGGTTTGGCAATGGCGACTGGTACAGAACAGTGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTCAAGATATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTCACCAACCAGCTTCAAACCTCATTCAATGAGCCACGCCTTCTGATATTGACTGATCCTCGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGTTTTGCAGATGCGTGGAACGGTTCGTCCTGGGTACAAATGGGACGTGATGGTCGATTTGTTTTTCTACCGAGAGCCTGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCTGTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCAGTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGGTGCTCCTAATGTGGCTCCTACTGCTGCGGCTGCTTCAGTTTCTAATGCTGAGTGGGCACAAGAGTCAGTCAGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGCTGCACCTCCTGCCTCCGATTGGTAACAAGGGAAGCTTTCCCTCTTACCCGCAATTTTGATTCATAGTTATGAGTTTCGCTTGTTCATGTAGCAGTGCCAGCAGAAGTAGGCTTAAACACTCAGTCTGTAAACCAAAGATGTAGTACCACCCTTTTTTTTTTCTTTCTCAAGACTGATTTACGTTTTCTTTCTTCTAGTCCAGTTTTAGGTTTTAAGATTGGACGTTTTTTTTACCTTCAACGTGGGTATTTTAGTTTGGTACAATTTTTTATGAGAAACAAAAAATAGCTCCAACTGTACCAAGACGAAATACTTTGTTCTACTGATGGAATTATGTACCATTATTGTGTTTGTAGCGGAGAATCTGTTGCCCTTATTTCACCTCAATCTGTTGCCGCGACCATTTTTTCTATTGGCTGGAATTGTATTCCTCGGAGAATGTTATATGAGATAATTGTCTTGTTGACTCAAAATTGAAGTCCAAAACGAAGGTTTGCATTTTCTTGAACTTTTTTTTTTTTTTTTCATTATCGACCAAAATTACTGAAATGATCTTATCGTGCC

Coding sequence (CDS)

ATGATTCACAGAGGTTTGGCAATGGCGACTGGTACAGAACAGTGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTCAAGATATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTCACCAACCAGCTTCAAACCTCATTCAATGAGCCACGCCTTCTGATATTGACTGATCCTCGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGTTTTGCAGATGCGTGGAACGGTTCGTCCTGGGTACAAATGGGACGTGATGGTCGATTTGTTTTTCTACCGAGAGCCTGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCTGTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCAGTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGGTGCTCCTAATGTGGCTCCTACTGCTGCGGCTGCTTCAGTTTCTAATGCTGAGTGGGCACAAGAGTCAGTCAGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGCTGCACCTCCTGCCTCCGATTGGTAA

Protein sequence

MIHRGLAMATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW*

Homology

[Close]

BLAST of CsGy4G004940 vs. ExPASy Swiss-Prot
Match: O22518 (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.8e-125
Identity = 230/292 (78.77%), Postives = 242/292 (82.88%), Query Frame = 0


Query: 8   MATGTEQC-----QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGK 67
           MAT T        QLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGK
Sbjct: 1   MATATNAAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGK 60

Query: 68  TWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ 127
           TWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ
Sbjct: 61  TWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQ 120

Query: 128 TSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGC 187
           TSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGC
Sbjct: 121 TSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGC 180

Query: 188 LFWLLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP 247
           LFWLLARMVLQMRGT+RPG KWDVMVDLFFYREPEE K++EEEEA A  DY I DF +  
Sbjct: 181 LFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPA-VDYAITDFNAGA 240

Query: 248 VAVD-QW--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPP 292
           +A D QW    D  W      P  A   V+    A+    A   WG A+PPP
Sbjct: 241 IAADGQWPGTIDQSWSDAVPQPIPAVPGVNWGAPAEAPAAAGGDWGEAVPPP 291

[Close]

BLAST of CsGy4G004940 vs. ExPASy Swiss-Prot
Match: A5BUU4 (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 4.8e-123
Identity = 234/316 (74.05%), Postives = 250/316 (79.11%), Query Frame = 0


Query: 8   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 67
           MAT T    LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATPTR--ALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 68  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 127
           Q+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  QLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 128 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 187
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 188 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP---VA 247
           ARMVLQMR T+ PG+KWDVMVDLFFYREPEE KE+E +E VA PDYGI D+ +     + 
Sbjct: 181 ARMVLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLG 240

