CsGy3G025190 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G025190
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 25596775 .. 25598575 (-)
RNA-Seq ExpressionCsGy3G025190
SyntenyCsGy3G025190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAACATGTTGATGTCTCTAAATTTTGTCGATAGATGCAATATACACCAACGAACTGTTTTACTGTCGATAATAAGTGAAATCACCGACGGCAAAAATTATAACGTCGGCATAGATATATTTTTACGGATGACATATTTTTGTACCATCGGCATATATAGACATATGCCAACGGTTTATTATTACCGTCTGCTTCAGTGGACCAATGCCGATGGAATTGAATGTACCGTCGGCAGTTGTTTTAAAACAAAAATGCCCCAGTTTATTTTTTCCCCAAATCTCTTCTTCCTCCCAACATGTCGCCGCACCTTCCCTTCCCCTTCACGGTTTTTTCTCACTTTTCTCCCTCCCACACATGTCGACCACCCCTTTCCTTCCTCTTCATCATTTTTCCTTATCCTTCTCCCTCCCACACACGAACGGCTGTCGGCCCCTACTTTTTCTTGCCACGCGAACGGACGACCGATGCCCTTCATTTTTGTAAACACATCTGAACGGAAACATCGAGAGTGTTTAGCGATGAGAGAGAGAGACAGAGGAAATCAAATCTTTCCAACCACTGCACTTTATAGGGTTAGGTTTTTATTCTTTATTCCCTCTATTTTCTTTCCGTTATCTTTTCTATGTTCAATGACTACTGTTTTTTTTTTTCAAAATACATATTGGTTGGTCTCTTAGTTTGAATTAGATGTTCATTTCATCCACTGCTCCAAAACATATATTTTGGTTTGTCCAGATACTACATGAGACAGTTTTGAAGAAGAGAAGAATAATGGAGAAGAAAGAGAAAGAAATATTGGTGTATTGCTCGTTGTGGAAGATGAAGATCTGGAAACGAATTACTCCCTTAGATTAACTAATTACAGAGGAAACGAATTACTCAACCCAAGAGAATGGATCTAATATTTCCATTGTTTTGCTCAAAGTAAGTACTAAAGTTTATGTTCAGATGAGCAATACGAGTTCTCGAAAAGGAGAACTCCTAATGCGGCTTATTGGCCCACTCCTTATTCTTTCCTGATTTTGCTTGTGTATGTTTGTTGGCTGTAGCTTTTATAATTGTGTAATTGAAATGTAGCACTTGTTGATTACCTTGTTCTTGTGTTTAATAAATTAAATGACATTGTATAGTTAAAATGAATGTATTATGCTTAGGTTTGGTGGTGGGATTGATTTAACTCCTTCCTACATCTTTAATGAAGACGCCAAGCATTTCCATTTCGTAAAGATTCTATTTTCATGGATTCTTCCTTTGCAAAGCTATACATTTTTGTCTCGTTTGTAGTTGTGCGTTATTATCATTCTTACACATGTCAGTATTTGATAGTCTTACTTATAGGCATTTGTGTTGATCTACTTTGCCACATGACCCTTATTGTTTTTGGTTACCAAAGTTTGAGTCTAAATGTTTGTTGTACTATTGATGTTAGAGTATTAAATTGAGGCTTGGAGGACATTGAAAATTTAAAGGGAGACTTTCACTGGCATTGAAGGTTGCTTATTGCTGGGTTAAGGTAAGTTTCATGGGTTTACCGTAGAATTTTTTCATGGGGTGAAATACCCATTGATATTTGGCTTCAAATTGGTGATATCCACTATGTTTTTTATATTAGTTTGGAGATTCGAGGTGTTTGCGTTCCTGCCCAAGAAGTGAAGGATCCATTTTGGTGATTATTGAGACTTCGAAACCTTTTCGATATAGTTGTTTTAGTGGTGGAAGGTGGATTTTAAAATCATAACTTTTGGGTTATGTGTAGATTGGTTGTTCGTGAAGGGATAAAAGCGAGAAGAATTTAAA

mRNA sequence

ATGACAAACATGTTGATGTCTCTAAATTTTGTCGATAGATGCAATATACACCAACGAACTGTTTTACTGTCGATAATAAGTGAAATCACCGACGGCAAAAATTATAACGTCGGCATAGATATATTTTTACGGATGACATATTTTTGTACCATCGGCATATATAGACATATGCCAACGGTTTATTATTACCGTCTGCTTCAGTGGACCAATGCCGATGGAATTGAATGTACCGTCGGCAGTTGTTTTAAAACAAAAATGCCCCAGTTTATTTTTTCCCCAAATCTCTTCTTCCTCCCAACATGTCGCCGCACCTTCCCTTCCCCTTCACGGTTTTTTCTCACTTTTCTCCCTCCCACACATGTCGACCACCCCTTTCCTTCCTCTTCATCATTTTTCCTTATCCTTCTCCCTCCCACACACGAACGGCTGTCGGCCCCTACTTTTTCTTGCCACGCGAACGGACGACCGATGCCCTTCATTTTTGTAAACACATCTGAACGGAAACATCGAGAGTGTTTAGCGATGAGAGAGAGAGACAGAGGAAATCAAATCTTTCCAACCACTGCACTTTATAGGATACTACATGAGACAGTTTTGAAGAAGAGAAGAATAATGGAGAAGAAAGAGAAAGAAATATTGGTGTATTGCTCGTTGTGGAAGATGAAGATCTGGAAACGAATTACTCCCTTAGATTAACTAATTACAGAGGAAACGAATTACTCAACCCAAGAGAATGGATCTAATATTTCCATTGTTTTGCTCAAAAGTATTAAATTGAGGCTTGGAGGACATTGAAAATTTAAAGGGAGACTTTCACTGGCATTGAAGGTTGCTTATTGCTGGGTTAAGTTTGGAGATTCGAGGTGTTTGCGTTCCTGCCCAAGAAGTGAAGGATCCATTTTGGTGATTATTGAGACTTCGAAACCTTTTCGATATAGTTGTTTTAGTGGTGGAAGGTGGATTTTAAAATCATAACTTTTGGGTTATGTGTAGATTGGTTGTTCGTGAAGGGATAAAAGCGAGAAGAATTTAAA

Coding sequence (CDS)

ATGACAAACATGTTGATGTCTCTAAATTTTGTCGATAGATGCAATATACACCAACGAACTGTTTTACTGTCGATAATAAGTGAAATCACCGACGGCAAAAATTATAACGTCGGCATAGATATATTTTTACGGATGACATATTTTTGTACCATCGGCATATATAGACATATGCCAACGGTTTATTATTACCGTCTGCTTCAGTGGACCAATGCCGATGGAATTGAATGTACCGTCGGCAGTTGTTTTAAAACAAAAATGCCCCAGTTTATTTTTTCCCCAAATCTCTTCTTCCTCCCAACATGTCGCCGCACCTTCCCTTCCCCTTCACGGTTTTTTCTCACTTTTCTCCCTCCCACACATGTCGACCACCCCTTTCCTTCCTCTTCATCATTTTTCCTTATCCTTCTCCCTCCCACACACGAACGGCTGTCGGCCCCTACTTTTTCTTGCCACGCGAACGGACGACCGATGCCCTTCATTTTTGTAAACACATCTGAACGGAAACATCGAGAGTGTTTAGCGATGAGAGAGAGAGACAGAGGAAATCAAATCTTTCCAACCACTGCACTTTATAGGATACTACATGAGACAGTTTTGAAGAAGAGAAGAATAATGGAGAAGAAAGAGAAAGAAATATTGGTGTATTGCTCGTTGTGGAAGATGAAGATCTGGAAACGAATTACTCCCTTAGATTAA

Protein sequence

MTNMLMSLNFVDRCNIHQRTVLLSIISEITDGKNYNVGIDIFLRMTYFCTIGIYRHMPTVYYYRLLQWTNADGIECTVGSCFKTKMPQFIFSPNLFFLPTCRRTFPSPSRFFLTFLPPTHVDHPFPSSSSFFLILLPPTHERLSAPTFSCHANGRPMPFIFVNTSERKHRECLAMRERDRGNQIFPTTALYRILHETVLKKRRIMEKKEKEILVYCSLWKMKIWKRITPLD*
Homology
[Close]
BLAST of CsGy3G025190 vs. NCBI nr
Match: KAE8650837.1 (hypothetical protein Csa_017540 [Cucumis sativus])

HSP 1 Score: 483 bits (1242), Expect = 3.41e-172
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 

Query: 1   MTNMLMSLNFVDRCNIHQRTVLLSIISEITDGKNYNVGIDIFLRMTYFCTIGIYRHMPTV 60
           MTNMLMSLNFVDRCNIHQRTVLLSIISEITDGKNYNVGIDIFLRMTYFCTIGIYRHMPTV
Sbjct: 1   MTNMLMSLNFVDRCNIHQRTVLLSIISEITDGKNYNVGIDIFLRMTYFCTIGIYRHMPTV 60

Query: 61  YYYRLLQWTNADGIECTVGSCFKTKMPQFIFSPNLFFLPTCRRTFPSPSRFFLTFLPPTH 120
           YYYRLLQWTNADGIECTVGSCFKTKMPQFIFSPNLFFLPTCRRTFPSPSRFFLTFLPPTH
Sbjct: 61  YYYRLLQWTNADGIECTVGSCFKTKMPQFIFSPNLFFLPTCRRTFPSPSRFFLTFLPPTH 120

Query: 121 VDHPFPSSSSFFLILLPPTHERLSAPTFSCHANGRPMPFIFVNTSERKHRECLAMRERDR 180
           VDHPFPSSSSFFLILLPPTHERLSAPTFSCHANGRPMPFIFVNTSERKHRECLAMRERDR
Sbjct: 121 VDHPFPSSSSFFLILLPPTHERLSAPTFSCHANGRPMPFIFVNTSERKHRECLAMRERDR 180

Query: 181 GNQIFPTTALYRILHETVLKKRRIMEKKEKEILVYCSLWKMKIWKRITPLD 231
           GNQIFPTTALYRILHETVLKKRRIMEKKEKEILVYCSLWKMKIWKRITPLD
Sbjct: 181 GNQIFPTTALYRILHETVLKKRRIMEKKEKEILVYCSLWKMKIWKRITPLD 231

[Close]
BLAST of CsGy3G025190 vs. ExPASy TrEMBL
Match: A0A0A0LBI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G613410 PE=4 SV=1)

HSP 1 Score: 120 bits (300), Expect = 9.83e-32
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 

Query: 175 MRERDRGNQIFPTTALYRILHETVLKKRRIMEKKEKEILVYCSLWKMKIWKRITPLD 231
           MRERDRGNQIFPTTALYRILHETVLKKRRIMEKKEKEILVYCSLWKMKIWKRITPLD
Sbjct: 1   MRERDRGNQIFPTTALYRILHETVLKKRRIMEKKEKEILVYCSLWKMKIWKRITPLD 57

The following BLAST results are available for this feature:
BLAST of CsGy3G025190 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G025190 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650837.13.41e-172100.00hypothetical protein Csa_017540 [Cucumis sativus][more]
BLAST of CsGy3G025190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBI79.83e-32100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G613410 PE=4 SV=1[more]
BLAST of CsGy3G025190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G025190.2CsGy3G025190.2mRNA