CsGy2G026000 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGCTCTCAGGAACGCCGTCGTCACTCACAAGAAACCCAACCCACAGTAATCTTCTCCTTCTTCACGATGATTTTCAGCGTCTTCTTTTTGCTTTTCATCTTCAATAAGTTATTACATTCTTTTGTTTCCATTTTTTTTATGTAAGTTTTTGCATCCTGTATGGTTCGTTTCCTTTCTTCAACTTTGATTCTATGCAATTTTCATCTCTCTATTTTTTCTCTTCTTATGCTTTCATTTTTCTTTCTAATTTATTTTTATTTTCTTTTGTAATGTTTCGCCTCTTTGTTTGTTCCTAACCGAGTTGAATTTTACAGCCTGCGTTGTGTACTTCTTGTATGTTTTTAATAGTTTTGCTTTCCTATTACGCAAGGTTTCTTCATTTCTCTGCATACCTGAACTACTCTAATGATATTATTCATTTACTCTGTATTTTAACTCTTTTAGTTTTCCTACGTTTTTGGCTATAATACTAAATTGAATATACTCCTAAAGCTTTTATCATTGATCCGCTTTTTGAAGGAAGCTGAAGCAGAGAAAAGCTGAAATGAAATCCACGAAAAGCAAGAAGAAAGATCAAAATGCTCCAAAACGTCCAGCTACGACATTCTTCGTTTTCATGTAAGTACAGTTTATAATTGAGGCTGCTTCCGTTTTGAAAGTCGTTCATACATTCTAGTTTTCATTAGATTTTTCCATTCTGATTTCGAGTTCTTGCTTGGGAAATGATAGGGAGGAATTTAGAAAGACGTACAAGGAGCAATTTCCTGATGCAAAAGCTGGTCCAGTGGTAAGATCTTATACTGTTGTTTTGATCAGCATTACTTTCTTATTATTCCTCCATATTTATGTTTTTAGATATGGCTGAGTGGAGGATCGGAGGACTTCTTGAGTTAGCTAGATTTTGTTATTTGCGTTTAACTGTGTTTTGTTAATTTGCAGGTCGGCAAAGTTGGTGGTGAGAAATGGAAGTCCATGTCTGATGCTGTAAGACTCTCTTATTTTCGTACTATTTTCATAGAACACTAATTGGAGACTATCAACAATAAATGACTAAGGAATAAGATCGGAGGTTATCAGTTCTTCCACTTTAATTGAAGATCGTTTCACGTTTTGTTCTCAGTATTCAATTCGAGACTAATTGATGATACAAATCTGTGGTAATCGTGTCTCTTCCTCAGGAAAAAGCTCCGTATGCTGAAAAAGCTTTGAAAAGAAAGGCAGAGTATGAAATAGCTCTTGAAGCATACAAGAACAACCTCGTAATTAAATTGTTCCCACTCTATCTCTACTTTCACTCTTTCTCCTTCACTTCGTCAGAAGATGATCACCACGGTTTTATTGATCATCGAATCTCTCTTCTCTCTAACATCTCATGGTTCACAGAATTGCCCTCAGAATCACAGAATGCCAACAGAATCACAGAAATCAACCTCTGA ATGAGAGCTCTCAGGAACGCCGTCGTCACTCACAAGAAACCCAACCCACAGAAGCTGAAGCAGAGAAAAGCTGAAATGAAATCCACGAAAAGCAAGAAGAAAGATCAAAATGCTCCAAAACGTCCAGCTACGACATTCTTCGTTTTCATGGAGGAATTTAGAAAGACGTACAAGGAGCAATTTCCTGATGCAAAAGCTGGTCCAGTGGTCGGCAAAGTTGGTGGTGAGAAATGGAAGTCCATGTCTGATGCTGAAAAAGCTCCGTATGCTGAAAAAGCTTTGAAAAGAAAGGCAGAGTATGAAATAGCTCTTGAAGCATACAAGAACAACCTCGTAATTAAATTGTTCCCACTCTATCTCTACTTTCACTCTTTCTCCTTCACTTCGTCAGAAGATGATCACCACGGTTTTATTGATCATCGAATCTCTCTTCTCTCTAACATCTCATGGTTCACAGAATTGCCCTCAGAATCACAGAATGCCAACAGAATCACAGAAATCAACCTCTGA ATGAGAGCTCTCAGGAACGCCGTCGTCACTCACAAGAAACCCAACCCACAGAAGCTGAAGCAGAGAAAAGCTGAAATGAAATCCACGAAAAGCAAGAAGAAAGATCAAAATGCTCCAAAACGTCCAGCTACGACATTCTTCGTTTTCATGGAGGAATTTAGAAAGACGTACAAGGAGCAATTTCCTGATGCAAAAGCTGGTCCAGTGGTCGGCAAAGTTGGTGGTGAGAAATGGAAGTCCATGTCTGATGCTGAAAAAGCTCCGTATGCTGAAAAAGCTTTGAAAAGAAAGGCAGAGTATGAAATAGCTCTTGAAGCATACAAGAACAACCTCGTAATTAAATTGTTCCCACTCTATCTCTACTTTCACTCTTTCTCCTTCACTTCGTCAGAAGATGATCACCACGGTTTTATTGATCATCGAATCTCTCTTCTCTCTAACATCTCATGGTTCACAGAATTGCCCTCAGAATCACAGAATGCCAACAGAATCACAGAAATCAACCTCTGA MRALRNAVVTHKKPNPQKLKQRKAEMKSTKSKKKDQNAPKRPATTFFVFMEEFRKTYKEQFPDAKAGPVVGKVGGEKWKSMSDAEKAPYAEKALKRKAEYEIALEAYKNNLVIKLFPLYLYFHSFSFTSSEDDHHGFIDHRISLLSNISWFTELPSESQNANRITEINL* Homology
BLAST of CsGy2G026000 vs. ExPASy Swiss-Prot
Match: O49595 (High mobility group B protein 1 OS=Arabidopsis thaliana OX=3702 GN=HMGB1 PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21 Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of CsGy2G026000 vs. ExPASy Swiss-Prot
Match: P93047 (High mobility group B protein 3 OS=Arabidopsis thaliana OX=3702 GN=HMGB3 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 8.5e-21 Identity = 54/94 (57.45%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of CsGy2G026000 vs. ExPASy Swiss-Prot
Match: P40619 (HMG1/2-like protein OS=Ipomoea nil OX=35883 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.5e-20 Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 0
BLAST of CsGy2G026000 vs. ExPASy Swiss-Prot
Match: O49596 (High mobility group B protein 2 OS=Arabidopsis thaliana OX=3702 GN=HMGB2 PE=1 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 6.1e-19 Identity = 47/82 (57.32%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of CsGy2G026000 vs. ExPASy Swiss-Prot
Match: P40620 (HMG1/2-like protein OS=Vicia faba OX=3906 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 5.2e-18 Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 0
BLAST of CsGy2G026000 vs. NCBI nr
Match: XP_011650215.2 (high mobility group B protein 3-like isoform X1 [Cucumis sativus] >KAE8652290.1 hypothetical protein Csa_021885 [Cucumis sativus]) HSP 1 Score: 327 bits (839), Expect = 8.40e-113 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
BLAST of CsGy2G026000 vs. NCBI nr
Match: XP_031737208.1 (high mobility group B protein 3-like isoform X2 [Cucumis sativus]) HSP 1 Score: 212 bits (540), Expect = 1.23e-67 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CsGy2G026000 vs. NCBI nr
Match: XP_008455870.1 (PREDICTED: high mobility group B protein 1-like isoform X2 [Cucumis melo]) HSP 1 Score: 198 bits (503), Expect = 6.00e-62 Identity = 104/110 (94.55%), Postives = 105/110 (95.45%), Query Frame = 0
BLAST of CsGy2G026000 vs. NCBI nr
Match: XP_008455869.1 (PREDICTED: HMG1/2-like protein isoform X1 [Cucumis melo]) HSP 1 Score: 191 bits (484), Expect = 6.03e-59 Identity = 104/118 (88.14%), Postives = 105/118 (88.98%), Query Frame = 0
BLAST of CsGy2G026000 vs. NCBI nr
Match: KAG6604859.1 (High mobility group B protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 181 bits (459), Expect = 6.75e-55 Identity = 97/121 (80.17%), Postives = 104/121 (85.95%), Query Frame = 0
BLAST of CsGy2G026000 vs. ExPASy TrEMBL
Match: A0A1S3C2L9 (high mobility group B protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495957 PE=3 SV=1) HSP 1 Score: 198 bits (503), Expect = 2.90e-62 Identity = 104/110 (94.55%), Postives = 105/110 (95.45%), Query Frame = 0
BLAST of CsGy2G026000 vs. ExPASy TrEMBL
Match: A0A1S3C1W5 (HMG1/2-like protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495957 PE=3 SV=1) HSP 1 Score: 191 bits (484), Expect = 2.92e-59 Identity = 104/118 (88.14%), Postives = 105/118 (88.98%), Query Frame = 0
BLAST of CsGy2G026000 vs. ExPASy TrEMBL
Match: A0A6J1I4V5 (high mobility group B protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111469891 PE=3 SV=1) HSP 1 Score: 177 bits (449), Expect = 5.19e-54 Identity = 94/114 (82.46%), Postives = 101/114 (88.60%), Query Frame = 0
BLAST of CsGy2G026000 vs. ExPASy TrEMBL
Match: A0A6J1G5W3 (high mobility group B protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111451070 PE=3 SV=1) HSP 1 Score: 177 bits (449), Expect = 5.19e-54 Identity = 94/114 (82.46%), Postives = 101/114 (88.60%), Query Frame = 0
BLAST of CsGy2G026000 vs. ExPASy TrEMBL
Match: A0A6J1CIL2 (high mobility group B protein 3-like OS=Momordica charantia OX=3673 GN=LOC111011298 PE=3 SV=1) HSP 1 Score: 170 bits (431), Expect = 2.65e-51 Identity = 91/114 (79.82%), Postives = 97/114 (85.09%), Query Frame = 0
BLAST of CsGy2G026000 vs. TAIR 10
Match: AT1G20696.2 (high mobility group B3 ) HSP 1 Score: 105.9 bits (263), Expect = 3.2e-23 Identity = 57/98 (58.16%), Postives = 66/98 (67.35%), Query Frame = 0
BLAST of CsGy2G026000 vs. TAIR 10
Match: AT3G51880.1 (high mobility group B1 ) HSP 1 Score: 104.4 bits (259), Expect = 9.4e-23 Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of CsGy2G026000 vs. TAIR 10
Match: AT3G51880.2 (high mobility group B1 ) HSP 1 Score: 104.4 bits (259), Expect = 9.4e-23 Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of CsGy2G026000 vs. TAIR 10
Match: AT3G51880.3 (high mobility group B1 ) HSP 1 Score: 104.4 bits (259), Expect = 9.4e-23 Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of CsGy2G026000 vs. TAIR 10
Match: AT3G51880.4 (high mobility group B1 ) HSP 1 Score: 104.4 bits (259), Expect = 9.4e-23 Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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