CsGy3G026650 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G026650
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RING-type E3 ubiquitin transferase
Location	Gy14Chr3: 27450975 .. 27452877 (-)
RNA-Seq Expression	CsGy3G026650
Synteny	CsGy3G026650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGCATGATTGCTGCGGCACAAACTTTAGGCCTCACAAGTCATGAGTAGGACTTACCAAAAACAAAAAAAGTTCGTTTTGATTTTGAAGCTGTTGTTTTGTAACTCATGAATCCGCTATGTAATAATCAATTTCAACCCTTTTTTGCGTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCCTCAATTTCAAGTCTCTCTACTCACATATCTCGTCCCCACTCATGGAAGACGAGTACAAGCTGAGTCAACACTCCTCCGACTCCGTCTCCATCGAGCTACCTGGAATGGTCATTATCACAGCCATTTTAGTCTTCTTCTTAATCCTTGTTTTTGTTCTTCTTCTCCAACTCTACGCCAAATGGTTATGGTCTCGCATTGAAGATCCCACCCCTCTTCCACTTGAAACTCGCCGCCGTCGCCGCCGCCGATTTGAGTTCTCCGCCGTACATGACCCCAATTCCGCAAGAGGGTTAGACCCCACTGTCCTCCGCTCACTCCCTGTTATCATATTTCACCCCGATGACTTCAAAGATGGGCTGGAATGTGCTGTTTGTCTCTCCGATCTTGTTGAAGGTGAAAAGGCAAAGCTACTTCATGATTGCTTCCATGGCTTCCATAGCGATTGTATCGATATGTGGTTTCAGTCTCATTCCACTTGCCCTCTCTGTCGGAACCCCGTCACCACCGCCGCCGCAGACACCACCGAGTTGCACGATGAAGATTCAACTTCTGGGTTGTCCTCAGAATCTCCAACTTTCCCAACTAATGTATTGATTTGGGGAAATCAAGGGCAGGTCACCTCTGCCGGAGCTCTTCTTGAAGTGGAAGAGAGTTCTCCTCAAAACCATTTTCCGGCCGCTTCTTCATCGGCATCAACCGCTTACCCAGATGCAGAATTGGTGATTGATGTACAGAATGATGTTCAATTTTCGCCATTAACAACTAACGAAGATGGAAAGTTACCTGTCGTCACTAGATTGAGGTCTTTGAAAAGACTTTTGAGTAGGCAAAGAAGAGTGAATCCTTGTAATTCAAATTCAGCTAATGCTGAATCAGAACAACTGCCATGAGAGGCTGAGAATAATGTTAAGTTTATACAAAACTTGTATAAATTTGTTTGTTTTTCAGTAACGAGAGGGATAGTGTTGTTGAGATCATCTCCGAAATCAATGTTTCTCCAACCAACTCTTCCATTTTGTTAGAAATATGATTATTTTTCAGAAGCTTTATGTATCCTTTAAATCCATTTTGATCTGTTTTAGTATATGATGGAATGAACTTGATTTGTGAAAAGAGGCAAATATGACAACATAATAACCATAACATTTAATAAGCTTTCAAAACCTTCAGACACACAAAACAAACCAACATAGAAATATAAGACAAAGATGAAATGAGAACAATGTAGGCCTATGTAACAAGATAAATTGGACCATAATTTTGATTGGTATTAGGGGCACTAAGCTGGTGAAGACACATATATGGGATCTCCGTCTCTGTTCTCATAGTAGGATTGAAGAGACTAGCAATCGGTCCAGACATCGGACGACGTCGAGGTCTGCCATCGATGGTCATAGCTTCGCTGTAAATTGGACCAGAAACATAAACACGTCTTTTATTAGGTGTGTGAGGATTTTTCTCTGGTTTAGGCAGAGATTTGCTCTTTTTGTCACTTTTCAACCATGAGAAGAGTGTATTTTTCCATGATTTCTTGTTCTTTTTCTCTTGTGCCAACCATTTCCTTTCTGTTTCTTCTTCTATGGAGGCTGCCTTGAAATGTTGTTGTGTTGCATGATGTTTTGCTTCTTCCAAGAACTGGTGAATTCACAAACAAATTTCATTAATACATGAAGAAGAATATCAGATGAAACTACATTAACGACTCACCTTGGAAAAGTT

mRNA sequence

CCGGCATGATTGCTGCGGCACAAACTTTAGGCCTCACAAGTCATGAGTAGGACTTACCAAAAACAAAAAAAGTTCGTTTTGATTTTGAAGCTGTTGTTTTGTAACTCATGAATCCGCTATGTAATAATCAATTTCAACCCTTTTTTGCGTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCCTCAATTTCAAGTCTCTCTACTCACATATCTCGTCCCCACTCATGGAAGACGAGTACAAGCTGAGTCAACACTCCTCCGACTCCGTCTCCATCGAGCTACCTGGAATGGTCATTATCACAGCCATTTTAGTCTTCTTCTTAATCCTTGTTTTTGTTCTTCTTCTCCAACTCTACGCCAAATGGTTATGGTCTCGCATTGAAGATCCCACCCCTCTTCCACTTGAAACTCGCCGCCGTCGCCGCCGCCGATTTGAGTTCTCCGCCGTACATGACCCCAATTCCGCAAGAGGGTTAGACCCCACTGTCCTCCGCTCACTCCCTGTTATCATATTTCACCCCGATGACTTCAAAGATGGGCTGGAATGTGCTGTTTGTCTCTCCGATCTTGTTGAAGGTGAAAAGGCAAAGCTACTTCATGATTGCTTCCATGGCTTCCATAGCGATTGTATCGATATGTGGTTTCAGTCTCATTCCACTTGCCCTCTCTGTCGGAACCCCGTCACCACCGCCGCCGCAGACACCACCGAGTTGCACGATGAAGATTCAACTTCTGGGTTGTCCTCAGAATCTCCAACTTTCCCAACTAATGTATTGATTTGGGGAAATCAAGGGCAGGTCACCTCTGCCGGAGCTCTTCTTGAAGTGGAAGAGAGTTCTCCTCAAAACCATTTTCCGGCCGCTTCTTCATCGGCATCAACCGCTTACCCAGATGCAGAATTGGTGATTGATGTACAGAATGATGTTCAATTTTCGCCATTAACAACTAACGAAGATGGAAAGTTACCTGTCGTCACTAGATTGAGGTCTTTGAAAAGACTTTTGAGTAGGCAAAGAAGAGTGAATCCTTGTAATTCAAATTCAGCTAATGCTGAATCAGAACAACTGCCATGAGAGGCTGAGAATAATGTTAAGTTTATACAAAACTTGTATAAATTTGTTTGTTTTTCAGTAACGAGAGGGATAGTGTTGTTGAGATCATCTCCGAAATCAATGTTTCTCCAACCAACTCTTCCATTTTGTTAGAAATATGATTATTTTTCAGAAGCTTTATGTATCCTTTAAATCCATTTTGATCTGTTTTAGTATATGATGGAATGAACTTGATTTGTGAAAAGAGGCAAATATGACAACATAATAACCATAACATTTAATAAGCTTTCAAAACCTTCAGACACACAAAACAAACCAACATAGAAATATAAGACAAAGATGAAATGAGAACAATGTAGGCCTATGTAACAAGATAAATTGGACCATAATTTTGATTGGTATTAGGGGCACTAAGCTGGTGAAGACACATATATGGGATCTCCGTCTCTGTTCTCATAGTAGGATTGAAGAGACTAGCAATCGGTCCAGACATCGGACGACGTCGAGGTCTGCCATCGATGGTCATAGCTTCGCTGTAAATTGGACCAGAAACATAAACACGTCTTTTATTAGGTGTGTGAGGATTTTTCTCTGGTTTAGGCAGAGATTTGCTCTTTTTGTCACTTTTCAACCATGAGAAGAGTGTATTTTTCCATGATTTCTTGTTCTTTTTCTCTTGTGCCAACCATTTCCTTTCTGTTTCTTCTTCTATGGAGGCTGCCTTGAAATGTTGTTGTGTTGCATGATGTTTTGCTTCTTCCAAGAACTGGTGAATTCACAAACAAATTTCATTAATACATGAAGAAGAATATCAGATGAAACTACATTAACGACTCACCTTGGAAAAGTT

Coding sequence (CDS)

ATGGAAGACGAGTACAAGCTGAGTCAACACTCCTCCGACTCCGTCTCCATCGAGCTACCTGGAATGGTCATTATCACAGCCATTTTAGTCTTCTTCTTAATCCTTGTTTTTGTTCTTCTTCTCCAACTCTACGCCAAATGGTTATGGTCTCGCATTGAAGATCCCACCCCTCTTCCACTTGAAACTCGCCGCCGTCGCCGCCGCCGATTTGAGTTCTCCGCCGTACATGACCCCAATTCCGCAAGAGGGTTAGACCCCACTGTCCTCCGCTCACTCCCTGTTATCATATTTCACCCCGATGACTTCAAAGATGGGCTGGAATGTGCTGTTTGTCTCTCCGATCTTGTTGAAGGTGAAAAGGCAAAGCTACTTCATGATTGCTTCCATGGCTTCCATAGCGATTGTATCGATATGTGGTTTCAGTCTCATTCCACTTGCCCTCTCTGTCGGAACCCCGTCACCACCGCCGCCGCAGACACCACCGAGTTGCACGATGAAGATTCAACTTCTGGGTTGTCCTCAGAATCTCCAACTTTCCCAACTAATGTATTGATTTGGGGAAATCAAGGGCAGGTCACCTCTGCCGGAGCTCTTCTTGAAGTGGAAGAGAGTTCTCCTCAAAACCATTTTCCGGCCGCTTCTTCATCGGCATCAACCGCTTACCCAGATGCAGAATTGGTGATTGATGTACAGAATGATGTTCAATTTTCGCCATTAACAACTAACGAAGATGGAAAGTTACCTGTCGTCACTAGATTGAGGTCTTTGAAAAGACTTTTGAGTAGGCAAAGAAGAGTGAATCCTTGTAATTCAAATTCAGCTAATGCTGAATCAGAACAACTGCCATGA

Protein sequence

MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPLETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEKAKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFPTNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLTTNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP*

Homology

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BLAST of CsGy3G026650 vs. ExPASy Swiss-Prot
Match: Q9XF63 (RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.1e-48
Identity = 126/313 (40.26%), Postives = 169/313 (53.99%), Query Frame = 0


Query: 8   SQHSS---DSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRI------------ 67
           S HSS   D  + E+   +I+TAI+V F+ ++FVL+L LYAK  W RI            
Sbjct: 6   STHSSMFGDLSTEEVTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQQQQ 65

Query: 68  -----EDPTPL-PLETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGL 127
                ED + + P    RR+RRRF F    D  S  GL    L SLP++ F  D  KDGL
Sbjct: 66  EQEQEEDQSSIAPPVVTRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQDSCKDGL 125

Query: 128 ECAVCLSDLVEGEKAKLLHDCFHGFHSDCIDMWFQSHSTCPLCRN--------------- 187
           EC++CLS+LV+G+KA+LL  C H FH +CIDMWFQSHSTCP+CRN               
Sbjct: 126 ECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSKRVEQ 185

Query: 188 -PVTTAAADTTELHDEDSTSGLSSESPTFPTNVLIWGNQGQVTSAGALLEVEESSPQNHF 247
            P     A TT  ++ D+ S LS+ SP FPTNVL+WG Q QV++    +  +E     + 
Sbjct: 186 VPDNAENAGTTN-NNHDALSQLSTSSPEFPTNVLVWGRQDQVSTGNTNVGTQEDGAAGN- 245

Query: 248 PAASSSASTAYPDAELVIDVQNDVQFSP-----LTTNEDGKLPVVTRLRSLKRLLSRQRR 279
             AS S      D        ++V  S      +   E+ K P+ TRLRSL+R LSR +R
Sbjct: 246 -GASQSQEAVVLDISDSSSRNHNVSSSSSSMRFIVEEEEAKSPMTTRLRSLRRFLSRDKR 305

[Close]

BLAST of CsGy3G026650 vs. ExPASy Swiss-Prot
Match: P0C035 (RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.4e-46
Identity = 121/291 (41.58%), Postives = 163/291 (56.01%), Query Frame = 0


Query: 18  ELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPLET----------RRRRR 77
           E  G V++ +I+  F  ++F+LLL LYA+  W R+E    L L            R  RR
Sbjct: 19  ETMGKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRR 78

Query: 78  RRFEFS-AVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEKAKLLHD 137
           RRF F+ +  DP    GLD  +L+S+ V++F   DFKDGLECAVCLSDLV+G+KA++L  
Sbjct: 79  RRFVFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPR 138

Query: 138 CFHGFHSDCIDMWFQSHSTCPLCRNPVTTA------------------AADTTELH---- 197
           C HGFH DCIDMWFQSHSTCPLCRN V +                   +  +T  H    
Sbjct: 139 CNHGFHVDCIDMWFQSHSTCPLCRNTVGSVEDTTHGGSEGLPQNQNFESGHSTNQHNPSQ 198

Query: 198 DEDSTSGLSSESPTFPTNVLIWGNQGQVTSAGALLEVEESSPQNHFPAA------SSSAS 257
           D+      S+E  +FPTNVL+WG+Q QV SAG  L V E SP  +F A+       SS++
Sbjct: 199 DQSFVHEFSTEPLSFPTNVLVWGDQNQVRSAG--LVVTEESPSGNFAASYNDHQQESSST 258

Query: 258 TAYPDAELVIDV--QNDVQFSPLTTNEDGKLPVVTRLRSLKRLLSRQRRVN 268
            +     +V+D+   +    S     E+ K P+ TRLR LK +LSR++  N
Sbjct: 259 RSQEVTAVVVDIPDNSSENLSERIDEEEPKSPMFTRLRLLKNVLSREKTNN 307

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BLAST of CsGy3G026650 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 4.6e-27
Identity = 89/271 (32.84%), Postives = 131/271 (48.34%), Query Frame = 0


Query: 12  SDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPLETRRRRRRRFE 71
           S S +  + G ++++AI++ F +++ ++ L LYA+W   R        L  R R RR   
Sbjct: 19  SGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR---RRHLRRRSRNRRATM 78

Query: 72  FSAVHDPNSA-------RGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEKAKLL 131
                DP++A       RGLDP V++SLPV  F  +  KD +ECAVCLS+  E E  ++L
Sbjct: 79  VFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVL 138

Query: 132 HDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFPTNVL 191
            +C H FH DCIDMWF SHSTCPLCR+ V             +S +G+ S +      V+
Sbjct: 139 PNCQHTFHVDCIDMWFHSHSTCPLCRSLV-------------ESLAGIESTAAAREREVV 198

Query: 192 IWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPD-----AELVIDVQNDVQFSPL 251
           I  +   V     ++E   SS     P  S S+     D     A + +  +   +F   
Sbjct: 199 IAVDSDPV----LVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDE 258

Query: 252 TTNEDGKL-----PVVTRLRSLKRLLSRQRR 266
            T  D          ++R+ S  R+LSR RR
Sbjct: 259 LTRRDSPASQSFRSPMSRMLSFTRMLSRDRR 269

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BLAST of CsGy3G026650 vs. ExPASy Swiss-Prot
Match: Q9LRB7 (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.1e-20
Identity = 87/259 (33.59%), Postives = 119/259 (45.95%), Query Frame = 0


Query: 21  GMVIITAILVFF--LILVFVLLLQLYAKWLWSRIEDPTPLPLETR-RRRRRRFEFSAVHD 80
           G+  + A+L+ F  L L FV LLQ Y      R    T      R RR R R    +  D
Sbjct: 37  GIATVAAVLIVFAALTLAFV-LLQCYCD---ERRRAVTTTSTSGRGRRPRPRRRSGSGGD 96

Query: 81  PNSARGLDPTVLRSLPVIIF-----------HPDDFKDGLECAVCLSDLVEGEKAKLLHD 140
             +  G+DP VLRSLPV ++             ++  DG+ECAVCL++L +GE+A+ L  
Sbjct: 97  GGTGGGVDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPR 156

Query: 141 CFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFPTNVLIW 200
           C HGFH++C+DMW  SHSTCPLCR  V         +  E      +S + + P +VL+ 
Sbjct: 157 CGHGFHAECVDMWLGSHSTCPLCRLTVVVPPPPLPPVPPEPP----ASYTVSLPASVLLG 216

Query: 201 GNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLTTNEDGK 260
            +      AGA+    E           S+AST   DA                      
Sbjct: 217 LSD---HGAGAVTMTAEGRSTLVIEIPESAASTTPRDAAA------------------RS 266

Query: 261 LPVVTRLRSLKRLLSRQRR 266
            P + RLRSL+RL S  R+
Sbjct: 277 SPSLARLRSLRRLWSFGRQ 266

[Close]

BLAST of CsGy3G026650 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-19
Identity = 55/165 (33.33%), Postives = 82/165 (49.70%), Query Frame = 0


Query: 23  VIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPLETRRRRRRR------------- 82
           V++ A++   L+++FVLLL  YA++ WS            RRRRRR              
Sbjct: 29  VLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRRRRNRRRTVTTTRIIPS 88

Query: 83  ---------FEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDG--LECAVCLSDLVEG 142
                        A       +GLD +V+ S+P+ ++  ++ ++    EC +CL     G
Sbjct: 89  LPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAG 148

Query: 143 EKAKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTEL 164
           +  + L +C HGFH +CIDMW  SHSTCPLCR+PV  A +D   L
Sbjct: 149 DFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEENL 193

[Close]

BLAST of CsGy3G026650 vs. NCBI nr
Match: XP_004144452.1 (RING-H2 finger protein ATL3 [Cucumis sativus] >KGN58480.1 hypothetical protein Csa_001810 [Cucumis sativus])

HSP 1 Score: 558 bits (1438), Expect = 2.31e-200
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60
           MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL
Sbjct: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60

Query: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120
           ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK
Sbjct: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180

Query: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT 240
           TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT
Sbjct: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT 240

Query: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP 282
           TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP
Sbjct: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP 282

[Close]

BLAST of CsGy3G026650 vs. NCBI nr
Match: XP_008460362.1 (PREDICTED: RING-H2 finger protein ATL3-like [Cucumis melo] >KAA0053601.1 RING-H2 finger protein ATL3-like [Cucumis melo var. makuwa] >TYK19188.1 RING-H2 finger protein ATL3-like [Cucumis melo var. makuwa])

HSP 1 Score: 540 bits (1391), Expect = 3.38e-193
Identity = 271/282 (96.10%), Postives = 274/282 (97.16%), Query Frame = 0


Query: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60
           MEDEYKLSQHS DSV+IELPGMVIITAILVFFL+LVFVLLLQLYAKWLWSRIEDPTPLPL
Sbjct: 1   MEDEYKLSQHSGDSVTIELPGMVIITAILVFFLVLVFVLLLQLYAKWLWSRIEDPTPLPL 60

Query: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120
           ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK
Sbjct: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTA ADT ELHDEDSTSGLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAVADTAELHDEDSTSGLSSESPTFP 180

Query: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT 240
           TNVLIWGNQGQVTSAGALLEVEE   QNHFPAASSSAST YPDAELVIDVQN+VQF PLT
Sbjct: 181 TNVLIWGNQGQVTSAGALLEVEEGPSQNHFPAASSSASTTYPDAELVIDVQNEVQFPPLT 240

Query: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP 282
           TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP
Sbjct: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP 282

[Close]

BLAST of CsGy3G026650 vs. NCBI nr
Match: XP_038895336.1 (RING-H2 finger protein ATL3-like [Benincasa hispida])

HSP 1 Score: 496 bits (1277), Expect = 7.99e-176
Identity = 248/282 (87.94%), Postives = 263/282 (93.26%), Query Frame = 0


Query: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60
           M DEY+++QHS DSV+IELPGMVI+TAILVFFL+LVFVLLLQLYA+WLWSRIEDPTPLPL
Sbjct: 1   MGDEYRMTQHSGDSVNIELPGMVIVTAILVFFLVLVFVLLLQLYARWLWSRIEDPTPLPL 60

