CsGy3G006385 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G006385
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 5407894 .. 5411068 (+)
RNA-Seq ExpressionCsGy3G006385
SyntenyCsGy3G006385
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCTTCCTCTTCTTCAGCCATGGCCATCATTTCCCACTCTCGCACTTCACCACACATTAACAGAGAAGGCACATGTGGGAGGGTCACCAGTTGGGGAAAAGAAATTGAACCCAAGAACGTGATGAACAGGTGAAGAAATTCCTATTTTATTGATGTAACTTTCAACTTTTGCCAACGGCGGAATAGTGTGATTGTTTTTTGTTTCTTGTTTTTCTTTGTTTTTTTTCAATTTTTCTTTTTGTTTGATTTCGGACATCGAGGAATTCTTTTGCTTGATTGTTGGGAAAGTAAAAGGATGCTTGAGTGTGGGGACTTAGATAGAAAAGAAAAGGGGAAAATATATGCTTCAATCTATTTTCAACCTCTTCTTTATTGTGTTTTCTTTTCATGGGGCCCTTCACTTTTTCAAAAAAAAATGTCTTACATGGAATTGGGAACTTGGTTTTTCTCTCTTTTTCTGTTGTGCCCTTTTGGATGAAATTAAATTTATCGTCCATTTAGTGAAGAAAGTAATGAACCGCATCTCAAACCCCATCAAATCTTGTTCTGATGAGCCATTTGTCTTCCTATGATTTATGAATTTTTTTTTTATATCAGTAAGTTTCTTGGTCAGCATCAACTTATGGCACAGGACACTCTAATATTTCGGGTGTTAAGAAAATTTATAAGATGTTAAATTCCAAGTAGGTGGTTACGTGGATTGAACCATCACCTCTTAGTTCTGAGTGTTTGGTTTCCTTTCTTTGCTTGTTTTAGCTTTCGAAGAGTGGGGCAAATTTTGTTCTATTTGTGTGACTTTTTGTGGCCTGGTGTTGGGCACTTTATGTGTTTGAGCCTCAGTCAACAAACAGATGATTCTCTTATAACCATTTGAGTCAATTTTTTAGCCGAAACAAATGTATGTTGTTTTAAAATTTACTAGTTGGTTTTTTTAAACTAATAGGATTTCGATGTCTTTATCAGACATGGTGATTGTTCTGTTGACAAAAAGATTTCAATCAATGCATTTTAGGCAGAAGAACCGCATAACCGCATATGTGTTGTAATTATTACAGTTTTCTTTTCCACAACACTTTGATTTCTTTGGTAAGGAGAGAAGTCTTTGCTTAACATTTTTGATTCCTTCATATCAGGTGGATTGTAAATTTGTAATGCATTAAAATATCACAATATCTTTATAAAAAAATTAACACAAAAAATACAATAAAATAGAACTGGTCTGTAAGTACGGGTTATCCGTACAAAAAACCCCTCAATGGTGCCAAGTAAAGACTTGGGGAGGAATTAGGAATGATGGAGGAAGGAGATGCAAAATGCCCCCTCATAGTCCAACTTAGATTTTAAAATTTTCTCTCTTACATTTTATCCGCGAAATTTTCAAAATCAAAAGAGTATATTTTTTAAATGCTTAAATTGCAATTTTTTTCCCTTTGTTAAGAAATTTCTTACCCTTGTACCCTGTGTTTGGTGACATTCTCTAAAAGATCGTGTGTTAAAGCCACCAACGAAAAACAACTTAAAATTAATGAAGATAAAGTTGAAGACATTGGTAGTAATCTTCAAGATTTGGCTGAGATGTTTGGAGATACCCTCCGATGTCTCGAGGACTAGAAAACTTAATAACGTGAAACTCTTCTTTGTTTTTTAAAGCCTAGCTTTCGGGGAGGCAAAGCCTCTCTAAAGATTAGTGGGAGATGAGCATATGCACAATATGAGTGGAGCCCACAATACCCAGTTGTTAAAAAAATTAAATTAAAGTAATAAAGAAAAACTGATGGTATGGTTTAATTACTTTAACACATTAAACTTGCAGGTGGTACAGCAAATGGCTTTAGTGTTTCTGACAAAAGTTATGGGTTCCTCTCAACAGGCTATGTGAAGAGGAGAGATATATGAGGAATAATTGTGGTCTACATCACATTCTTTCCAACCTCTGCTCTTTTTTGCTACCAAACCATTTTCTTTCTTCTCTTGAATTATATGGATGTGCTTGTGCTTGGTACAGCATAGCTGTAAGGTGAGCAAAACATTATTCTCTTATGTTTCTCTTTATTATGTTGTTTTTTATCTTTATATTCTTTCTCTGAAGGAATAATTTGCTACCTATTTTTTTTATTTTTTTTTTATTTTCTCTTTTCATTCTTTTTGATAGAAAATGGTTACACAAACAAGACATGCCTTCACTTTGGGCCAAACTTTTGTTTTGCTTAAATTAATATATCAATATCATGACTGCTTTTTGTATTCTTTTTCCTTTCATCTGATTTCATGGTGTTTTTATATGAGATTGTGTGAGATTTGCTACCCTCCCCATGATGACATATGAAGGGACTTATTCAGATTGAACTTATTCAATACTTATTCATTATGAATTGGAGAATTTCAAAATGTATTTTTAGGCTAAAAGGTCTGTAAAGAAAACTTGAGAAATTTTTAGTGTTACTCTTATTTCATTGACAATAATTTTTTTTAACAGCCATAGCATAGTGACCAGTTCTAATAATGTCTCCATAAAAACCATTATCACAGAATGATTAATTATATCAAAGCAAAGCATATAGTTTATCTTTGTTTCCTCTTCTACTCTGTCCGTAAATATGGATGAAGAATCATTGTTGAGGTAAAAGTAATGGTTCTGAGTATGGGTTAGTGCATACAATTTGATTCAATGTTATCTTTAAAATTTAGGAGATGATCTGAATGGGGCAGGCTGTAAAACCTCCTCCAACTTCCTAAACACCTTTAGTTACCTCACCCATGGTGACTGGGTTTAGTTTAGGCTAAAATCTAAATGAGATTTATTTCTTTTAAAATGTGGAAACTTTTTGCAATTACCAATGAGCCCTTATTTTGGCTTCCCAGACAGGGAGGGCCATTCTTTTGCTTTCTTAAAGTTTGTTGCTTCAGACAAAGTATAGTATTCACTAAGCTAGGCATCACAATTTAATGAAAAAAGGTGTAGTAATCAAATTATAATTAACTCTTTTCCCATTTATTTTATTTTTCTATAGTGGAAAGTGTGAGTTGGTGCGGGTTGGATGCTTTCTTTATTAAATAATGGTTTGAGAAAAATAGATGTCTTGTTTTTTCATGACAGGTTAGCTATGGAATTGGAAGTATTGGATGCAAACTATCTCTCAAAACTAAATAAAAACTTTAGATGCTCTTAA

mRNA sequence

ATGAAACCTTCCTCTTCTTCAGCCATGGCCATCATTTCCCACTCTCGCACTTCACCACACATTAACAGAGAAGGCACATGTGGGAGGGTCACCAGTTGGGGAAAAGAAATTGAACCCAAGAACGTGATGAACAGGCTATGTGAAGAGGAGAGATATATGAGGAATAATTGTGGTCTACATCACATTCTTTCCAACCTCTGCTCTTTTTTGCTACCAAACCATTTTCTTTCTTCTCTTGAATTATATGGATGTGCTTGTGCTTGGTACAGCATAGCTGTAAGGTTAGCTATGGAATTGGAAGTATTGGATGCAAACTATCTCTCAAAACTAAATAAAAACTTTAGATGCTCTTAA

Coding sequence (CDS)

ATGAAACCTTCCTCTTCTTCAGCCATGGCCATCATTTCCCACTCTCGCACTTCACCACACATTAACAGAGAAGGCACATGTGGGAGGGTCACCAGTTGGGGAAAAGAAATTGAACCCAAGAACGTGATGAACAGGCTATGTGAAGAGGAGAGATATATGAGGAATAATTGTGGTCTACATCACATTCTTTCCAACCTCTGCTCTTTTTTGCTACCAAACCATTTTCTTTCTTCTCTTGAATTATATGGATGTGCTTGTGCTTGGTACAGCATAGCTGTAAGGTTAGCTATGGAATTGGAAGTATTGGATGCAAACTATCTCTCAAAACTAAATAAAAACTTTAGATGCTCTTAA

Protein sequence

MKPSSSSAMAIISHSRTSPHINREGTCGRVTSWGKEIEPKNVMNRLCEEERYMRNNCGLHHILSNLCSFLLPNHFLSSLELYGCACAWYSIAVRLAMELEVLDANYLSKLNKNFRCS*
Homology
[Close]
BLAST of CsGy3G006385 vs. NCBI nr
Match: XP_031739301.1 (uncharacterized protein LOC101206733 isoform X2 [Cucumis sativus])

HSP 1 Score: 244 bits (624), Expect = 1.05e-81
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MKPSSSSAMAIISHSRTSPHINREGTCGRVTSWGKEIEPKNVMNRLCEEERYMRNNCGLH 60
           MKPSSSSAMAIISHSRTSPHINREGTCGRVTSWGKEIEPKNVMNRLCEEERYMRNNCGLH
Sbjct: 1   MKPSSSSAMAIISHSRTSPHINREGTCGRVTSWGKEIEPKNVMNRLCEEERYMRNNCGLH 60

Query: 61  HILSNLCSFLLPNHFLSSLELYGCACAWYSIAVRLAMELEVLDANYLSKLNKNFRCS 117
           HILSNLCSFLLPNHFLSSLELYGCACAWYSIAVRLAMELEVLDANYLSKLNKNFRCS
Sbjct: 61  HILSNLCSFLLPNHFLSSLELYGCACAWYSIAVRLAMELEVLDANYLSKLNKNFRCS 117

[Close]
BLAST of CsGy3G006385 vs. NCBI nr
Match: KAE8650182.1 (hypothetical protein Csa_009985 [Cucumis sativus])

HSP 1 Score: 199 bits (505), Expect = 5.28e-63
Identity = 97/114 (85.09%), Postives = 105/114 (92.11%), Query Frame = 0 

Query: 1   MKPSSSSAMAIISHSRTSPHINREGTCGRVTSWGKEIEPKNVMNRLCEEERYMRNNCGLH 60
           MKPSSSSAMAIISHSRTSPHINREGTCGRVTSWGKEIEPKNVMNRLCEEERYMRNNCGLH
Sbjct: 1   MKPSSSSAMAIISHSRTSPHINREGTCGRVTSWGKEIEPKNVMNRLCEEERYMRNNCGLH 60

Query: 61  HILSNLCSFLLPNHFLSSLELYGCACAWYSIAVRLAMELEVLDANY-LSKLNKN 113
           HILSNLCSFLLPNHFLSSLELYGCACAWYSIAV  + + E++  +Y +  +NK+
Sbjct: 61  HILSNLCSFLLPNHFLSSLELYGCACAWYSIAV--SGKCELVRVSYGIGNVNKD 112

[Close]
BLAST of CsGy3G006385 vs. NCBI nr
Match: XP_022136451.1 (uncharacterized protein LOC111008157 isoform X2 [Momordica charantia])

HSP 1 Score: 100 bits (249), Expect = 6.51e-25
Identity = 50/73 (68.49%), Postives = 53/73 (72.60%), Query Frame = 0 

Query: 29  RVTSWGKEIEPKNVMNRLCEEERYMRNNCGLHHILSNLCSFLLPNHFLSSLELYGCACAW 88
           R    GK  E  NVM RL EEERYMRNNCGLHHILS LCSFL P HFLSSLE YGCA  W
Sbjct: 11  RAKEGGKRTEATNVMKRLFEEERYMRNNCGLHHILSYLCSFLPPTHFLSSLESYGCA--W 70

Query: 89  YSIAVRLAMELEV 101
           YSIAVR   + ++
Sbjct: 71  YSIAVRARNQQQI 81

[Close]
BLAST of CsGy3G006385 vs. ExPASy TrEMBL
Match: A0A6J1C3J3 (uncharacterized protein LOC111008157 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008157 PE=4 SV=1)

HSP 1 Score: 100 bits (249), Expect = 3.15e-25
Identity = 50/73 (68.49%), Postives = 53/73 (72.60%), Query Frame = 0 

Query: 29  RVTSWGKEIEPKNVMNRLCEEERYMRNNCGLHHILSNLCSFLLPNHFLSSLELYGCACAW 88
           R    GK  E  NVM RL EEERYMRNNCGLHHILS LCSFL P HFLSSLE YGCA  W
Sbjct: 11  RAKEGGKRTEATNVMKRLFEEERYMRNNCGLHHILSYLCSFLPPTHFLSSLESYGCA--W 70

Query: 89  YSIAVRLAMELEV 101
           YSIAVR   + ++
Sbjct: 71  YSIAVRARNQQQI 81

The following BLAST results are available for this feature:
BLAST of CsGy3G006385 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G006385 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031739301.11.05e-81100.00uncharacterized protein LOC101206733 isoform X2 [Cucumis sativus][more]
KAE8650182.15.28e-6385.09hypothetical protein Csa_009985 [Cucumis sativus][more]
XP_022136451.16.51e-2568.49uncharacterized protein LOC111008157 isoform X2 [Momordica charantia][more]
BLAST of CsGy3G006385 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C3J33.15e-2568.49uncharacterized protein LOC111008157 isoform X2 OS=Momordica charantia OX=3673 G... [more]
BLAST of CsGy3G006385 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G006385.1CsGy3G006385.1mRNA