CsGy3G009865 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G009865
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 7888894 .. 7889956 (+)
RNA-Seq ExpressionCsGy3G009865
SyntenyCsGy3G009865
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTAAGGAAATTAGTAAGTTAGAGGCGTTGAAGGAACGCGAACACGAACGCGGTTGATACTCTTTTCATTTGACGTACAAATTACACAACAAAAAAACAGAGAGATTTGCTTTTTGCAAATCAATCTCTCGGAATTGTAGGTTTCTGTTTCTCTTCTTCGCCATTTTTACGGAGCACACCACAACCTCTCTTCTTCTTCCTACGTAATCTCTCTCTTGATCTCTCTTATCTTTCTTCTTCTTCTTCTTTGATTTTTCCTCTACTTTTCTGTGTTATTGTTTCCATCGGAGTCTTTCGTTTTCTGGATTTGTTGGTAAGAGGGTTTTCCTTTATTTGTGATATATGTTTGATTCCGGTTTCTGTTTGTTATGTTTACATCATTCATTATATTCATGTTATCTTGTTCTTGTTCTTCATTGTGATCATTTTTCTGATGAATATCATTTATTGGATGCTTTTTTGTTCCTTTCTTCTCTTTTTCCCGCATTTTTTGTATTGCTAAAAAACGATTGAATTTGAATGTATGGTTATTTTTTCTAAAGATAATTTCATCTGTGCGAGTTTGTCGGTGTTCTTCATGTCTTCTTGATTTTCAAGAGTTGCACTGTTTAGAGTTGTTGATCTATTGTTCTATTACGAACTTTTAATGTATTGATGTTGAATTAATAGGTGGATATGATTTTACTGGATAAATAAGCTTGAAGTAATGGCTTTAGCTATCGATTTCGCATCATTTGCCCACAACTGTAAATTTCGCTTCGAGTTCATCTTATTTGATTCTGTTTAATTTTTAGTCCGTCTCGGATTTTCTTTGGCATCAATAAGATCGGTCTAACATGCAATTTAAACCTCAATCGATAAATGATTCTGAAGACACAAATAACTTGCTTGGCATATCATCATCCTCTTCAGTTATTCATTGATATTTATGCCCTTAAATTTTCTGTTACCCGTCCTCTACAAAATGTTTCCCAATCTTCTAAAAATTATATGCCTGATACAGCATTCTTTTGATTCCATTATCTATTCATAGCTTGGTTTAGAGCTCTTCGAAACTTGA

mRNA sequence

ATGTTTAAGGAAATTAGTAAGTTAGAGGCGTTGAAGGAACGCGAACACGAACGCGGTTTCTGTTTCTCTTCTTCGCCATTTTTACGGAGCACACCACAACCTCTCTTCTTCTTCCTACGTAATCTCTCTCTTGATCTCTCTTATCTTTCTTCTTCTTCTTCTTTGATTTTTCCTCTACTTTTCTGTGTTATTGTTTCCATCGGAGTCTTTCGTTTTCTGGATTTGTTGCTTGGTTTAGAGCTCTTCGAAACTTGA

Coding sequence (CDS)

ATGTTTAAGGAAATTAGTAAGTTAGAGGCGTTGAAGGAACGCGAACACGAACGCGGTTTCTGTTTCTCTTCTTCGCCATTTTTACGGAGCACACCACAACCTCTCTTCTTCTTCCTACGTAATCTCTCTCTTGATCTCTCTTATCTTTCTTCTTCTTCTTCTTTGATTTTTCCTCTACTTTTCTGTGTTATTGTTTCCATCGGAGTCTTTCGTTTTCTGGATTTGTTGCTTGGTTTAGAGCTCTTCGAAACTTGA

Protein sequence

MFKEISKLEALKEREHERGFCFSSSPFLRSTPQPLFFFLRNLSLDLSYLSSSSSLIFPLLFCVIVSIGVFRFLDLLLGLELFET*
Homology
[Close]
BLAST of CsGy3G009865 vs. NCBI nr
Match: KGN56622.1 (hypothetical protein Csa_010855 [Cucumis sativus])

HSP 1 Score: 160 bits (404), Expect = 3.49e-49
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MFKEISKLEALKEREHERGFCFSSSPFLRSTPQPLFFFLRNLSLDLSYLSSSSSLIFPLL 60
          MFKEISKLEALKEREHERGFCFSSSPFLRSTPQPLFFFLRNLSLDLSYLSSSSSLIFPLL
Sbjct: 1  MFKEISKLEALKEREHERGFCFSSSPFLRSTPQPLFFFLRNLSLDLSYLSSSSSLIFPLL 60

Query: 61 FCVIVSIGVFRFLDLLLGLELFET 84
          FCVIVSIGVFRFLDLLLGLELFET
Sbjct: 61 FCVIVSIGVFRFLDLLLGLELFET 84

[Close]
BLAST of CsGy3G009865 vs. ExPASy TrEMBL
Match: A0A0A0L7N7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126860 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 1.69e-49
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MFKEISKLEALKEREHERGFCFSSSPFLRSTPQPLFFFLRNLSLDLSYLSSSSSLIFPLL 60
          MFKEISKLEALKEREHERGFCFSSSPFLRSTPQPLFFFLRNLSLDLSYLSSSSSLIFPLL
Sbjct: 1  MFKEISKLEALKEREHERGFCFSSSPFLRSTPQPLFFFLRNLSLDLSYLSSSSSLIFPLL 60

Query: 61 FCVIVSIGVFRFLDLLLGLELFET 84
          FCVIVSIGVFRFLDLLLGLELFET
Sbjct: 61 FCVIVSIGVFRFLDLLLGLELFET 84

The following BLAST results are available for this feature:
BLAST of CsGy3G009865 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G009865 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56622.13.49e-49100.00hypothetical protein Csa_010855 [Cucumis sativus][more]
BLAST of CsGy3G009865 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7N71.69e-49100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126860 PE=4 SV=1[more]
BLAST of CsGy3G009865 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G009865.1CsGy3G009865.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane