CsGy3G013862 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G013862
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 10296430 .. 10296786 (+)
RNA-Seq ExpressionCsGy3G013862
SyntenyCsGy3G013862
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTATGATCATGGTCGCCAGAAACCAAAGCAAGCATTTTTTAATGAAGATTGGGAAATGATAGAAATCAAATTCAACTCAGAAGTGATGAAATTTTCGAAACTTTTTGTTGTACCTACCAAGGAAAACTTCACCACAGCTGGACTCAGACAGGGATGGTATCAGAAAAGTCTTCTCTCACATCGTAATGTCCTTTCTGAAACAGAGAGTTTTGTCATTCTCAAGAGTCAAGTTGAATTGGAAGTTATTTTTCTAAGTTCAGTGGAAGTAGTTGGTTCCCTTTTGGTTTATCTGGAAAAAAGGAGCTCAACAATACTTCACCATTGTCAACCTTATTCTCAAGTAATGGGGTAG

mRNA sequence

ATGAAGTATGATCATGGTCGCCAGAAACCAAAGCAAGCATTTTTTAATGAAGATTGGGAAATGATAGAAATCAAATTCAACTCAGAAGTGATGAAATTTTCGAAACTTTTTGTTGTACCTACCAAGGAAAACTTCACCACAGCTGGACTCAGACAGGGATGGTATCAGAAAAGTCTTCTCTCACATCGTAATGTCCTTTCTGAAACAGAGAGTTTTGTCATTCTCAAGAGTCAAGTTGAATTGGAAGTTATTTTTCTAAGTTCAGTGGAAGTAGTTGGTTCCCTTTTGGTTTATCTGGAAAAAAGGAGCTCAACAATACTTCACCATTGTCAACCTTATTCTCAAGTAATGGGGTAG

Coding sequence (CDS)

ATGAAGTATGATCATGGTCGCCAGAAACCAAAGCAAGCATTTTTTAATGAAGATTGGGAAATGATAGAAATCAAATTCAACTCAGAAGTGATGAAATTTTCGAAACTTTTTGTTGTACCTACCAAGGAAAACTTCACCACAGCTGGACTCAGACAGGGATGGTATCAGAAAAGTCTTCTCTCACATCGTAATGTCCTTTCTGAAACAGAGAGTTTTGTCATTCTCAAGAGTCAAGTTGAATTGGAAGTTATTTTTCTAAGTTCAGTGGAAGTAGTTGGTTCCCTTTTGGTTTATCTGGAAAAAAGGAGCTCAACAATACTTCACCATTGTCAACCTTATTCTCAAGTAATGGGGTAG

Protein sequence

MKYDHGRQKPKQAFFNEDWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLLSHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMG*
Homology
[Close]
BLAST of CsGy3G013862 vs. NCBI nr
Match: KGN57047.1 (hypothetical protein Csa_010340 [Cucumis sativus])

HSP 1 Score: 234 bits (597), Expect = 3.19e-77
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MKYDHGRQKPKQAFFNEDWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL 60
           MKYDHGRQKPKQAFFNE+WEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL
Sbjct: 1   MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL 60

Query: 61  SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMG 118
           SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMG
Sbjct: 61  SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMG 118

[Close]
BLAST of CsGy3G013862 vs. NCBI nr
Match: KAG6582257.1 (hypothetical protein SDJN03_22259, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 48.5 bits (114), Expect = 3.99e-04
Identity = 28/53 (52.83%), Postives = 34/53 (64.15%), Query Frame = 0 

Query: 1   MKYDHGRQKPKQAFFNEDWEMI--EIKFNSEVMKFSKLFVVPTKENFTTAGLR 51
           + Y H RQK KQ       +M+  EIKFNS+VMK  K+ V P KENFTTA L+
Sbjct: 61  INYAHCRQKSKQPI-----KMVKGEIKFNSQVMKHFKVSVAPAKENFTTARLK 108

[Close]
BLAST of CsGy3G013862 vs. ExPASy TrEMBL
Match: A0A0A0L8W3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150760 PE=4 SV=1)

HSP 1 Score: 234 bits (597), Expect = 1.54e-77
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MKYDHGRQKPKQAFFNEDWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL 60
           MKYDHGRQKPKQAFFNE+WEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL
Sbjct: 1   MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL 60

Query: 61  SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMG 118
           SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMG
Sbjct: 61  SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMG 118

The following BLAST results are available for this feature:
BLAST of CsGy3G013862 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G013862 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57047.13.19e-7799.15hypothetical protein Csa_010340 [Cucumis sativus][more]
KAG6582257.13.99e-0452.83hypothetical protein SDJN03_22259, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CsGy3G013862 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8W31.54e-7799.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150760 PE=4 SV=1[more]
BLAST of CsGy3G013862 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G013862.1CsGy3G013862.1mRNA