Query: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120
           ETRRRRRRRFEFSAV DPNS RGLDPTVLRSLPV+IFHPD+FKDGLECAVCLS+LVEGEK
Sbjct: 61  ETRRRRRRRFEFSAVQDPNSGRGLDPTVLRSLPVLIFHPDNFKDGLECAVCLSELVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVT AAADT EL  EDSTSGLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTAAAADTGELQGEDSTSGLSSESPTFP 180

Query: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT 240
           TNVLIWGNQ QVTSAGA LEVEE S QN FPAASSSAS +Y DAELVIDVQ+D+QF P+ 
Sbjct: 181 TNVLIWGNQAQVTSAGACLEVEEGSSQNPFPAASSSASASYSDAELVIDVQSDLQFLPIA 240

Query: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP 282
           TNEDGKLPVVTRLRSLKRLLSRQRRVNPCN NSANAE EQ+P
Sbjct: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNPNSANAEIEQVP 282

[Close]

BLAST of CsGy3G026650 vs. NCBI nr
Match: XP_023527880.1 (RING-H2 finger protein ATL3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 485 bits (1249), Expect = 1.42e-171
Identity = 244/281 (86.83%), Postives = 260/281 (92.53%), Query Frame = 0


Query: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60
           MED+YKLSQHS DSV+IELPGMVI+TAILVF L+LVFVLLLQLYA+WLWSRIEDP+PLP+
Sbjct: 1   MEDDYKLSQHSGDSVTIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPSPLPV 60

Query: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120
           ETRRRRRRRFEFSA+HDPNS RGLDP +LRSLPV+IFHPDDFKDGLECAVCLSDLVEGEK
Sbjct: 61  ETRRRRRRRFEFSAIHDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVT AAAD+ EL DEDS +GLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVT-AAADSGELQDEDSATGLSSESPTFP 180

Query: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT 240
           TNVLIWGNQ QVTSAGA LEVEESS QN FPA SSSAS++ P AELVIDVQND+QF PL 
Sbjct: 181 TNVLIWGNQEQVTSAGACLEVEESSSQNPFPATSSSASSSNPAAELVIDVQNDLQFPPLA 240

Query: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQL 281
            NEDGKLPVVTRLRSLKRLLSRQRRVNPC+ NSAN E EQL
Sbjct: 241 PNEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSANVEMEQL 280

[Close]

BLAST of CsGy3G026650 vs. NCBI nr
Match: XP_022955893.1 (RING-H2 finger protein ATL3-like [Cucurbita moschata])

HSP 1 Score: 481 bits (1237), Expect = 9.57e-170
Identity = 242/281 (86.12%), Postives = 259/281 (92.17%), Query Frame = 0


Query: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60
           MED+YKLSQHS DSV+IELPGMVI+TAILVF L+LVFVLLLQLYA+WLWSRIEDP+PLP+
Sbjct: 1   MEDDYKLSQHSGDSVTIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPSPLPV 60

Query: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120
           ETRRRRRRRFEFSA+ DPNS RGLDP +LRSLPV+IFHPDDFKDGLECAVCLSDLVEGEK
Sbjct: 61  ETRRRRRRRFEFSAIQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180
           AKLLHDCFHGFHSDCIDMWF+SHSTCPLCRNPVT AAAD+ EL DEDS SGLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFESHSTCPLCRNPVT-AAADSGELQDEDSASGLSSESPTFP 180

Query: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT 240
           TNVLIWGNQ QVTSAGA LEV+E S QN FPAA SSAS++ P AELVIDVQND+QF PLT
Sbjct: 181 TNVLIWGNQEQVTSAGACLEVKEGSSQNPFPAACSSASSSNPAAELVIDVQNDLQFPPLT 240

Query: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQL 281
            NEDGKLPVVTRLRSLKRLLSRQRRVNPC+ NSAN E EQL
Sbjct: 241 PNEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSANVEMEQL 280

[Close]

BLAST of CsGy3G026650 vs. ExPASy TrEMBL
Match: A0A0A0L962 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G646670 PE=3 SV=1)

HSP 1 Score: 558 bits (1438), Expect = 1.12e-200
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60
           MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL
Sbjct: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60

Query: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120
           ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK
Sbjct: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180

Query: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT 240
           TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT
Sbjct: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT 240

Query: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP 282
           TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP
Sbjct: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP 282

[Close]

BLAST of CsGy3G026650 vs. ExPASy TrEMBL
Match: A0A5A7UJD5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G001230 PE=3 SV=1)

HSP 1 Score: 540 bits (1391), Expect = 1.63e-193
Identity = 271/282 (96.10%), Postives = 274/282 (97.16%), Query Frame = 0


Query: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60
           MEDEYKLSQHS DSV+IELPGMVIITAILVFFL+LVFVLLLQLYAKWLWSRIEDPTPLPL
Sbjct: 1   MEDEYKLSQHSGDSVTIELPGMVIITAILVFFLVLVFVLLLQLYAKWLWSRIEDPTPLPL 60

Query: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120
           ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK
Sbjct: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTA ADT ELHDEDSTSGLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAVADTAELHDEDSTSGLSSESPTFP 180

Query: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT 240
           TNVLIWGNQGQVTSAGALLEVEE   QNHFPAASSSAST YPDAELVIDVQN+VQF PLT
Sbjct: 181 TNVLIWGNQGQVTSAGALLEVEEGPSQNHFPAASSSASTTYPDAELVIDVQNEVQFPPLT 240

Query: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP 282
           TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP
Sbjct: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP 282

[Close]

BLAST of CsGy3G026650 vs. ExPASy TrEMBL
Match: A0A1S3CCE4 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499208 PE=3 SV=1)

HSP 1 Score: 540 bits (1391), Expect = 1.63e-193
Identity = 271/282 (96.10%), Postives = 274/282 (97.16%), Query Frame = 0


Query: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60
           MEDEYKLSQHS DSV+IELPGMVIITAILVFFL+LVFVLLLQLYAKWLWSRIEDPTPLPL
Sbjct: 1   MEDEYKLSQHSGDSVTIELPGMVIITAILVFFLVLVFVLLLQLYAKWLWSRIEDPTPLPL 60

Query: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120
           ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK
Sbjct: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTA ADT ELHDEDSTSGLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAVADTAELHDEDSTSGLSSESPTFP 180

Query: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT 240
           TNVLIWGNQGQVTSAGALLEVEE   QNHFPAASSSAST YPDAELVIDVQN+VQF PLT
Sbjct: 181 TNVLIWGNQGQVTSAGALLEVEEGPSQNHFPAASSSASTTYPDAELVIDVQNEVQFPPLT 240

Query: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP 282
           TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP
Sbjct: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQLP 282

[Close]

BLAST of CsGy3G026650 vs. ExPASy TrEMBL
Match: A0A6J1GV98 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111457742 PE=3 SV=1)

HSP 1 Score: 481 bits (1237), Expect = 4.63e-170
Identity = 242/281 (86.12%), Postives = 259/281 (92.17%), Query Frame = 0


Query: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60
           MED+YKLSQHS DSV+IELPGMVI+TAILVF L+LVFVLLLQLYA+WLWSRIEDP+PLP+
Sbjct: 1   MEDDYKLSQHSGDSVTIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPSPLPV 60

Query: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120
           ETRRRRRRRFEFSA+ DPNS RGLDP +LRSLPV+IFHPDDFKDGLECAVCLSDLVEGEK
Sbjct: 61  ETRRRRRRRFEFSAIQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180
           AKLLHDCFHGFHSDCIDMWF+SHSTCPLCRNPVT AAAD+ EL DEDS SGLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFESHSTCPLCRNPVT-AAADSGELQDEDSASGLSSESPTFP 180

Query: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT 240
           TNVLIWGNQ QVTSAGA LEV+E S QN FPAA SSAS++ P AELVIDVQND+QF PLT
Sbjct: 181 TNVLIWGNQEQVTSAGACLEVKEGSSQNPFPAACSSASSSNPAAELVIDVQNDLQFPPLT 240

Query: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQL 281
            NEDGKLPVVTRLRSLKRLLSRQRRVNPC+ NSAN E EQL
Sbjct: 241 PNEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSANVEMEQL 280

[Close]

BLAST of CsGy3G026650 vs. ExPASy TrEMBL
Match: A0A6J1IRZ5 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111479984 PE=3 SV=1)

HSP 1 Score: 479 bits (1233), Expect = 1.89e-169
Identity = 243/281 (86.48%), Postives = 256/281 (91.10%), Query Frame = 0


Query: 1   MEDEYKLSQHSSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPL 60
           MED+YKLSQHS DSVSIELPGMVI+TAILVF L+LVFVLLLQLYA+WLWSRIEDPTPLP+
Sbjct: 1   MEDDYKLSQHSGDSVSIELPGMVIVTAILVFLLVLVFVLLLQLYARWLWSRIEDPTPLPV 60

Query: 61  ETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEK 120
           ETRRRRRRRFEFSAV DPNS RGLDP +LRSLPV+IFHPDDFKDGLECAVCLSDLVEGEK
Sbjct: 61  ETRRRRRRRFEFSAVQDPNSGRGLDPKILRSLPVLIFHPDDFKDGLECAVCLSDLVEGEK 120

Query: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFP 180
           AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVT AAAD+ EL DEDS +GLSSESPTFP
Sbjct: 121 AKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVT-AAADSGELQDEDSATGLSSESPTFP 180

Query: 181 TNVLIWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPDAELVIDVQNDVQFSPLT 240
           TNVLIWGNQ QVTSAGA LEVEE S QN FPA SSSAS++   AELVIDVQND+QF PL 
Sbjct: 181 TNVLIWGNQEQVTSAGACLEVEEGSSQNPFPATSSSASSSNQAAELVIDVQNDLQFPPLA 240

Query: 241 TNEDGKLPVVTRLRSLKRLLSRQRRVNPCNSNSANAESEQL 281
            NEDGKLPVVTRLRSLKRLLSRQRRVNPC+ NS N E EQL
Sbjct: 241 PNEDGKLPVVTRLRSLKRLLSRQRRVNPCDPNSGNVEMEQL 280

[Close]

BLAST of CsGy3G026650 vs. TAIR 10
Match: AT1G72310.1 (RING/U-box superfamily protein )

HSP 1 Score: 192.6 bits (488), Expect = 4.4e-49
Identity = 126/313 (40.26%), Postives = 169/313 (53.99%), Query Frame = 0


Query: 8   SQHSS---DSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRI------------ 67
           S HSS   D  + E+   +I+TAI+V F+ ++FVL+L LYAK  W RI            
Sbjct: 6   STHSSMFGDLSTEEVTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQQQQ 65

Query: 68  -----EDPTPL-PLETRRRRRRRFEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGL 127
                ED + + P    RR+RRRF F    D  S  GL    L SLP++ F  D  KDGL
Sbjct: 66  EQEQEEDQSSIAPPVVTRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQDSCKDGL 125

Query: 128 ECAVCLSDLVEGEKAKLLHDCFHGFHSDCIDMWFQSHSTCPLCRN--------------- 187
           EC++CLS+LV+G+KA+LL  C H FH +CIDMWFQSHSTCP+CRN               
Sbjct: 126 ECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSKRVEQ 185

Query: 188 -PVTTAAADTTELHDEDSTSGLSSESPTFPTNVLIWGNQGQVTSAGALLEVEESSPQNHF 247
            P     A TT  ++ D+ S LS+ SP FPTNVL+WG Q QV++    +  +E     + 
Sbjct: 186 VPDNAENAGTTN-NNHDALSQLSTSSPEFPTNVLVWGRQDQVSTGNTNVGTQEDGAAGN- 245

Query: 248 PAASSSASTAYPDAELVIDVQNDVQFSP-----LTTNEDGKLPVVTRLRSLKRLLSRQRR 279
             AS S      D        ++V  S      +   E+ K P+ TRLRSL+R LSR +R
Sbjct: 246 -GASQSQEAVVLDISDSSSRNHNVSSSSSSMRFIVEEEEAKSPMTTRLRSLRRFLSRDKR 305

[Close]

BLAST of CsGy3G026650 vs. TAIR 10
Match: AT1G53820.1 (RING/U-box superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 2.4e-47
Identity = 121/291 (41.58%), Postives = 163/291 (56.01%), Query Frame = 0


Query: 18  ELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPLET----------RRRRR 77
           E  G V++ +I+  F  ++F+LLL LYA+  W R+E    L L            R  RR
Sbjct: 19  ETMGKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRR 78

Query: 78  RRFEFS-AVHDPNSARGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEKAKLLHD 137
           RRF F+ +  DP    GLD  +L+S+ V++F   DFKDGLECAVCLSDLV+G+KA++L  
Sbjct: 79  RRFVFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPR 138

Query: 138 CFHGFHSDCIDMWFQSHSTCPLCRNPVTTA------------------AADTTELH---- 197
           C HGFH DCIDMWFQSHSTCPLCRN V +                   +  +T  H    
Sbjct: 139 CNHGFHVDCIDMWFQSHSTCPLCRNTVGSVEDTTHGGSEGLPQNQNFESGHSTNQHNPSQ 198

Query: 198 DEDSTSGLSSESPTFPTNVLIWGNQGQVTSAGALLEVEESSPQNHFPAA------SSSAS 257
           D+      S+E  +FPTNVL+WG+Q QV SAG  L V E SP  +F A+       SS++
Sbjct: 199 DQSFVHEFSTEPLSFPTNVLVWGDQNQVRSAG--LVVTEESPSGNFAASYNDHQQESSST 258

Query: 258 TAYPDAELVIDV--QNDVQFSPLTTNEDGKLPVVTRLRSLKRLLSRQRRVN 268
            +     +V+D+   +    S     E+ K P+ TRLR LK +LSR++  N
Sbjct: 259 RSQEVTAVVVDIPDNSSENLSERIDEEEPKSPMFTRLRLLKNVLSREKTNN 307

[Close]

BLAST of CsGy3G026650 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 123.2 bits (308), Expect = 3.2e-28
Identity = 89/271 (32.84%), Postives = 131/271 (48.34%), Query Frame = 0


Query: 12  SDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPLETRRRRRRRFE 71
           S S +  + G ++++AI++ F +++ ++ L LYA+W   R        L  R R RR   
Sbjct: 19  SGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR---RRHLRRRSRNRRATM 78

Query: 72  FSAVHDPNSA-------RGLDPTVLRSLPVIIFHPDDFKDGLECAVCLSDLVEGEKAKLL 131
                DP++A       RGLDP V++SLPV  F  +  KD +ECAVCLS+  E E  ++L
Sbjct: 79  VFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVL 138

Query: 132 HDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESPTFPTNVL 191
            +C H FH DCIDMWF SHSTCPLCR+ V             +S +G+ S +      V+
Sbjct: 139 PNCQHTFHVDCIDMWFHSHSTCPLCRSLV-------------ESLAGIESTAAAREREVV 198

Query: 192 IWGNQGQVTSAGALLEVEESSPQNHFPAASSSASTAYPD-----AELVIDVQNDVQFSPL 251
           I  +   V     ++E   SS     P  S S+     D     A + +  +   +F   
Sbjct: 199 IAVDSDPV----LVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDE 258

Query: 252 TTNEDGKL-----PVVTRLRSLKRLLSRQRR 266
            T  D          ++R+ S  R+LSR RR
Sbjct: 259 LTRRDSPASQSFRSPMSRMLSFTRMLSRDRR 269

[Close]

BLAST of CsGy3G026650 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 98.6 bits (244), Expect = 8.6e-21
Identity = 55/165 (33.33%), Postives = 82/165 (49.70%), Query Frame = 0


Query: 23  VIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPLETRRRRRRR------------- 82
           V++ A++   L+++FVLLL  YA++ WS            RRRRRR              
Sbjct: 29  VLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRRRRNRRRTVTTTRIIPS 88

Query: 83  ---------FEFSAVHDPNSARGLDPTVLRSLPVIIFHPDDFKDG--LECAVCLSDLVEG 142
                        A       +GLD +V+ S+P+ ++  ++ ++    EC +CL     G
Sbjct: 89  LPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAG 148

Query: 143 EKAKLLHDCFHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTEL 164
           +  + L +C HGFH +CIDMW  SHSTCPLCR+PV  A +D   L
Sbjct: 149 DFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEENL 193

[Close]

BLAST of CsGy3G026650 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 3.2e-20
Identity = 61/175 (34.86%), Postives = 89/175 (50.86%), Query Frame = 0


Query: 11  SSDSVSIELPGMVIITAILVFFLILVFVLLLQLYAKWLWSRIEDPTPLPLETRRRRRRRF 70
           S  S    L G +++++++V F+ ++ +L    YA+WL+ R           R RRR R 
Sbjct: 16  SHTSSGYALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRR--------HNRRIRRRIRS 75

Query: 71  EFSAVHDPNSARGLDPTVLRSLPVIIF---HPDDFKDGLECAVCLSDLVEGEKAKLLHDC 130
               +      + LD  VL  +P+ ++   +P   ++  EC+VCLS+  E ++ +LL  C
Sbjct: 76  HLRTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKC 135

Query: 131 FHGFHSDCIDMWFQSHSTCPLCRNPVTTAAADTTELHDEDSTSGLSSESP-TFPT 182
            H FH DCID WF+S STCPLCR PV               T   SS SP TFPT
Sbjct: 136 GHSFHVDCIDTWFRSRSTCPLCRAPVQPP-------FQVIETGSSSSSSPLTFPT 175

The following BLAST results are available for this feature:

BLAST of CsGy3G026650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF63	6.1e-48	40.26	RING-H2 finger protein ATL3 OS=Arabidopsis thaliana OX=3702 GN=ATL3 PE=2 SV=1	[more]
P0C035	3.4e-46	41.58	RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1	[more]
Q8L9T5	4.6e-27	32.84	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9LRB7	7.1e-20	33.59	E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5....	[more]
Q9LUZ9	1.2e-19	33.33	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]

BLAST of CsGy3G026650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144452.1	2.31e-200	100.00	RING-H2 finger protein ATL3 [Cucumis sativus] >KGN58480.1 hypothetical protein C...	[more]
XP_008460362.1	3.38e-193	96.10	PREDICTED: RING-H2 finger protein ATL3-like [Cucumis melo] >KAA0053601.1 RING-H2...	[more]
XP_038895336.1	7.99e-176	87.94	RING-H2 finger protein ATL3-like [Benincasa hispida]	[more]
XP_023527880.1	1.42e-171	86.83	RING-H2 finger protein ATL3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022955893.1	9.57e-170	86.12	RING-H2 finger protein ATL3-like [Cucurbita moschata]	[more]

BLAST of CsGy3G026650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L962	1.12e-200	100.00	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G646670 PE...	[more]
A0A5A7UJD5	1.63e-193	96.10	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CCE4	1.63e-193	96.10	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499208 PE=3 ...	[more]
A0A6J1GV98	4.63e-170	86.12	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111457742...	[more]
A0A6J1IRZ5	1.89e-169	86.48	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111479984 P...	[more]

BLAST of CsGy3G026650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72310.1	4.4e-49	40.26	RING/U-box superfamily protein	[more]
AT1G53820.1	2.4e-47	41.58	RING/U-box superfamily protein	[more]
AT3G16720.1	3.2e-28	32.84	TOXICOS EN LEVADURA 2	[more]
AT5G58580.1	8.6e-21	33.33	TOXICOS EN LEVADURA 63	[more]
AT2G47560.1	3.2e-20	34.86	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 108..149 e-value: 6.3E-6 score: 35.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 107..150 e-value: 6.2E-12 score: 45.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 108..150 score: 12.076194
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 71..156 e-value: 1.8E-18 score: 68.0
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 3..276
None	No IPR available	PANTHER	PTHR45676:SF132	RING-H2 FINGER PROTEIN ATL3	coord: 3..276
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 107..150 e-value: 3.2607E-17 score: 71.5723
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 88..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G026650.1	CsGy3G026650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane