CsGy3G016360 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G016360
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	embryo-specific protein ATS3B-like
Location	Gy14Chr3: 12130875 .. 12133042 (+)
RNA-Seq Expression	CsGy3G016360
Synteny	CsGy3G016360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCTTCCAACTTTACAATTCTGAATTAGTTTTGTTGGTTACAAAAGTTTGGGGATCACTTGCATTTTGCATTTGGTATAAAAACCTTTTTTTTTTTCTTTTTTTCATTTTGATTCTTTAATTTTTTTGACTTCCCAGCAGTGTAAAACCAAACCTACCTACTCCATACTCCAATCACAAATCCCACCATTAATTTCATTCAAACCAACCTTTCCCTATTCCACACTTCAATGGACAAAACATCAAGCTCTCTACACATGGCGACGCCTCTACTTCCTTTCTTCTTCTTCTCCTTCTTCTCCATTTCCGCCGCTCAGTCAACCGCTTCTAAATCCTTATCCATCGCCTATATTCGGGTTCCCTTTATCATTCTACTTCACTTTTTTCTTTCACTCCTCCATTCATGTTCTTATCTCACTCTCTTCTCTTCTTCTTTTCCTATTTTCACGTGAAGGAAGCCGGAGATTGCAATTACAGAGTCAATATAACAACTAGCTGCTCATCCCCTTTCTATATTAGTTCCGAAATCGGCGTTCTCTTTGGGGACGCTCAAGGGAATCAGGTTCGTTTTAATCTTCCCAGATTTTGCTTTTAATTTACTTTGCAATTACTTCATCTCTCGAAGCCTTTAGACTGTAGAGAATAAAATTAAATTAGTTCGTCTTCGTGGTGCTGAAGTTTCATTTAATATGGTTGTTTTGCTAATCTGCTTAGTTAAGGTTTTTTTTTTTTTTTTTTTTTTAAATATTCGAGTTTTGAATTGCAAGGAAAGAACAAATTACTGCTTTAGAACGTGTGGACTTTCCTTTTCCTTTTTTGAAATTAAAGTTTGAGGAAATATATTCATTAAGATTTCTTGAGAGTCCTTCGTCAATTTGGGATTCTCTTACACTTTCTTATGTTTTATTGAATGAATGGAAATTTGATAGTAGAAACTTATAATCTGTTTTCGAAGATGTTTATTGTTACATGTAATCTATTATTTCATGGTTCGCAATCAATATTATATATCTATCACCTAAAAATAGTTTTGAAACTAAAATCAAAATTTTGCTTAAGAACAGCAGGTAGTAGCACTGTTAGTCATTTAATTCAACTTAAAAATTATATTTCGTCATTACAGTAATCTGTCATCTAATCAGAACCTAAGTACAGTTGGTGGCTTTAAACAATTGGAAACATAGATGTTCATTGAATAGATAAAATGAACAAAATACGTACCATCTATGGTTGGTTTTTATTCAATACTATAATGAAAATGAATGATAAGGACAAAAGAACTTTGTATTTATGTAGTAGGTTTGGTTTTGAACCTATTTTCTCTTAATTTTTCTTTTACAGTGGTTTGGATCTTTCCAAAATGGTTGAATTGTAGATATTTCTAGAACTCTCTTATCGAGACATTTAAAGAAGAAAAGAGAAGGGAAAATAAATTTCTGTTTGACCAACCTTTATAGTTTATGTTTCCTGTTCAAATTATGTTTGGATAAGAATGACTAATTTAGAATTTGAAAAGTAGATATATGAGCCAAAGCTAGAAGTTGAAAGCGGGAATGCATTTAGGAAATGCAGAAAAGACATATTTGAACTGATAGGACCATGCATAGACCAGATATGTTTCTTTTATCTTTACAAGAACGGCTCAGACAATTGGATTCCAGAGATTGTAGAAATCTCCAGCCCTGACATTGACACTGTTAAATACACGTACAACTCCTCAATCCCGAATGACACATGGTATGGCTTTGAAGACTGCCAATACTTCCCGTCACCATCACCGCCACCACCACCGCCTCCATCAGTCCCTTCCACAGCCGGCCCTCTGCCAAGGTGGAAATGGATTGCTTCTCTCATCCCTGTGCTTTTCAGCTGCTTTTTGCTGTGAATGTTATTCTCACTCTGTATTATGGCTTTTGGCTTGGTGGACTAGATATATTTTTTGTTTCTATTTTGATCCACCGCTGTGTTTGTATTTGTACTGTATTTTTGAATTTGATGATCACATGAATAGCTGTGTAATTCAACTTTGATATATGTAGAAATGGATTTGATGGAGTTGTGCTATGATTGTTGAATATGGAGGAACATATGTTACTATAATCATGTTCATAGCTTGCGTATCTTAGCAATTGAAGATTCAAGGAGAATTTGTTTAGGGAAAAACGGAA

mRNA sequence

TGTCTTCCAACTTTACAATTCTGAATTAGTTTTGTTGGTTACAAAAGTTTGGGGATCACTTGCATTTTGCATTTGGTATAAAAACCTTTTTTTTTTTCTTTTTTTCATTTTGATTCTTTAATTTTTTTGACTTCCCAGCAGTGTAAAACCAAACCTACCTACTCCATACTCCAATCACAAATCCCACCATTAATTTCATTCAAACCAACCTTTCCCTATTCCACACTTCAATGGACAAAACATCAAGCTCTCTACACATGGCGACGCCTCTACTTCCTTTCTTCTTCTTCTCCTTCTTCTCCATTTCCGCCGCTCAGTCAACCGCTTCTAAATCCTTATCCATCGCCTATATTCGGGAAGCCGGAGATTGCAATTACAGAGTCAATATAACAACTAGCTGCTCATCCCCTTTCTATATTAGTTCCGAAATCGGCGTTCTCTTTGGGGACGCTCAAGGGAATCAGATATATGAGCCAAAGCTAGAAGTTGAAAGCGGGAATGCATTTAGGAAATGCAGAAAAGACATATTTGAACTGATAGGACCATGCATAGACCAGATATGTTTCTTTTATCTTTACAAGAACGGCTCAGACAATTGGATTCCAGAGATTGTAGAAATCTCCAGCCCTGACATTGACACTGTTAAATACACGTACAACTCCTCAATCCCGAATGACACATGGTATGGCTTTGAAGACTGCCAATACTTCCCGTCACCATCACCGCCACCACCACCGCCTCCATCAGTCCCTTCCACAGCCGGCCCTCTGCCAAGGTGGAAATGGATTGCTTCTCTCATCCCTGTGCTTTTCAGCTGCTTTTTGCTGTGAATGTTATTCTCACTCTGTATTATGGCTTTTGGCTTGGTGGACTAGATATATTTTTTGTTTCTATTTTGATCCACCGCTGTGTTTGTATTTGTACTGTATTTTTGAATTTGATGATCACATGAATAGCTGTGTAATTCAACTTTGATATATGTAGAAATGGATTTGATGGAGTTGTGCTATGATTGTTGAATATGGAGGAACATATGTTACTATAATCATGTTCATAGCTTGCGTATCTTAGCAATTGAAGATTCAAGGAGAATTTGTTTAGGGAAAAACGGAA

Coding sequence (CDS)

ATGGACAAAACATCAAGCTCTCTACACATGGCGACGCCTCTACTTCCTTTCTTCTTCTTCTCCTTCTTCTCCATTTCCGCCGCTCAGTCAACCGCTTCTAAATCCTTATCCATCGCCTATATTCGGGAAGCCGGAGATTGCAATTACAGAGTCAATATAACAACTAGCTGCTCATCCCCTTTCTATATTAGTTCCGAAATCGGCGTTCTCTTTGGGGACGCTCAAGGGAATCAGATATATGAGCCAAAGCTAGAAGTTGAAAGCGGGAATGCATTTAGGAAATGCAGAAAAGACATATTTGAACTGATAGGACCATGCATAGACCAGATATGTTTCTTTTATCTTTACAAGAACGGCTCAGACAATTGGATTCCAGAGATTGTAGAAATCTCCAGCCCTGACATTGACACTGTTAAATACACGTACAACTCCTCAATCCCGAATGACACATGGTATGGCTTTGAAGACTGCCAATACTTCCCGTCACCATCACCGCCACCACCACCGCCTCCATCAGTCCCTTCCACAGCCGGCCCTCTGCCAAGGTGGAAATGGATTGCTTCTCTCATCCCTGTGCTTTTCAGCTGCTTTTTGCTGTGA

Protein sequence

MDKTSSSLHMATPLLPFFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSPFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGSDNWIPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGPLPRWKWIASLIPVLFSCFLL*

Homology

[Close]

BLAST of CsGy3G016360 vs. ExPASy Swiss-Prot
Match: Q6NPM5 (Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-27
Identity = 65/158 (41.14%), Postives = 87/158 (55.06%), Query Frame = 0


Query: 10  MATPLLPFFFFSFFSISAAQSTASK---------SLSIAYIREAGD-CNYRVNITTSCSS 69
           MA+  L F   SF  I +     SK         S +++ I++ G+ C Y V I+TSCSS
Sbjct: 1   MASVRLFFTLISFVFIISTSVYESKVLDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSS 60

Query: 70  PFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNG 129
             Y   +I V FGD  GNQIY P+L+  S   F +C  D F++ GPC  QIC+ YLY++G
Sbjct: 61  TRYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSG 120

Query: 130 SDNWIPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDC 158
            D WIP  V+I S     V + YN+ +P   WYGF  C
Sbjct: 121 PDGWIPNTVKIYSHGSKAVTFPYNTYVPESVWYGFNYC 158

[Close]

BLAST of CsGy3G016360 vs. ExPASy Swiss-Prot
Match: Q681K2 (Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.2e-27
Identity = 62/157 (39.49%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 8   LHMATPLLPFFFFSFFSISAAQS-TASKSLSI------AYIREAGDCNYRVNITTSCSSP 67
           L +A PL  F   SF   S+A+S   +K L I        +  A  C+Y V I TSCSS 
Sbjct: 2   LRLAIPLFLFALCSFTLFSSARSFITTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSSV 61

Query: 68  FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS 127
            Y   +I + FGD  GN++Y  +L+  S   F KC  D +++ GPC+  +C+ YL + GS
Sbjct: 62  SYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGS 121

Query: 128 DNWIPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDC 158
           D W PE V+I    I +V + YN  +PN  WYGF  C
Sbjct: 122 DGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVC 158

[Close]

BLAST of CsGy3G016360 vs. ExPASy Swiss-Prot
Match: Q9LYP6 (Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.3e-24
Identity = 68/177 (38.42%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 17  FFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSPFYISSEIGVLFGDAQG 76
           F FF+F  +     T +  LSI  +++ G C Y V + TSC SP     +I ++FGDA G
Sbjct: 10  FLFFAFIFV-----THAFDLSIIQMQQ-GTCPYTVVVMTSCLSPESTRDQISIVFGDADG 69

Query: 77  NQIYEPKLE--VESGNAFRKCRKDIFELIGPCI-DQICFFYLYKNGSDNWIPEIVEISSP 136
           N++Y PKL   V       KC  + F++ G C+ D IC  Y+ +NG D W+PE +EI S 
Sbjct: 70  NKVYAPKLGGLVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSE 129

Query: 137 DIDTVKYTYNSSIPN-DTWYGFEDCQYFPSPSPP--PPP------PPSVPSTAGPLP 182
              +VK+ ++ S+P  +TWYG  +C     PS P  PPP      PP  P+T  P P
Sbjct: 130 GSKSVKFDFSKSVPQLNTWYGHNNCNTTGRPSSPDLPPPHFPPEFPPETPTTPPPPP 180

[Close]

BLAST of CsGy3G016360 vs. NCBI nr
Match: XP_004148153.1 (embryo-specific protein ATS3A [Cucumis sativus])

HSP 1 Score: 407 bits (1047), Expect = 1.58e-143
Identity = 197/199 (98.99%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MDKTSSSLHMATPLLPFFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSP 60
           MDKTSSSLHMATPLLPFFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSP
Sbjct: 1   MDKTSSSLHMATPLLPFFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSP 60

Query: 61  FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS 120
           FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS
Sbjct: 61  FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS 120

Query: 121 DNWIPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGPL 180
           DNWIPE VEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAG L
Sbjct: 121 DNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGSL 180

Query: 181 PRWKWIASLIPVLFSCFLL 199
           PRWKWIASLIPVLFSCFLL
Sbjct: 181 PRWKWIASLIPVLFSCFLL 199

[Close]

BLAST of CsGy3G016360 vs. NCBI nr
Match: XP_008439124.1 (PREDICTED: uncharacterized protein LOC103484014 isoform X1 [Cucumis melo])

HSP 1 Score: 371 bits (952), Expect = 5.98e-129
Identity = 183/205 (89.27%), Postives = 189/205 (92.20%), Query Frame = 0


Query: 1   MDKTSSSLHMATPLLPFFFFSFFSISAAQST------ASKSLSIAYIREAGDCNYRVNIT 60
           M + SSSL+MATPLLPFF FS FSISA+QST      ASKSLSIAYIREAGDCNYRVNIT
Sbjct: 1   MKQKSSSLNMATPLLPFFIFSLFSISASQSTGSLPQPASKSLSIAYIREAGDCNYRVNIT 60

Query: 61  TSCSSPFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFY 120
           TSCSSPFYISSEIGVLFGDA GNQIYEPKLEVESGNAF KCRKDIFELIGPC DQICFFY
Sbjct: 61  TSCSSPFYISSEIGVLFGDAHGNQIYEPKLEVESGNAFGKCRKDIFELIGPCTDQICFFY 120

Query: 121 LYKNGSDNWIPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVP 180
           LYKNGSD+WIPE VEISSPDIDTVKYTYNSSIPNDTWYGF+DCQYFPSPSPPPPPPPSVP
Sbjct: 121 LYKNGSDDWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFDDCQYFPSPSPPPPPPPSVP 180

Query: 181 STAGPLPRWKWIASLIPVLFSCFLL 199
           STAG LPRWKW+ASLIPVLFS FLL
Sbjct: 181 STAGCLPRWKWLASLIPVLFSSFLL 205

[Close]

BLAST of CsGy3G016360 vs. NCBI nr
Match: XP_038877430.1 (embryo-specific protein ATS3B-like [Benincasa hispida])

HSP 1 Score: 319 bits (818), Expect = 1.28e-108
Identity = 159/193 (82.38%), Postives = 169/193 (87.56%), Query Frame = 0


Query: 10  MATPLLPFFFFSFFSIS-AAQSTAS------KSLSIAYIREAGDCNYRVNITTSCSSPFY 69
           MATPLLPFF FSFFSIS AAQST S      KSLSI YI++AGDCNYRVNITTSCSSPF+
Sbjct: 5   MATPLLPFFIFSFFSISSAAQSTGSLPQTAPKSLSIGYIQKAGDCNYRVNITTSCSSPFH 64

Query: 70  ISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGSDN 129
           IS+EIGVLFGDA GNQIYEPKLEVES NAF KC KDIFELIGPC DQICFFYLYK+GSDN
Sbjct: 65  ISAEIGVLFGDAHGNQIYEPKLEVESKNAFAKCSKDIFELIGPCTDQICFFYLYKSGSDN 124

Query: 130 WIPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGPLPR 189
           WIPE VEISSPDIDT KY YNSSIPNDTWYGF+DCQYFPSPSPPPPPP  VPS A  +PR
Sbjct: 125 WIPETVEISSPDIDTAKYKYNSSIPNDTWYGFDDCQYFPSPSPPPPPP--VPSAACRVPR 184

Query: 190 WKWIASLIPVLFS 195
           WKW+AS+IP+L S
Sbjct: 185 WKWLASVIPLLLS 195

[Close]

BLAST of CsGy3G016360 vs. NCBI nr
Match: XP_022923162.1 (embryo-specific protein ATS3B-like [Cucurbita moschata])

HSP 1 Score: 295 bits (754), Expect = 6.21e-99
Identity = 147/192 (76.56%), Postives = 160/192 (83.33%), Query Frame = 0


Query: 10  MATPLLPFFFFSFFSISAAQSTAS------KSLSIAYIREAGDCNYRVNITTSCSSPFYI 69
           MA  LL FF F+FFSISAA ST S      KSL+I YI++AGDCNYRVNITTSCSSPF+I
Sbjct: 1   MAMSLLSFFIFTFFSISAAVSTGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHI 60

Query: 70  SSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGSDNW 129
           ++EIGVLFGDA GNQIYEPKLEVES  AF KC KDIFEL GPC DQICFFYLYKNGSD+W
Sbjct: 61  TAEIGVLFGDAHGNQIYEPKLEVESSKAFAKCSKDIFELTGPCTDQICFFYLYKNGSDDW 120

Query: 130 IPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGPLPRW 189
           IPE VEISSPDIDTVKY YNSSIP+DTWYGF+DCQYF +P PPPPP P  PSTAG L R 
Sbjct: 121 IPETVEISSPDIDTVKYKYNSSIPDDTWYGFDDCQYF-TPPPPPPPSPPAPSTAGHLRRL 180

Query: 190 KWIASLIPVLFS 195
           KW+A +IPVL S
Sbjct: 181 KWLAFVIPVLLS 191

[Close]

BLAST of CsGy3G016360 vs. NCBI nr
Match: KAG6576766.1 (Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia] >KAG6576772.1 Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290 bits (743), Expect = 2.94e-97
Identity = 146/192 (76.04%), Postives = 159/192 (82.81%), Query Frame = 0


Query: 10  MATPLLPFFFFSFFSISAAQSTAS------KSLSIAYIREAGDCNYRVNITTSCSSPFYI 69
           MA  LL FF F+FFS SAA ST S      KSL+I YI++AGDCNYRVNITTSCSSPF+I
Sbjct: 1   MAMSLLSFFIFTFFSFSAAVSTGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHI 60

Query: 70  SSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGSDNW 129
           ++EIGVLFGDA GNQIYE KLEVES  AF KC KDIFEL GPC DQICFFYLYKNGSD+W
Sbjct: 61  TAEIGVLFGDAHGNQIYERKLEVESSKAFAKCSKDIFELTGPCTDQICFFYLYKNGSDDW 120

Query: 130 IPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGPLPRW 189
           IPE VEISSPDIDTVKY YNSSIP+DTWYGF+DCQYF SP PPPP PP+ PSTAG L R 
Sbjct: 121 IPETVEISSPDIDTVKYKYNSSIPDDTWYGFDDCQYFTSPPPPPPSPPA-PSTAGHLRRL 180

Query: 190 KWIASLIPVLFS 195
           KW+A +IPVL S
Sbjct: 181 KWLAFVIPVLLS 191

[Close]

BLAST of CsGy3G016360 vs. ExPASy TrEMBL
Match: A0A0A0L8G7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G177970 PE=4 SV=1)

HSP 1 Score: 407 bits (1047), Expect = 7.65e-144
Identity = 197/199 (98.99%), Postives = 197/199 (98.99%), Query Frame = 0


Query: 1   MDKTSSSLHMATPLLPFFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSP 60
           MDKTSSSLHMATPLLPFFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSP
Sbjct: 1   MDKTSSSLHMATPLLPFFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSP 60

Query: 61  FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS 120
           FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS
Sbjct: 61  FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS 120

Query: 121 DNWIPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGPL 180
           DNWIPE VEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAG L
Sbjct: 121 DNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGSL 180

Query: 181 PRWKWIASLIPVLFSCFLL 199
           PRWKWIASLIPVLFSCFLL
Sbjct: 181 PRWKWIASLIPVLFSCFLL 199

[Close]

BLAST of CsGy3G016360 vs. ExPASy TrEMBL
Match: A0A1S3AXL4 (uncharacterized protein LOC103484014 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484014 PE=4 SV=1)

HSP 1 Score: 371 bits (952), Expect = 2.89e-129
Identity = 183/205 (89.27%), Postives = 189/205 (92.20%), Query Frame = 0


Query: 1   MDKTSSSLHMATPLLPFFFFSFFSISAAQST------ASKSLSIAYIREAGDCNYRVNIT 60
           M + SSSL+MATPLLPFF FS FSISA+QST      ASKSLSIAYIREAGDCNYRVNIT
Sbjct: 1   MKQKSSSLNMATPLLPFFIFSLFSISASQSTGSLPQPASKSLSIAYIREAGDCNYRVNIT 60

Query: 61  TSCSSPFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFY 120
           TSCSSPFYISSEIGVLFGDA GNQIYEPKLEVESGNAF KCRKDIFELIGPC DQICFFY
Sbjct: 61  TSCSSPFYISSEIGVLFGDAHGNQIYEPKLEVESGNAFGKCRKDIFELIGPCTDQICFFY 120

Query: 121 LYKNGSDNWIPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVP 180
           LYKNGSD+WIPE VEISSPDIDTVKYTYNSSIPNDTWYGF+DCQYFPSPSPPPPPPPSVP
Sbjct: 121 LYKNGSDDWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFDDCQYFPSPSPPPPPPPSVP 180

Query: 181 STAGPLPRWKWIASLIPVLFSCFLL 199
           STAG LPRWKW+ASLIPVLFS FLL
Sbjct: 181 STAGCLPRWKWLASLIPVLFSSFLL 205

[Close]

BLAST of CsGy3G016360 vs. ExPASy TrEMBL
Match: A0A6J1E5E8 (embryo-specific protein ATS3B-like OS=Cucurbita moschata OX=3662 GN=LOC111430910 PE=4 SV=1)

HSP 1 Score: 295 bits (754), Expect = 3.01e-99
Identity = 147/192 (76.56%), Postives = 160/192 (83.33%), Query Frame = 0


Query: 10  MATPLLPFFFFSFFSISAAQSTAS------KSLSIAYIREAGDCNYRVNITTSCSSPFYI 69
           MA  LL FF F+FFSISAA ST S      KSL+I YI++AGDCNYRVNITTSCSSPF+I
Sbjct: 1   MAMSLLSFFIFTFFSISAAVSTGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHI 60

Query: 70  SSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGSDNW 129
           ++EIGVLFGDA GNQIYEPKLEVES  AF KC KDIFEL GPC DQICFFYLYKNGSD+W
Sbjct: 61  TAEIGVLFGDAHGNQIYEPKLEVESSKAFAKCSKDIFELTGPCTDQICFFYLYKNGSDDW 120

Query: 130 IPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGPLPRW 189
           IPE VEISSPDIDTVKY YNSSIP+DTWYGF+DCQYF +P PPPPP P  PSTAG L R 
Sbjct: 121 IPETVEISSPDIDTVKYKYNSSIPDDTWYGFDDCQYF-TPPPPPPPSPPAPSTAGHLRRL 180

Query: 190 KWIASLIPVLFS 195
           KW+A +IPVL S
Sbjct: 181 KWLAFVIPVLLS 191

[Close]

BLAST of CsGy3G016360 vs. ExPASy TrEMBL
Match: A0A6J1CJM9 (embryo-specific protein ATS3B-like OS=Momordica charantia OX=3673 GN=LOC111011611 PE=4 SV=1)

HSP 1 Score: 288 bits (737), Expect = 2.09e-96
Identity = 143/193 (74.09%), Postives = 162/193 (83.94%), Query Frame = 0


Query: 6   SSLHMATPLLPFFFFSFFSISAAQSTAS------KSLSIAYIREAGDCNYRVNITTSCSS 65
           SS+ MAT LLPF  F+FF+ISAA+STAS      KSL+IAYI++ GDCNYRVNITTSCSS
Sbjct: 14  SSVKMAT-LLPFLVFTFFAISAAESTASLPQAAPKSLTIAYIQQEGDCNYRVNITTSCSS 73

Query: 66  PFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNG 125
           PFY S+EIGVLFGDA GNQIYEPKLEVES NAF KC KDIFE++GPC+DQICFFYLYKNG
Sbjct: 74  PFYNSAEIGVLFGDAHGNQIYEPKLEVESKNAFGKCSKDIFEVVGPCVDQICFFYLYKNG 133

Query: 126 SDNWIPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGP 185
           SD+WIPE V+IS  DI+TV+Y YNSSIP +TWYGF+DC YFP PSPPPPPPP  PS AGP
Sbjct: 134 SDDWIPETVQISGSDINTVEYKYNSSIPRETWYGFDDCDYFPPPSPPPPPPPPAPSAAGP 193

Query: 186 -LPR-WKWIASLI 190
            LP  W+W+A  I
Sbjct: 194 RLPATWRWLAYAI 205

[Close]

BLAST of CsGy3G016360 vs. ExPASy TrEMBL
Match: A0A6J1J8M6 (embryo-specific protein ATS3B-like OS=Cucurbita maxima OX=3661 GN=LOC111482747 PE=4 SV=1)

HSP 1 Score: 284 bits (727), Expect = 3.89e-95
Identity = 143/192 (74.48%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 10  MATPLLPFFFFSFFSISAAQSTAS------KSLSIAYIREAGDCNYRVNITTSCSSPFYI 69
           M  P L FF F FFSISAA S+ S      KSL+I YI++AGDCNYRVNITTSCSSPF+I
Sbjct: 1   MVMPPLSFFIFFFFSISAAVSSGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHI 60

Query: 70  SSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGSDNW 129
           ++EIGVLFGDA GNQIYEPKLEVES  A  KC KDIFEL GPC DQICFFYLYK GSD+W
Sbjct: 61  TAEIGVLFGDAHGNQIYEPKLEVESSKALAKCSKDIFELTGPCTDQICFFYLYKKGSDDW 120

Query: 130 IPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGPLPRW 189
           IPE VEISSPDIDTVKY YNSSIP DTWYGF+DCQYF SP PPPP PP+ PSTAG   R 
Sbjct: 121 IPETVEISSPDIDTVKYKYNSSIPEDTWYGFDDCQYFTSPPPPPPSPPA-PSTAGHQRRL 180

Query: 190 KWIASLIPVLFS 195
           KW+A +IPVL S
Sbjct: 181 KWLAYVIPVLLS 191

[Close]

BLAST of CsGy3G016360 vs. TAIR 10
Match: AT5G62200.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 124.8 bits (312), Expect = 7.9e-29
Identity = 65/158 (41.14%), Postives = 87/158 (55.06%), Query Frame = 0


Query: 10  MATPLLPFFFFSFFSISAAQSTASK---------SLSIAYIREAGD-CNYRVNITTSCSS 69
           MA+  L F   SF  I +     SK         S +++ I++ G+ C Y V I+TSCSS
Sbjct: 1   MASVRLFFTLISFVFIISTSVYESKVLDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSS 60

Query: 70  PFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNG 129
             Y   +I V FGD  GNQIY P+L+  S   F +C  D F++ GPC  QIC+ YLY++G
Sbjct: 61  TRYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSG 120

Query: 130 SDNWIPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDC 158
            D WIP  V+I S     V + YN+ +P   WYGF  C
Sbjct: 121 PDGWIPNTVKIYSHGSKAVTFPYNTYVPESVWYGFNYC 158

[Close]

BLAST of CsGy3G016360 vs. TAIR 10
Match: AT2G41475.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 122.1 bits (305), Expect = 5.1e-28
Identity = 62/157 (39.49%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 8   LHMATPLLPFFFFSFFSISAAQS-TASKSLSI------AYIREAGDCNYRVNITTSCSSP 67
           L +A PL  F   SF   S+A+S   +K L I        +  A  C+Y V I TSCSS 
Sbjct: 2   LRLAIPLFLFALCSFTLFSSARSFITTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSSV 61

Query: 68  FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS 127
            Y   +I + FGD  GN++Y  +L+  S   F KC  D +++ GPC+  +C+ YL + GS
Sbjct: 62  SYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGS 121

Query: 128 DNWIPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDC 158
           D W PE V+I    I +V + YN  +PN  WYGF  C
Sbjct: 122 DGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVC 158

[Close]

BLAST of CsGy3G016360 vs. TAIR 10
Match: AT5G62210.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 120.2 bits (300), Expect = 1.9e-27
Identity = 61/165 (36.97%), Postives = 85/165 (51.52%), Query Frame = 0


Query: 41  IREAGDCNYRVNITTSCSSPFYISSEIGVLFGDAQGNQIYEPKLE--VESGNAFRKCRKD 100
           + E   C Y V +TTSC SP +   ++ +  GDA  NQ+  P+L+  +  G  F KC  D
Sbjct: 34  LHEEESCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSD 93

Query: 101 IFELIGPCIDQICFFYLYKNGSDNWIPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQ 160
            F++ G C++ IC  Y+Y++G+D WIPE VEI      +VK+ +N ++P + WYG   C 
Sbjct: 94  TFQVKGKCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYCN 153

Query: 161 ------------------------YFP--SPSPPPPPPPSVPSTA 178
                                   YFP   PS PPPPPPS PS A
Sbjct: 154 NTDLPPPSPDFPPFSPSIPPPSPPYFPPEPPSIPPPPPPSPPSAA 198

[Close]

BLAST of CsGy3G016360 vs. TAIR 10
Match: AT5G07190.1 (seed gene 3 )

HSP 1 Score: 113.2 bits (282), Expect = 2.4e-25
Identity = 68/177 (38.42%), Postives = 96/177 (54.24%), Query Frame = 0


Query: 17  FFFFSFFSISAAQSTASKSLSIAYIREAGDCNYRVNITTSCSSPFYISSEIGVLFGDAQG 76
           F FF+F  +     T +  LSI  +++ G C Y V + TSC SP     +I ++FGDA G
Sbjct: 10  FLFFAFIFV-----THAFDLSIIQMQQ-GTCPYTVVVMTSCLSPESTRDQISIVFGDADG 69

Query: 77  NQIYEPKLE--VESGNAFRKCRKDIFELIGPCI-DQICFFYLYKNGSDNWIPEIVEISSP 136
           N++Y PKL   V       KC  + F++ G C+ D IC  Y+ +NG D W+PE +EI S 
Sbjct: 70  NKVYAPKLGGLVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSE 129

Query: 137 DIDTVKYTYNSSIPN-DTWYGFEDCQYFPSPSPP--PPP------PPSVPSTAGPLP 182
              +VK+ ++ S+P  +TWYG  +C     PS P  PPP      PP  P+T  P P
Sbjct: 130 GSKSVKFDFSKSVPQLNTWYGHNNCNTTGRPSSPDLPPPHFPPEFPPETPTTPPPPP 180

[Close]

BLAST of CsGy3G016360 vs. TAIR 10
Match: AT5G07190.2 (seed gene 3 )

HSP 1 Score: 111.3 bits (277), Expect = 9.0e-25
Identity = 60/151 (39.74%), Postives = 83/151 (54.97%), Query Frame = 0


Query: 43  EAGDCNYRVNITTSCSSPFYISSEIGVLFGDAQGNQIYEPKLE--VESGNAFRKCRKDIF 102
           + G C Y V + TSC SP     +I ++FGDA GN++Y PKL   V       KC  + F
Sbjct: 2   QQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTF 61

Query: 103 ELIGPCI-DQICFFYLYKNGSDNWIPEIVEISSPDIDTVKYTYNSSIPN-DTWYGFEDCQ 162
           ++ G C+ D IC  Y+ +NG D W+PE +EI S    +VK+ ++ S+P  +TWYG  +C 
Sbjct: 62  QVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCN 121

Query: 163 YFPSPSPP--PPP------PPSVPSTAGPLP 182
               PS P  PPP      PP  P+T  P P
Sbjct: 122 TTGRPSSPDLPPPHFPPEFPPETPTTPPPPP 152

The following BLAST results are available for this feature:

BLAST of CsGy3G016360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPM5	1.1e-27	41.14	Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1	[more]
Q681K2	7.2e-27	39.49	Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1	[more]
Q9LYP6	3.3e-24	38.42	Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1	[more]

BLAST of CsGy3G016360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148153.1	1.58e-143	98.99	embryo-specific protein ATS3A [Cucumis sativus]	[more]
XP_008439124.1	5.98e-129	89.27	PREDICTED: uncharacterized protein LOC103484014 isoform X1 [Cucumis melo]	[more]
XP_038877430.1	1.28e-108	82.38	embryo-specific protein ATS3B-like [Benincasa hispida]	[more]
XP_022923162.1	6.21e-99	76.56	embryo-specific protein ATS3B-like [Cucurbita moschata]	[more]
KAG6576766.1	2.94e-97	76.04	Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]

BLAST of CsGy3G016360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8G7	7.65e-144	98.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G177970 PE=4 SV=1	[more]
A0A1S3AXL4	2.89e-129	89.27	uncharacterized protein LOC103484014 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1E5E8	3.01e-99	76.56	embryo-specific protein ATS3B-like OS=Cucurbita moschata OX=3662 GN=LOC111430910...	[more]
A0A6J1CJM9	2.09e-96	74.09	embryo-specific protein ATS3B-like OS=Momordica charantia OX=3673 GN=LOC11101161...	[more]
A0A6J1J8M6	3.89e-95	74.48	embryo-specific protein ATS3B-like OS=Cucurbita maxima OX=3661 GN=LOC111482747 P...	[more]

BLAST of CsGy3G016360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62200.1	7.9e-29	41.14	Embryo-specific protein 3, (ATS3)	[more]
AT2G41475.1	5.1e-28	39.49	Embryo-specific protein 3, (ATS3)	[more]
AT5G62210.1	1.9e-27	36.97	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	2.4e-25	38.42	seed gene 3	[more]
AT5G07190.2	9.0e-25	39.74	seed gene 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010417	Embryo-specific ATS3	PFAM	PF06232	ATS3	coord: 42..157 e-value: 9.8E-37 score: 125.6
None	No IPR available	PANTHER	PTHR31718:SF32	EMBRYO-SPECIFIC PROTEIN ATS3B	coord: 5..193
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 5..193
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 46..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G016360.2	CsGy3G016360.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding