CsGy3G044840 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAGTTTTTATTGAATTTAGAGAGTTTGGCTCAAAGGGGTGATTTTAGTGAAATTAGGGTTTGACGTTTGCATTCACTTCCCTTCTCTCCTTCCCTTCCCCTTTGCCGGCGCTTCTTTCTCCGTTGCACCGCCGCTATCCAGCCTCTCCACGCTGCACCTGAGTTCTCTACCCCCTCCTTATTATTTCTTTTTTCACTTCATATCTCTTTCTCCACCGTTCTCAGTTCCATCGTGGATCTTCTCTTTCTCTTCTTGTATCGAAATTGCGGGTAAATTTCCTCCTCTTTTTTTTATACGATTTTCGAACTTCTTCCATCTTTTCCTTTACCTGTTTCACTTCGCTGGTAAATATTATGGTTTTTTTTTTTGTTTTTTTTTCCTGAATTGAACCTGGGTAGCTGGGCTTCTGTTCTAAGTTCAAGTTCAAGCTCTGTTCATAAATTTATAGGTTGCTATTGTGAGGTTGCTCTGTTCATAATTTTTACTCCTCTGTTCATAATTTTAATAAGATTAAAGAATATTTATGAATGAATGCCATACTAAAGTTTAAAAAACGAAGACCGAAATTGGGTTTTATGCAAACATTAGAAATTGAACCAAAGCTTTACTTAAAAAGTTTAAAACTAAATTTTGGTGAAGTTTAGGGCCAAAATTAGATTCAAACTTGAAGCCTTAGGACGTTCCATGGATATGATTTGTTAAAGAAATGTCTAAATGCAAATTAGATTTGCAGTTATCCTTAGGAAGATTTGAAAAGGGGAGATTTAGGATTTATTTAGATTATGGCTGTGTGTCTAAATCTCCTACCTTGGATGATGATTTTTTTGAGTTTTGAGATGAGAATCAATTGAGTATTTCTTCCTTTCCTGCCTGCCAAGATGAGCGTAATTTAGTAGTTAAGGGTATCGACTTGATGCGGATCTAACTCAATTCACAATGGAGACTTATATAAAGTTCTGAAAAGAAATTGGGACCAAGTGTCTAAAATCTATTCATCTATCAAAGTGTAGGGATTGAATTGATATACTTACAAATATTCCAATGTATAACTTAAAGACATTTTGAGATATAAGGAATAATGTGTGAAACATATCCCATAGTTTTTGTAGTTTAGACACTTGTAATTAAGTTAGCCCCCAAAGGCCAACCCTTATTTATTTATTATTCATCATTTTTGCATCTTTTCTTTTTGTTCATATTTGGATCTTTATCCAGCAATGAAGCAGCCTTATTTGATACCATATGTCAGTGTGCTTTCAAAGCAGCTCCCAAAGGTCAAACAAAACATACACATGCCCTTCCCCTTATTTCTATCTATTTCTCTTCTTACATTTTAAATTTACATAAATTGTGTATATGTATTATATGTACTTTGCTATTTATGGTGATTGTAATGAATGTGTATGAGAGTCTAACATTATTAAAATTGGTTATTTTGCAATCACCATTTGAAAGAAAGAAAGAAGAGAGAAAAGAGAGAGGGGAAAAAACCCCGACCCGATCCCCGTTGACCCAACCCGACTCGGGTCATAACTGAAACAGCCCCGAATATGCTCACTACTTTAAATTGGAACTTCTTTTATGCTCACTCTTGTATAGGCTACAGTTGGTCTCCTACAGTACTTGCTGATTTTTTTTTTTCCACCTTTTTTTCTATAGGTGAGTTACTATGGCTATGGCAGAAGAGGATCCTAAGCCACTTGCATATATACCGGAGATTATACTGAAGAAAAGAAAGGTAAATGAAGCAGCGGCATTGAGAAGAAAGGAGCAGTTGGAGTTAAGGAAGCTTAGTTCGAAGAAAAACAAGGATGGTTTTATTAAACTACCTGAGGAATTTGTCAGAGAATATCGTGCTAGGGTAACTCATCTATTTTGAATTTCATTGTGATATGTGTTTAATTTTTGTGTTTTGTTTATCTATCACATCACATGTAATATCCTTTTGAGTTTGCCTTTGGGATATCAAAGGGTAGATATTTTGATGAAGTTTGCATTTTTCTTTGACCCTTTTATACATTCAGTTATATGATATAAATCTCCAGCACTTATTCTTCTTACGTGCAAATTATTGTTTTTATTTTTTTGAATCGTAGCATATGTGTTTGGTTCTGAAGGTATCAGGTTGGGCAGACAACTCCTCTTAATCACGTTTTTAGTTTATTCTAATTGGATTCGCTAGGAGAATGTGACATGACATGTTAAATCTTGTGTCTGTATTTTTAGTTTTAAGGTGTTTGATAGGCGTTTTGTTAGAATGACATTTGAAAATATCTTCTGGTGGAATTTAACTTCAGGCCTATAGTTCCTAGCTGGCGACGCATTTATGACTCTTTTTTACTTCCATACAATCCTGGTTATGTAGGAACTGGACCTTGTCAAAATGAAGCACAGGATAAAGAGAAAAAGATCTGCTATTGTGCCATCAACATCTAAATTGATTTTTATAATTCGGATACAGGGGTAAGAGTGTTTTCTCATTGTCTTTCATCCCCTTCCCATTTTCTTTTGTAGCTTCTTGAGATCAATAATTCCTTCTACATTTTTCCAGCAAGAACGACATGCATCCAAAGACAAGGAAGATCTTATATAGTCTCGGATTAAGTAGAATTTTCAGCGCAGTTTTTGCCAAGGCTAATGAGAGTATTCTAGGGAAGCTACAGAGGGTGGAGCCATACGTGACATATGGGTATGGGAACCATAAAACTTCTTATATTAGCTCCTTTATTGGATTTTACTCTTTTGTTGTCCATGATTGTACTGAAATTTTAGCTGAATTTCAGATACCCTAATCTGAAAAATGTGAGGGAGCTCGTATATAAGAAGGGATTCGCAAAGATAGACAAACAAAGAGTTCCTCTGACTGATAACAACATTATTGAACAGGTATTGGAAAAACCATCTTAATTACTTTACCGTCATTAGTCTGTTTCACTGTACTAATTTGATGGCGTAAATTTCAGGCATTGGGGAAACATGGTATCGTGTGCATGGAAGATATGGTGCATGAAATCGCTAATGTTGGCCCTCATTTTAAGGAGGTAATTTCCTTTTTATGGCCATTTGAACTTGAAAAGCCAGGAGGGGGCTGCCTTCAAGGGAAAAAGTCATCGTACAAGGAAGGTGGAGATAGTGGTAATAGAGAAGATGACATCAATGATCTGATTAATGAGATGAATTAGGCAAAAGCCTGAAGGGGGAATATCCAGTAGTTTCTGTAATGCAATTTTTGTAGGCTACAATGAGTTTGTATCTTGTTCAACTCATTTGCTTCATATGTTTTGGGTTTTTTTACGTTATTTCTTATGTCCTAGAGAAAAAAGGAAAAGCTTGGATCTGTTATATATTTAACAACATAATATCATCCACAAAGCCTTCCTCTTGGTAGACATTTTGTCTCTACTAGTTTGTTTCACTAGATTCTTGTTTTTGAATATGATGAATCAACGTAACCGAGAAAGCTTGGATCTGTTATATCTTTCTTTTCTCTTCCTGATTTGGGTTTTGA TGAAGTTTTTATTGAATTTAGAGAGTTTGGCTCAAAGGGGTGATTTTAGTGAAATTAGGGTTTGACGTTTGCATTCACTTCCCTTCTCTCCTTCCCTTCCCCTTTGCCGGCGCTTCTTTCTCCGTTGCACCGCCGCTATCCAGCCTCTCCACGCTGCACCTGAGTTCTCTACCCCCTCCTTATTATTTCTTTTTTCACTTCATATCTCTTTCTCCACCGTTCTCAGTTCCATCGTGGATCTTCTCTTTCTCTTCTTGTATCGAAATTGCGGGTGAGTTACTATGGCTATGGCAGAAGAGGATCCTAAGCCACTTGCATATATACCGGAGATTATACTGAAGAAAAGAAAGGTAAATGAAGCAGCGGCATTGAGAAGAAAGGAGCAGTTGGAGTTAAGGAAGCTTAGTTCGAAGAAAAACAAGGATGGTTTTATTAAACTACCTGAGGAATTTGTCAGAGAATATCGTGCTAGGGAACTGGACCTTGTCAAAATGAAGCACAGGATAAAGAGAAAAAGATCTGCTATTGTGCCATCAACATCTAAATTGATTTTTATAATTCGGATACAGGGCAAGAACGACATGCATCCAAAGACAAGGAAGATCTTATATAGTCTCGGATTAAGTAGAATTTTCAGCGCAGTTTTTGCCAAGGCTAATGAGAGTATTCTAGGGAAGCTACAGAGGGTGGAGCCATACGTGACATATGGATACCCTAATCTGAAAAATGTGAGGGAGCTCGTATATAAGAAGGGATTCGCAAAGATAGACAAACAAAGAGTTCCTCTGACTGATAACAACATTATTGAACAGGCATTGGGGAAACATGGTATCGTGTGCATGGAAGATATGGTGCATGAAATCGCTAATGTTGGCCCTCATTTTAAGGAGGTAATTTCCTTTTTATGGCCATTTGAACTTGAAAAGCCAGGAGGGGGCTGCCTTCAAGGGAAAAAGTCATCGTACAAGGAAGGTGGAGATAGTGGTAATAGAGAAGATGACATCAATGATCTGATTAATGAGATGAATTAGGCAAAAGCCTGAAGGGGGAATATCCAGTAGTTTCTGTAATGCAATTTTTGTAGGCTACAATGAGTTTGTATCTTGTTCAACTCATTTGCTTCATATGTTTTGGGTTTTTTTACGTTATTTCTTATGTCCTAGAGAAAAAAGGAAAAGCTTGGATCTGTTATATATTTAACAACATAATATCATCCACAAAGCCTTCCTCTTGGTAGACATTTTGTCTCTACTAGTTTGTTTCACTAGATTCTTGTTTTTGAATATGATGAATCAACGTAACCGAGAAAGCTTGGATCTGTTATATCTTTCTTTTCTCTTCCTGATTTGGGTTTTGA ATGGCTATGGCAGAAGAGGATCCTAAGCCACTTGCATATATACCGGAGATTATACTGAAGAAAAGAAAGGTAAATGAAGCAGCGGCATTGAGAAGAAAGGAGCAGTTGGAGTTAAGGAAGCTTAGTTCGAAGAAAAACAAGGATGGTTTTATTAAACTACCTGAGGAATTTGTCAGAGAATATCGTGCTAGGGAACTGGACCTTGTCAAAATGAAGCACAGGATAAAGAGAAAAAGATCTGCTATTGTGCCATCAACATCTAAATTGATTTTTATAATTCGGATACAGGGCAAGAACGACATGCATCCAAAGACAAGGAAGATCTTATATAGTCTCGGATTAAGTAGAATTTTCAGCGCAGTTTTTGCCAAGGCTAATGAGAGTATTCTAGGGAAGCTACAGAGGGTGGAGCCATACGTGACATATGGATACCCTAATCTGAAAAATGTGAGGGAGCTCGTATATAAGAAGGGATTCGCAAAGATAGACAAACAAAGAGTTCCTCTGACTGATAACAACATTATTGAACAGGCATTGGGGAAACATGGTATCGTGTGCATGGAAGATATGGTGCATGAAATCGCTAATGTTGGCCCTCATTTTAAGGAGGTAATTTCCTTTTTATGGCCATTTGAACTTGAAAAGCCAGGAGGGGGCTGCCTTCAAGGGAAAAAGTCATCGTACAAGGAAGGTGGAGATAGTGGTAATAGAGAAGATGACATCAATGATCTGATTAATGAGATGAATTAG MAMAEEDPKPLAYIPEIILKKRKVNEAAALRRKEQLELRKLSSKKNKDGFIKLPEEFVREYRARELDLVKMKHRIKRKRSAIVPSTSKLIFIIRIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVEPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALGKHGIVCMEDMVHEIANVGPHFKEVISFLWPFELEKPGGGCLQGKKSSYKEGGDSGNREDDINDLINEMN* Homology
BLAST of CsGy3G044840 vs. ExPASy Swiss-Prot
Match: Q9SAI5 (60S ribosomal protein L7-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7A PE=2 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 3.0e-75 Identity = 145/247 (58.70%), Postives = 186/247 (75.30%), Query Frame = 0
BLAST of CsGy3G044840 vs. ExPASy Swiss-Prot
Match: P60040 (60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 2.2e-65 Identity = 123/236 (52.12%), Postives = 172/236 (72.88%), Query Frame = 0
BLAST of CsGy3G044840 vs. ExPASy Swiss-Prot
Match: Q9LHP1 (60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 4.1e-64 Identity = 122/247 (49.39%), Postives = 177/247 (71.66%), Query Frame = 0
BLAST of CsGy3G044840 vs. ExPASy Swiss-Prot
Match: P60039 (60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 6.0e-63 Identity = 119/236 (50.42%), Postives = 171/236 (72.46%), Query Frame = 0
BLAST of CsGy3G044840 vs. ExPASy Swiss-Prot
Match: Q7SBD5 (60S ribosomal protein L7 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=rpl-7 PE=3 SV=2) HSP 1 Score: 228.0 bits (580), Expect = 1.2e-58 Identity = 113/236 (47.88%), Postives = 165/236 (69.92%), Query Frame = 0
BLAST of CsGy3G044840 vs. NCBI nr
Match: XP_031739353.1 (60S ribosomal protein L7-1 [Cucumis sativus] >KAE8651471.1 hypothetical protein Csa_000852 [Cucumis sativus]) HSP 1 Score: 487 bits (1254), Expect = 2.03e-173 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
BLAST of CsGy3G044840 vs. NCBI nr
Match: XP_031737493.1 (60S ribosomal protein L7-1-like [Cucumis sativus] >KAE8651461.1 hypothetical protein Csa_002282 [Cucumis sativus]) HSP 1 Score: 484 bits (1245), Expect = 4.77e-172 Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of CsGy3G044840 vs. NCBI nr
Match: XP_008465636.1 (PREDICTED: 60S ribosomal protein L7-1 [Cucumis melo] >KAA0038501.1 60S ribosomal protein L7-1 [Cucumis melo var. makuwa] >TYK31095.1 60S ribosomal protein L7-1 [Cucumis melo var. makuwa]) HSP 1 Score: 469 bits (1207), Expect = 3.07e-166 Identity = 240/250 (96.00%), Postives = 247/250 (98.80%), Query Frame = 0
BLAST of CsGy3G044840 vs. NCBI nr
Match: XP_038886994.1 (60S ribosomal protein L7-1-like [Benincasa hispida] >XP_038886995.1 60S ribosomal protein L7-1-like [Benincasa hispida]) HSP 1 Score: 462 bits (1188), Expect = 2.33e-163 Identity = 235/249 (94.38%), Postives = 242/249 (97.19%), Query Frame = 0
BLAST of CsGy3G044840 vs. NCBI nr
Match: KAA0038503.1 (60S ribosomal protein L7-1 [Cucumis melo var. makuwa] >TYK31097.1 60S ribosomal protein L7-1 [Cucumis melo var. makuwa]) HSP 1 Score: 462 bits (1190), Expect = 3.25e-161 Identity = 236/247 (95.55%), Postives = 244/247 (98.79%), Query Frame = 0
BLAST of CsGy3G044840 vs. ExPASy TrEMBL
Match: A0A5D3E729 (60S ribosomal protein L7-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003720 PE=3 SV=1) HSP 1 Score: 469 bits (1207), Expect = 1.49e-166 Identity = 240/250 (96.00%), Postives = 247/250 (98.80%), Query Frame = 0
BLAST of CsGy3G044840 vs. ExPASy TrEMBL
Match: A0A1S3CPC0 (60S ribosomal protein L7-1 OS=Cucumis melo OX=3656 GN=LOC103503275 PE=3 SV=1) HSP 1 Score: 469 bits (1207), Expect = 1.49e-166 Identity = 240/250 (96.00%), Postives = 247/250 (98.80%), Query Frame = 0
BLAST of CsGy3G044840 vs. ExPASy TrEMBL
Match: A0A5D3E4T2 (60S ribosomal protein L7-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003740 PE=3 SV=1) HSP 1 Score: 462 bits (1190), Expect = 1.57e-161 Identity = 236/247 (95.55%), Postives = 244/247 (98.79%), Query Frame = 0
BLAST of CsGy3G044840 vs. ExPASy TrEMBL
Match: A0A6J1DN17 (60S ribosomal protein L7-1-like OS=Momordica charantia OX=3673 GN=LOC111021521 PE=3 SV=1) HSP 1 Score: 449 bits (1155), Expect = 1.12e-158 Identity = 223/247 (90.28%), Postives = 238/247 (96.36%), Query Frame = 0
BLAST of CsGy3G044840 vs. ExPASy TrEMBL
Match: A0A6J1I831 (60S ribosomal protein L7-1-like OS=Cucurbita maxima OX=3661 GN=LOC111470044 PE=3 SV=1) HSP 1 Score: 439 bits (1128), Expect = 1.41e-154 Identity = 222/247 (89.88%), Postives = 234/247 (94.74%), Query Frame = 0
BLAST of CsGy3G044840 vs. TAIR 10
Match: AT1G80750.1 (Ribosomal protein L30/L7 family protein ) HSP 1 Score: 283.1 bits (723), Expect = 2.2e-76 Identity = 145/247 (58.70%), Postives = 186/247 (75.30%), Query Frame = 0
BLAST of CsGy3G044840 vs. TAIR 10
Match: AT2G01250.1 (Ribosomal protein L30/L7 family protein ) HSP 1 Score: 250.4 bits (638), Expect = 1.6e-66 Identity = 123/236 (52.12%), Postives = 172/236 (72.88%), Query Frame = 0
BLAST of CsGy3G044840 vs. TAIR 10
Match: AT3G13580.3 (Ribosomal protein L30/L7 family protein ) HSP 1 Score: 246.1 bits (627), Expect = 2.9e-65 Identity = 122/247 (49.39%), Postives = 177/247 (71.66%), Query Frame = 0
BLAST of CsGy3G044840 vs. TAIR 10
Match: AT3G13580.2 (Ribosomal protein L30/L7 family protein ) HSP 1 Score: 246.1 bits (627), Expect = 2.9e-65 Identity = 122/247 (49.39%), Postives = 177/247 (71.66%), Query Frame = 0
BLAST of CsGy3G044840 vs. TAIR 10
Match: AT3G13580.1 (Ribosomal protein L30/L7 family protein ) HSP 1 Score: 246.1 bits (627), Expect = 2.9e-65 Identity = 122/247 (49.39%), Postives = 177/247 (71.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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