CsGy3G000920 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G000920
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 667771 .. 668165 (-)
RNA-Seq ExpressionCsGy3G000920
SyntenyCsGy3G000920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCGCCAATGGCGCTTCGCCTCGAGGAGACATTAAACAAACTCAAAGCATTTCTTCGTCTCTGCCTCCTTCTCCGACGACGCTCCATCTACCGGACACGAAATGTCTTGGAAGATGATCAAACCGCGAGAAACCTTGAACGTGATTCGAGTTCTAGGTATGAGAGCTGTGAAGAATTTGAAGACGATGTGGATCACCGAGCGGAGATCTTCATCGAGAATTTTCGTCGTCAATTGAGGTTAGAAAGACAAATTTCTTTGCAATTGAGGTTGTATGGAGTTAATAATAATAGCTTTGAAACAGATTATGAAGAAATATTGCCGCCACCACCACCTCCACCGCCGATTGTATGAATGAATTTCTTGTTGAAATTGAACCGAAGTGCTGTTGA

mRNA sequence

ATGGAGTCGCCAATGGCGCTTCGCCTCGAGGAGACATTAAACAAACTCAAAGCATTTCTTCGTCTCTGCCTCCTTCTCCGACGACGCTCCATCTACCGGACACGAAATGTCTTGGAAGATGATCAAACCGCGAGAAACCTTGAACGTGATTCGAGTTCTAGGTATGAGAGCTGTGAAGAATTTGAAGACGATGTGGATCACCGAGCGGAGATCTTCATCGAGAATTTTCGTCGTCAATTGAGAAATATTGCCGCCACCACCACCTCCACCGCCGATTGTATGAATGAATTTCTTGTTGAAATTGAACCGAAGTGCTGTTGA

Coding sequence (CDS)

ATGGAGTCGCCAATGGCGCTTCGCCTCGAGGAGACATTAAACAAACTCAAAGCATTTCTTCGTCTCTGCCTCCTTCTCCGACGACGCTCCATCTACCGGACACGAAATGTCTTGGAAGATGATCAAACCGCGAGAAACCTTGAACGTGATTCGAGTTCTAGGTATGAGAGCTGTGAAGAATTTGAAGACGATGTGGATCACCGAGCGGAGATCTTCATCGAGAATTTTCGTCGTCAATTGAGAAATATTGCCGCCACCACCACCTCCACCGCCGATTGTATGAATGAATTTCTTGTTGAAATTGAACCGAAGTGCTGTTGA

Protein sequence

MESPMALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDDQTARNLERDSSSRYESCEEFEDDVDHRAEIFIENFRRQLRNIAATTTSTADCMNEFLVEIEPKCC*
Homology
BLAST of CsGy3G000920 vs. NCBI nr
Match: XP_031739290.1 (uncharacterized protein LOC116402928 [Cucumis sativus])

HSP 1 Score: 153 bits (386), Expect = 1.35e-45
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0

Query: 1  MESPMALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDDQTARNLERDSSSRYESCEE 60
          MESPMALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDDQTARNLERDSSSRYESCEE
Sbjct: 1  MESPMALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDDQTARNLERDSSSRYESCEE 60

Query: 61 FEDDVDHRAEIFIENFRRQLR 81
          FEDDVDHRAEIFIENFRRQLR
Sbjct: 61 FEDDVDHRAEIFIENFRRQLR 81

BLAST of CsGy3G000920 vs. NCBI nr
Match: KAE8650012.1 (hypothetical protein Csa_009473 [Cucumis sativus])

HSP 1 Score: 153 bits (386), Expect = 5.66e-44
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0

Query: 1   MESPMALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDDQTARNLERDSSSRYESCEE 60
           MESPMALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDDQTARNLERDSSSRYESCEE
Sbjct: 126 MESPMALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDDQTARNLERDSSSRYESCEE 185

Query: 61  FEDDVDHRAEIFIENFRRQLR 81
           FEDDVDHRAEIFIENFRRQLR
Sbjct: 186 FEDDVDHRAEIFIENFRRQLR 206

BLAST of CsGy3G000920 vs. NCBI nr
Match: KAA0052985.1 (hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK11441.1 hypothetical protein E5676_scaffold139G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 65.9 bits (159), Expect = 4.67e-11
Identity = 51/97 (52.58%), Postives = 58/97 (59.79%), Query Frame = 0

Query: 2  ESPMALRLEETLNKLKAFLRLCLLLRRRSI-----------YRTRNVLEDDQT------A 61
          +SPMA RL++ L KL A +RLCL+ RRRS               R VLED         A
Sbjct: 5  KSPMASRLKKALIKLTAVVRLCLVPRRRSQRLGSFDSDDRKVGIRIVLEDQSRIAENSFA 64

Query: 62 RNLERDSSSRYESCEEFEDDVDHRAEIFIENFRRQLR 81
          R LER SSSRY     +E+DVD RAEIFIENFRRQLR
Sbjct: 65 RKLERASSSRYGG---YEEDVDQRAEIFIENFRRQLR 98

BLAST of CsGy3G000920 vs. NCBI nr
Match: XP_011652707.1 (uncharacterized protein LOC105435054 [Cucumis sativus])

HSP 1 Score: 62.8 bits (151), Expect = 6.44e-10
Identity = 50/95 (52.63%), Postives = 55/95 (57.89%), Query Frame = 0

Query: 5  MALRLEETLNKLKAFLRLCLLLRRRSI------------YRTRNVLEDDQT------ARN 64
          MA RL++ L KLKA LRLCLL R+RS                R VLED          R 
Sbjct: 1  MASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIAESSFVRK 60

Query: 65 LERDSSSRYESCEEFEDDVDHRAEIFIENFRRQLR 81
          LER SSSRY     +E+DVD RAEIFIENFRRQLR
Sbjct: 61 LERASSSRYGG---YEEDVDQRAEIFIENFRRQLR 92

BLAST of CsGy3G000920 vs. NCBI nr
Match: KAG7015798.1 (hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 56.6 bits (135), Expect = 1.86e-07
Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 0

Query: 3  SPMALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDDQTA-----------------R 62
          +P+ LR+++ L KL AF+RLC + R  S  R R+   D +TA                 R
Sbjct: 6  TPVVLRMKKALTKLTAFVRLCHVFRPPS-RRMRSFDSDGRTAGLRSILGDESIVEKCSVR 65

Query: 63 NLERDSSSRYESCEEFEDDVDHRAEIFIENFRRQL 80
           LER  SSR  SCE   DDVD RA+IFI+NFRRQL
Sbjct: 66 KLERGESSRNGSCE---DDVDQRAQIFIDNFRRQL 96

BLAST of CsGy3G000920 vs. ExPASy TrEMBL
Match: A0A0A0L6A3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004520 PE=4 SV=1)

HSP 1 Score: 145 bits (365), Expect = 9.14e-43
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0

Query: 5  MALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDDQTARNLERDSSSRYESCEEFEDD 64
          MALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDDQTARNLERDSSSRYESCEEFEDD
Sbjct: 1  MALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDDQTARNLERDSSSRYESCEEFEDD 60

Query: 65 VDHRAEIFIENFRRQLR 81
          VDHRAEIFIENFRRQLR
Sbjct: 61 VDHRAEIFIENFRRQLR 77

BLAST of CsGy3G000920 vs. ExPASy TrEMBL
Match: A0A0A0L4Z8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.12e-12
Identity = 52/98 (53.06%), Postives = 58/98 (59.18%), Query Frame = 0

Query: 2  ESPMALRLEETLNKLKAFLRLCLLLRRRSI------------YRTRNVLEDDQT------ 61
          +SPMA RL++ L KLKA LRLCLL R+RS                R VLED         
Sbjct: 5  KSPMASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIAESSF 64

Query: 62 ARNLERDSSSRYESCEEFEDDVDHRAEIFIENFRRQLR 81
           R LER SSSRY     +E+DVD RAEIFIENFRRQLR
Sbjct: 65 VRKLERASSSRYGG---YEEDVDQRAEIFIENFRRQLR 99

BLAST of CsGy3G000920 vs. ExPASy TrEMBL
Match: A0A5D3CHZ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00970 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.26e-11
Identity = 51/97 (52.58%), Postives = 58/97 (59.79%), Query Frame = 0

Query: 2  ESPMALRLEETLNKLKAFLRLCLLLRRRSI-----------YRTRNVLEDDQT------A 61
          +SPMA RL++ L KL A +RLCL+ RRRS               R VLED         A
Sbjct: 5  KSPMASRLKKALIKLTAVVRLCLVPRRRSQRLGSFDSDDRKVGIRIVLEDQSRIAENSFA 64

Query: 62 RNLERDSSSRYESCEEFEDDVDHRAEIFIENFRRQLR 81
          R LER SSSRY     +E+DVD RAEIFIENFRRQLR
Sbjct: 65 RKLERASSSRYGG---YEEDVDQRAEIFIENFRRQLR 98

BLAST of CsGy3G000920 vs. ExPASy TrEMBL
Match: A0A6J1CW64 (uncharacterized protein LOC111014780 OS=Momordica charantia OX=3673 GN=LOC111014780 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 9.55e-04
Identity = 41/100 (41.00%), Postives = 55/100 (55.00%), Query Frame = 0

Query: 2   ESPMALRLEETLNKLKAFLRLCL---LLRRRSIYRTRNV------------LEDDQTARN 61
           +SP+  RL++ + K+ A LRL L   L RRR   R R+             LED++   N
Sbjct: 5   KSPLMPRLKKAVRKITALLRLNLSLCLARRRPSGRLRSFSFSDRTVGLRSFLEDEEIGEN 64

Query: 62  -----LERDSSSRYESCEEFEDDVDHRAEIFIENFRRQLR 81
                LER SS RY + E   DDVD R++IFI+NF R+LR
Sbjct: 65  CSMRRLERASSLRYGNAE---DDVDKRSQIFIDNFLRRLR 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_031739290.11.35e-45100.00uncharacterized protein LOC116402928 [Cucumis sativus][more]
KAE8650012.15.66e-44100.00hypothetical protein Csa_009473 [Cucumis sativus][more]
KAA0052985.14.67e-1152.58hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK1144... [more]
XP_011652707.16.44e-1052.63uncharacterized protein LOC105435054 [Cucumis sativus][more]
KAG7015798.11.86e-0745.26hypothetical protein SDJN02_23436, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
A0A0A0L6A39.14e-43100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004520 PE=4 SV=1[more]
A0A0A0L4Z84.12e-1253.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1[more]
A0A5D3CHZ52.26e-1152.58Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CW649.55e-0441.00uncharacterized protein LOC111014780 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 62..81
e-value: 4.4E-5
score: 22.9

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G000920.2CsGy3G000920.2mRNA