Query: 248 VDQW---VPDA-QWGA--PNVAPTAAAASVSNAEWAQESVR------AADGWGVAIPPPA 306
              W   + DA QWGA  P VAP  A   V  + W   +        A DGW  A  PP 
Sbjct: 241 GGDWGAPITDAPQWGADVPAVAPIPA---VPGSNWGDAAPMPSAVPIATDGWDAAAAPPV 300

[Close]

BLAST of CsGy4G004940 vs. ExPASy Swiss-Prot
Match: O80377 (40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 8.2e-123
Identity = 226/298 (75.84%), Postives = 245/298 (82.21%), Query Frame = 0


Query: 8   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 67
           MA+G    +LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MASGAR--ELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 68  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 127
            +AARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  MLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 128 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 187
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 188 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPV-AVD 247
           ARMVLQMRG +  G+KW+VMVDLFFYREPEE K++EEE+ +   DY +AD+ +AP+   D
Sbjct: 181 ARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEED-LPVGDY-VADYAAAPIGGAD 240

Query: 248 QW--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPA 303
           QW  +PDAQWG   V P  A ++V    W      A DGW  A  PP P       PA
Sbjct: 241 QWNAIPDAQWGGDVVQP--ANSAVPAGTWTDAGPIAGDGWDAAAAPPVPGAVGLDVPA 292

[Close]

BLAST of CsGy4G004940 vs. ExPASy Swiss-Prot
Match: O65751 (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 1.8e-122
Identity = 229/304 (75.33%), Postives = 248/304 (81.58%), Query Frame = 0


Query: 8   MATGTEQC-QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 67
           MAT T    QL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 68  LQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 127
           L +AAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 128 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 187
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 188 LARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVD 247
           LARMVLQMRGT+RPG KWDVMVDLFFYREPEE K+ EE+E VA PDY IADF  + +  D
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDE-VAAPDYAIADFNVSAIPSD 240

Query: 248 -QW--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPP--APSLEAAAPP 306
            QW    D  W      P  A  +V+   WA     A D WG A+PPP   P+    + P
Sbjct: 241 GQWPAAIDQPWNDAVPQPIPAVPAVN---WAAPEAVAGD-WGEAVPPPQQIPTAGIESVP 299

[Close]

BLAST of CsGy4G004940 vs. ExPASy Swiss-Prot
Match: Q08682 (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3)

HSP 1 Score: 426.0 bits (1094), Expect = 3.6e-118
Identity = 219/308 (71.10%), Postives = 242/308 (78.57%), Query Frame = 0


Query: 6   LAMATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 65
           +A        QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 66  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 125
           KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 126 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 185
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 186 LLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYG---IADFGSAP 245
           LLARMVLQMRGT+  G KWDVMVDLFFYREPEE K ++E+EA    +YG     ++G   
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGM-- 240

Query: 246 VAVDQW----VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAAD-GWGVAIPPPAPSLEA 305
           V  DQW    +PDA W     AP +AA +   A W+  +   AD GW  A PP       
Sbjct: 241 VGGDQWTTAQIPDAAWPGEGQAPISAAPAA--ASWSDSAAAPADGGWEAAAPP------- 297

[Close]

BLAST of CsGy4G004940 vs. NCBI nr
Match: XP_011653139.1 (40S ribosomal protein SA [Cucumis sativus] >XP_031739535.1 40S ribosomal protein SA [Cucumis sativus] >KGN53260.1 hypothetical protein Csa_015332 [Cucumis sativus])

HSP 1 Score: 604 bits (1558), Expect = 5.39e-218
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 8   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 67
           MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 68  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 127
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 128 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 187
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 188 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 247
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240

Query: 248 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 305
           WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
Sbjct: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 298

[Close]

BLAST of CsGy4G004940 vs. NCBI nr
Match: XP_008453731.1 (PREDICTED: 40S ribosomal protein SA-like [Cucumis melo] >KAA0044754.1 40S ribosomal protein SA-like [Cucumis melo var. makuwa] >TYK16708.1 40S ribosomal protein SA-like [Cucumis melo var. makuwa])

HSP 1 Score: 580 bits (1496), Expect = 1.52e-208
Identity = 287/298 (96.31%), Postives = 290/298 (97.32%), Query Frame = 0


Query: 8   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 67
           MATG EQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 68  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 127
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 128 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 187
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 188 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 247
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+AVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 248 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 305
           WVPDAQW A NVAPTAAAASVSN EWAQE V AADGWGVAIPPPAPSLEA APP+SDW
Sbjct: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 298

[Close]

BLAST of CsGy4G004940 vs. NCBI nr
Match: XP_022136902.1 (40S ribosomal protein SA-like [Momordica charantia] >XP_022136903.1 40S ribosomal protein SA-like [Momordica charantia])

HSP 1 Score: 536 bits (1380), Expect = 7.83e-191
Identity = 269/301 (89.37%), Postives = 278/301 (92.36%), Query Frame = 0


Query: 8   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 67
           MATGT Q QLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60

Query: 68  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 127
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 128 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 187
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 188 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 247
           ARMVLQMRGT+R G+KWDVMVDLFFYREPEE KE EEEEAVAPPDYGIADFG+AP+AVDQ
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQ 240

Query: 248 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVR--AADGWGVAIP-PPAPSLEAAAPPASD 305
           W PDAQWGA +V P AAAA  SN EWAQE V   AADGW  A+  PPAP +EA APPASD
Sbjct: 241 WAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPPASD 300

[Close]

BLAST of CsGy4G004940 vs. NCBI nr
Match: XP_022942879.1 (40S ribosomal protein SA-like [Cucurbita moschata])

HSP 1 Score: 531 bits (1367), Expect = 8.07e-189
Identity = 267/302 (88.41%), Postives = 278/302 (92.05%), Query Frame = 0


Query: 8   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 67
           MATGTEQ QL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 68  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 127
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 128 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 187
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 188 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 247
           ARMVLQMRGTVRPG+KWDVMVDLFFYREPEE KEKEEE+AVAPPDYGIADFG+AP+  D+
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 248 WVPDAQWGAPNVAPTAAAAS--VSNAEWAQESVR---AADGWGVAIPPPAPSLEAAAPPA 304
           WV DAQW AP++ P AAAA+  VSN EWA E V    AADGW VA  PPAP LEA APPA
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 300

[Close]

BLAST of CsGy4G004940 vs. NCBI nr
Match: KAG6600605.1 (40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 530 bits (1365), Expect = 1.75e-188
Identity = 267/304 (87.83%), Postives = 278/304 (91.45%), Query Frame = 0


Query: 8   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 67
           MATGTEQ QL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 68  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 127
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 128 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 187
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 188 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 247
           ARMVLQMRGTVRPG+KWDVMVDLFFYREPEE KEKEEE+AVAPPDYGIADFG+AP+  D+
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 248 WVPDAQWGAPNVAPTAAAAS----VSNAEWAQESVR---AADGWGVAIPPPAPSLEAAAP 304
           WV DAQW AP++ P AAAA+    VSN EWA E V    AADGW VA  PPAP LEA AP
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAP 300

[Close]

BLAST of CsGy4G004940 vs. ExPASy TrEMBL
Match: A0A0A0KUD9 (40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_4G038770 PE=3 SV=1)

HSP 1 Score: 604 bits (1558), Expect = 2.61e-218
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 8   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 67
           MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 68  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 127
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 128 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 187
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 188 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 247
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240

Query: 248 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 305
           WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
Sbjct: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 298

[Close]

BLAST of CsGy4G004940 vs. ExPASy TrEMBL
Match: A0A5A7TNP4 (40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005420 PE=3 SV=1)

HSP 1 Score: 580 bits (1496), Expect = 7.38e-209
Identity = 287/298 (96.31%), Postives = 290/298 (97.32%), Query Frame = 0


Query: 8   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 67
           MATG EQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 68  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 127
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 128 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 187
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 188 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 247
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+AVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 248 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 305
           WVPDAQW A NVAPTAAAASVSN EWAQE V AADGWGVAIPPPAPSLEA APP+SDW
Sbjct: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 298

[Close]

BLAST of CsGy4G004940 vs. ExPASy TrEMBL
Match: A0A1S3BXR8 (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103494374 PE=3 SV=1)

HSP 1 Score: 580 bits (1496), Expect = 7.38e-209
Identity = 287/298 (96.31%), Postives = 290/298 (97.32%), Query Frame = 0


Query: 8   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 67
           MATG EQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 68  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 127
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 128 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 187
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 188 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 247
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+AVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 248 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 305
           WVPDAQW A NVAPTAAAASVSN EWAQE V AADGWGVAIPPPAPSLEA APP+SDW
Sbjct: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 298

[Close]

BLAST of CsGy4G004940 vs. ExPASy TrEMBL
Match: A0A6J1C6Q9 (40S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111008481 PE=3 SV=1)

HSP 1 Score: 536 bits (1380), Expect = 3.79e-191
Identity = 269/301 (89.37%), Postives = 278/301 (92.36%), Query Frame = 0


Query: 8   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 67
           MATGT Q QLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60

Query: 68  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 127
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 128 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 187
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 188 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 247
           ARMVLQMRGT+R G+KWDVMVDLFFYREPEE KE EEEEAVAPPDYGIADFG+AP+AVDQ
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQ 240

Query: 248 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVR--AADGWGVAIP-PPAPSLEAAAPPASD 305
           W PDAQWGA +V P AAAA  SN EWAQE V   AADGW  A+  PPAP +EA APPASD
Sbjct: 241 WAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPPASD 300

[Close]

BLAST of CsGy4G004940 vs. ExPASy TrEMBL
Match: A0A6J1FSL7 (40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111447777 PE=3 SV=1)

HSP 1 Score: 531 bits (1367), Expect = 3.91e-189
Identity = 267/302 (88.41%), Postives = 278/302 (92.05%), Query Frame = 0


Query: 8   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 67
           MATGTEQ QL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 68  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 127
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 128 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 187
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 188 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 247
           ARMVLQMRGTVRPG+KWDVMVDLFFYREPEE KEKEEE+AVAPPDYGIADFG+AP+  D+
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 248 WVPDAQWGAPNVAPTAAAAS--VSNAEWAQESVR---AADGWGVAIPPPAPSLEAAAPPA 304
           WV DAQW AP++ P AAAA+  VSN EWA E V    AADGW VA  PPAP LEA APPA
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 300

[Close]

BLAST of CsGy4G004940 vs. TAIR 10
Match: AT1G72370.1 (40s ribosomal protein SA )

HSP 1 Score: 426.0 bits (1094), Expect = 2.5e-119
Identity = 219/308 (71.10%), Postives = 242/308 (78.57%), Query Frame = 0


Query: 6   LAMATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 65
           +A        QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 66  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 125
           KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 126 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 185
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 186 LLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYG---IADFGSAP 245
           LLARMVLQMRGT+  G KWDVMVDLFFYREPEE K ++E+EA    +YG     ++G   
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGM-- 240

Query: 246 VAVDQW----VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAAD-GWGVAIPPPAPSLEA 305
           V  DQW    +PDA W     AP +AA +   A W+  +   AD GW  A PP       
Sbjct: 241 VGGDQWTTAQIPDAAWPGEGQAPISAAPAA--ASWSDSAAAPADGGWEAAAPP------- 297

[Close]

BLAST of CsGy4G004940 vs. TAIR 10
Match: AT1G72370.2 (40s ribosomal protein SA )

HSP 1 Score: 422.2 bits (1084), Expect = 3.7e-118
Identity = 218/307 (71.01%), Postives = 240/307 (78.18%), Query Frame = 0


Query: 6   LAMATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 65
           +A        QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 66  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 125
           KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 126 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 185
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 186 LLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYG---IADFGSAP 245
           LLARMVLQMRGT+  G KWDVMVDLFFYREPEE K ++E+EA    +YG     ++G   
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGM-- 240

Query: 246 VAVDQW----VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAA 305
           V  DQW    +PDA W     AP +AA +   A W+     A  GW  A PP       +
Sbjct: 241 VGGDQWTTAQIPDAAWPGEGQAPISAAPAA--ASWSDS---ADGGWEAAAPP-------S 293

[Close]

BLAST of CsGy4G004940 vs. TAIR 10
Match: AT3G04770.2 (40s ribosomal protein SA B )

HSP 1 Score: 409.5 bits (1051), Expect = 2.4e-114
Identity = 212/303 (69.97%), Postives = 235/303 (77.56%), Query Frame = 0


Query: 7   AMATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 66
           A    T   Q+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+K
Sbjct: 3   ANGVATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDK 62

Query: 67  LQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 126
           LQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTPGTFTNQ+QTSF+
Sbjct: 63  LQMAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFS 122

Query: 127 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 186
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWL
Sbjct: 123 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWL 182

Query: 187 LARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVD 246
           LARMVLQMRGT+    KWDVMVDLFFYREPEE K++ +EEA    DYG+       V  D
Sbjct: 183 LARMVLQMRGTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADYGM-------VGGD 242

Query: 247 QW----VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPA 306
           QW    + DA W      P +AA +V         V  A GW           EAA+ PA
Sbjct: 243 QWTTAQISDAAWSGEVEQPISAAPAV--------GVTVAAGW-----------EAASVPA 279

[Close]

BLAST of CsGy4G004940 vs. TAIR 10
Match: AT3G04770.1 (40s ribosomal protein SA B )

HSP 1 Score: 364.8 bits (935), Expect = 6.9e-101
Identity = 174/203 (85.71%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 7   AMATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 66
           A    T   Q+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+K
Sbjct: 3   ANGVATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDK 62

Query: 67  LQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 126
           LQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTPGTFTNQ+QTSF+
Sbjct: 63  LQMAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFS 122

Query: 127 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 186
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWL
Sbjct: 123 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWL 182

Query: 187 LARMVLQMRGTVRPGYKWDVMVD 210
           LARMVLQMRGT+    KWDVMV+
Sbjct: 183 LARMVLQMRGTILAAQKWDVMVN 205

The following BLAST results are available for this feature:

BLAST of CsGy4G004940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22518	1.8e-125	78.77	40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1	[more]
A5BUU4	4.8e-123	74.05	40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV...	[more]
O80377	8.2e-123	75.84	40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1	[more]
O65751	1.8e-122	75.33	40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1	[more]
Q08682	3.6e-118	71.10	40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3	[more]

BLAST of CsGy4G004940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653139.1	5.39e-218	100.00	40S ribosomal protein SA [Cucumis sativus] >XP_031739535.1 40S ribosomal protein...	[more]
XP_008453731.1	1.52e-208	96.31	PREDICTED: 40S ribosomal protein SA-like [Cucumis melo] >KAA0044754.1 40S riboso...	[more]
XP_022136902.1	7.83e-191	89.37	40S ribosomal protein SA-like [Momordica charantia] >XP_022136903.1 40S ribosoma...	[more]
XP_022942879.1	8.07e-189	88.41	40S ribosomal protein SA-like [Cucurbita moschata]	[more]
KAG6600605.1	1.75e-188	87.83	40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CsGy4G004940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUD9	2.61e-218	100.00	40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_4G038770 PE=3 SV=1	[more]
A0A5A7TNP4	7.38e-209	96.31	40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BXR8	7.38e-209	96.31	40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103494374 PE=3 SV=1	[more]
A0A6J1C6Q9	3.79e-191	89.37	40S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111008481 PE=3 SV=...	[more]
A0A6J1FSL7	3.91e-189	88.41	40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111447777 PE=3 SV=1	[more]

BLAST of CsGy4G004940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72370.1	2.5e-119	71.10	40s ribosomal protein SA	[more]
AT1G72370.2	3.7e-118	71.01	40s ribosomal protein SA	[more]
AT3G04770.2	2.4e-114	69.97	40s ribosomal protein SA B	[more]
AT3G04770.1	6.9e-101	85.71	40s ribosomal protein SA B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001865	Ribosomal protein S2	PRINTS	PR00395	RIBOSOMALS2	coord: 24..42 score: 36.11 coord: 145..156 score: 51.15 coord: 103..120 score: 47.01 coord: 128..145 score: 44.62 coord: 54..63 score: 64.92 coord: 166..180 score: 53.64
IPR001865	Ribosomal protein S2	PFAM	PF00318	Ribosomal_S2	coord: 27..120 e-value: 2.4E-13 score: 49.8 coord: 126..191 e-value: 5.0E-12 score: 45.5
IPR001865	Ribosomal protein S2	CDD	cd01425	RPS2	coord: 27..193 e-value: 2.68239E-73 score: 222.072
IPR005707	Ribosomal protein S2, eukaryotic/archaeal	TIGRFAM	TIGR01012	TIGR01012	coord: 19..215 e-value: 3.0E-96 score: 318.6
IPR005707	Ribosomal protein S2, eukaryotic/archaeal	PANTHER	PTHR11489	40S RIBOSOMAL PROTEIN SA	coord: 8..293
None	No IPR available	GENE3D	3.40.50.10490		coord: 23..229 e-value: 8.8E-104 score: 347.2
None	No IPR available	PANTHER	PTHR11489:SF25	40S RIBOSOMAL PROTEIN SA	coord: 8..293
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00962	RIBOSOMAL_S2_1	coord: 24..35
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00963	RIBOSOMAL_S2_2	coord: 128..152
IPR027498	Ribosomal protein S2, eukaryotic	HAMAP	MF_03015	Ribosomal_S2_euk	coord: 9..276 score: 50.70145
IPR023591	Ribosomal protein S2, flavodoxin-like domain superfamily	SUPERFAMILY	52313	Ribosomal protein S2	coord: 19..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G004940.1	CsGy4G004940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome