CsGy2G024020 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAAAAGGAATTTACCGTATAAATATATTGTTTTAAATAAACGCTGAAGAATATTGGAGAGGGGTTTGGGCAAAACCTCTCGGAACCCTAGAACGTGAAGTCGGAGGCATCGTCGGTCGGCAACAGAGGAGAGTGAAGATGATCATTCCAGTTCGTTGCTTCACTTGCGGAAAGGTTAGCGATGGAGAACTATCTTCAATTTTTGAGTTTAAAATTGCGATTTCCTGTTCTTCATGTCGTCTGTGCCACTGTTTTTCCGATTGCTTGCACACGAGAACAATATACTTTTCATTTAGTCTCAACTTCTTATTGTGATTTGGTTTATATTTTTTCAGGTGATTGGAAACAAATGGGATCATTACCTTGATCTTCTGCAGGCAGATTATTCAGAAGGGTAAGGAAGCAACACCACTGTTGTTCTTCCTTTTCTTCTTCTTCTTCTTATTATTATTTTATGATTGATTGCTAGTAAACAAAACTATACCCTTTTCTCTTGTATCAGTGATGCACTTGATGCTTTGGGTTTGGTTCGCTACTGCTGTAGGCGAATGCTCATGACTCATGTTGACCTTATTGAGAAGCTTCTTAATTACAACAGTAATCCCTCTCTTTCTCTCTCTTTTTATTCATTCATGCTTGAGTTGTTTGATTGTCGACGAACAATTTTGCTGCCCTCTTACGCTTTAATTGCTTTCTGTTTCAGCTCTGGATAAGTCTGATACCAGTTAGCCAAGGGACGAGTTTTCTGATTTTTCACGTGTAGGCGTATTGGCTTTCTGATGGTGTTTGTGTTCAGTTAAGAGTAAAGAAAAACTACCGGAGGGCTCGAGTTAAGCTATGTCTTGGCATTCTAGTTTGTTTAGTTATGGATTCATACGGACTCAAGTACTTGATCTTCTACGTGTTTGTTAGTATTTAGGAGTTGTATATTAGAGCCGTGTAGCATTTTCCATAGATGCAGTTGATTTTCATTCAGGCAGCATTGACGTTTTTGTGGTGTTTGGATCCAGTTAAGAGAAAACAAAATTTATACGATCATGTAGTGCAGGATTTGATTTAAGCTATATCTTAGTGTCCTGGTTTATTTACTTATTGATTCATACGAACCCAAGTATTTAATCTTCTATGTGTTTATTAGGATTTAGGAGTTATATGTAAGAGCCGTGTAGCATTTTCCATAGGATGCAGTCATTCAGTCAGTATTGACTTTTTTGTGGTGTTTGCATTCAGTTAAGAGAAAACAAGAACTATGGGAACATTCAGTTCAGGACTTGAGTTGAGCTATATATTGGTGCCCAGTTTGTTTGCTTATTGATTCATACGAGCCCAAGTATTTAGTCTTGTATGTGTTTATTAGTTTTTAGGAGTACTGTAAGGTGTATTCTACTTTAAGGATGTAATTACTTTGGTTATTGATTTCCATTCAGTTATCGTTTGACGTATGGATGGTCTTTGCATCCAGCTAAGAGAAAAGGAAAAGTATAGCAATATGTAATTGTAGAACTTGGTGTCCCAATTTGTTTACCTATTGATCCATACGAACCAAAGTATTTTATCTTCTGTGTTTTTTTTTAGTTTTTAGTGTTTCTATATGAAATCCGTATGTCATAGGATGTATTGATTTCCTTCAGATGCTATCTAGTCGTTTCTATGGTGTTTGCATTCAGTTTAGAGAAAAGAAAAACTATAGGAATATTCAGTGCAGGACTTAAAGTTGTATCTTGGTGTCCCAGTTTCTTTACTTATTTGAATCATACTAGCCTAAATATTTAATCTTCTATGGATCAATTAGTTTTTAGGAGTTATAAACCTACAGGACTGTGTCCTTCAGTTCTACAGTTTTTTCGAGTACTACAAACCATTTTTGCATGGTGTAGTTAGTTGTGCTTGGAAGGATTTTTGTTCACTTAAGTGGCTGTGGATTGCTGTCCTTGTCTGTATTATTGTATCTACAATTATCAGATGTGTTTGTGTTGTGTCAGTTTCTCACTTTCAATTAATGGAAATGAAAGTAAATTGATAATGGTATAAAGGATGGTGTTTTCTCGGTGGTGTGGTTTTGATATGATGTTTGACTTAGAAATGATCTTTAGACTAATTAGGACTCACTGTTTTTCTTTTCCGTTCAAGAACTATGTGGGAGTGGAGATTGGGATTGAACCGTTGATCTCTAAGAATAGAGGCTAATATCGCTTTCATAAATTGCATGCATTTGTGTGGTAAATTGTGTCATATACAGTAAACTAAAGTGACTTACCAAGGATGTCAATTGAGATAAAATTATTTTTGCTATTTTCAAAGTCACTTTAAAAATTATTTGTCCTTCAAAGCCAATTTGGCTTTTTAAATAGTATGAAAATTACAAAATTGATTTTGAGT GTAAAAGGAATTTACCGTATAAATATATTGTTTTAAATAAACGCTGAAGAATATTGGAGAGGGGTTTGGGCAAAACCTCTCGGAACCCTAGAACGTGAAGTCGGAGGCATCGTCGGTCGGCAACAGAGGAGAGTGAAGATGATCATTCCAGTTCGTTGCTTCACTTGCGGAAAGGTGATTGGAAACAAATGGGATCATTACCTTGATCTTCTGCAGGCAGATTATTCAGAAGGTGATGCACTTGATGCTTTGGGTTTGGTTCGCTACTGCTGTAGGCGAATGCTCATGACTCATGTTGACCTTATTGAGAAGCTTCTTAATTACAACAGTAATCCCTCTCTTTCTCTCTCTTTTTATTCATTCATGCTTGAGTTGTTTGATTGTCGACGAACAATTTTGCTGCCCTCTTACGCTTTAATTGCTTTCTGTTTCAGCTCTGGATAAGTCTGATACCAGTTAGCCAAGGGACGAGTTTTCTGATTTTTCACGTGTAGGCGTATTGGCTTTCTGATGGTGTTTGTGTTCAGTTAAGAGTAAAGAAAAACTACCGGAGGGCTCGAGTTAAGCTATGTCTTGGCATTCTAGTTTGTTTAGTTATGGATTCATACGGACTCAAGTACTTGATCTTCTACGTGTTTGTTAGTATTTAGGAGTTGTATATTAGAGCCGTGTAGCATTTTCCATAGATGCAGTTGATTTTCATTCAGGCAGCATTGACGTTTTTGTGGTGTTTGGATCCAGTTAAGAGAAAACAAAATTTATACGATCATGTAGTGCAGGATTTGATTTAAGCTATATCTTAGTGTCCTGGTTTATTTACTTATTGATTCATACGAACCCAAGTATTTAATCTTCTATGTGTTTATTAGGATTTAGGAGTTATATGTAAGAGCCGTGTAGCATTTTCCATAGGATGCAGTCATTCAGTCAGTATTGACTTTTTTGTGGTGTTTGCATTCAGTTAAGAGAAAACAAGAACTATGGGAACATTCAGTTCAGGACTTGAGTTGAGCTATATATTGGTGCCCAGTTTGTTTGCTTATTGATTCATACGAGCCCAAGTATTTAGTCTTGTATGTGTTTATTAGTTTTTAGGAGTACTGTAAGGTGTATTCTACTTTAAGGATGTAATTACTTTGGTTATTGATTTCCATTCAGTTATCGTTTGACGTATGGATGGTCTTTGCATCCAGCTAAGAGAAAAGGAAAAGTATAGCAATATGTAATTGTAGAACTTGGTGTCCCAATTTGTTTACCTATTGATCCATACGAACCAAAGTATTTTATCTTCTGTGTTTTTTTTTAGTTTTTAGTGTTTCTATATGAAATCCGTATGTCATAGGATGTATTGATTTCCTTCAGATGCTATCTAGTCGTTTCTATGGTGTTTGCATTCAGTTTAGAGAAAAGAAAAACTATAGGAATATTCAGTGCAGGACTTAAAGTTGTATCTTGGTGTCCCAGTTTCTTTACTTATTTGAATCATACTAGCCTAAATATTTAATCTTCTATGGATCAATTAGTTTTTAGGAGTTATAAACCTACAGGACTGTGTCCTTCAGTTCTACAGTTTTTTCGAGTACTACAAACCATTTTTGCATGGTGTAGTTAGTTGTGCTTGGAAGGATTTTTGTTCACTTAAGTGGCTGTGGATTGCTGTCCTTGTCTGTATTATTGTATCTACAATTATCAGATGTGTTTGTGTTGTGTCAGTTTCTCACTTTCAATTAATGGAAATGAAAGTAAATTGATAATGGTATAAAGGATGGTGTTTTCTCGGTGGTGTGGTTTTGATATGATGTTTGACTTAGAAATGATCTTTAGACTAATTAGGACTCACTGTTTTTCTTTTCCGTTCAAGAACTATGTGGGAGTGGAGATTGGGATTGAACCGTTGATCTCTAAGAATAGAGGCTAATATCGCTTTCATAAATTGCATGCATTTGTGTGGTAAATTGTGTCATATACAGTAAACTAAAGTGACTTACCAAGGATGTCAATTGAGATAAAATTATTTTTGCTATTTTCAAAGTCACTTTAAAAATTATTTGTCCTTCAAAGCCAATTTGGCTTTTTAAATAGTATGAAAATTACAAAATTGATTTTGAGT ATGATCATTCCAGTTCGTTGCTTCACTTGCGGAAAGGTGATTGGAAACAAATGGGATCATTACCTTGATCTTCTGCAGGCAGATTATTCAGAAGGTGATGCACTTGATGCTTTGGGTTTGGTTCGCTACTGCTGTAGGCGAATGCTCATGACTCATGTTGACCTTATTGAGAAGCTTCTTAATTACAACAGTAATCCCTCTCTTTCTCTCTCTTTTTATTCATTCATGCTTGAGTTGTTTGATTGTCGACGAACAATTTTGCTGCCCTCTTACGCTTTAATTGCTTTCTGTTTCAGCTCTGGATAA MIIPVRCFTCGKVIGNKWDHYLDLLQADYSEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNSNPSLSLSFYSFMLELFDCRRTILLPSYALIAFCFSSG* Homology
BLAST of CsGy2G024020 vs. ExPASy Swiss-Prot
Match: Q9SYA6 (DNA-directed RNA polymerase subunit 10-like protein OS=Arabidopsis thaliana OX=3702 GN=NRPB10L PE=1 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.2e-30 Identity = 59/64 (92.19%), Postives = 63/64 (98.44%), Query Frame = 0
BLAST of CsGy2G024020 vs. ExPASy Swiss-Prot
Match: Q8LFJ6 (DNA-directed RNA polymerases II, IV and V subunit 10 OS=Arabidopsis thaliana OX=3702 GN=NRPB10 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 6.0e-30 Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0
BLAST of CsGy2G024020 vs. ExPASy Swiss-Prot
Match: Q39290 (DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Brassica napus OX=3708 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 6.0e-30 Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0
BLAST of CsGy2G024020 vs. ExPASy Swiss-Prot
Match: Q55AB6 (DNA-directed RNA polymerases I, II, and III subunit rpabc5 OS=Dictyostelium discoideum OX=44689 GN=polr2l PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 4.8e-27 Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of CsGy2G024020 vs. ExPASy Swiss-Prot
Match: Q32P78 (DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Bos taurus OX=9913 GN=POLR2L PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 8.2e-27 Identity = 52/62 (83.87%), Postives = 58/62 (93.55%), Query Frame = 0
BLAST of CsGy2G024020 vs. NCBI nr
Match: KAA0057130.1 (DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Cucumis melo var. makuwa] >TYJ97111.1 DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Cucumis melo var. makuwa]) HSP 1 Score: 166 bits (421), Expect = 1.85e-51 Identity = 80/84 (95.24%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of CsGy2G024020 vs. NCBI nr
Match: CDM84745.1 (unnamed protein product [Triticum aestivum]) HSP 1 Score: 145 bits (366), Expect = 2.35e-42 Identity = 68/79 (86.08%), Postives = 72/79 (91.14%), Query Frame = 0
BLAST of CsGy2G024020 vs. NCBI nr
Match: CAF2153035.1 (unnamed protein product, partial [Brassica napus]) HSP 1 Score: 144 bits (362), Expect = 2.80e-42 Identity = 66/81 (81.48%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of CsGy2G024020 vs. NCBI nr
Match: CAG7889275.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 144 bits (362), Expect = 4.29e-42 Identity = 66/81 (81.48%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of CsGy2G024020 vs. NCBI nr
Match: KAF9685616.1 (hypothetical protein SADUNF_Sadunf03G0073100 [Salix dunnii]) HSP 1 Score: 143 bits (361), Expect = 5.07e-42 Identity = 71/87 (81.61%), Postives = 76/87 (87.36%), Query Frame = 0
BLAST of CsGy2G024020 vs. ExPASy TrEMBL
Match: A0A5A7UPU3 (DNA-directed RNA polymerases I, II, and III subunit RPABC5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold371G00170 PE=3 SV=1) HSP 1 Score: 166 bits (421), Expect = 8.94e-52 Identity = 80/84 (95.24%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of CsGy2G024020 vs. ExPASy TrEMBL
Match: A0A077RWJ0 (Uncharacterized protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF057600100CFD_c1 PE=3 SV=1) HSP 1 Score: 145 bits (366), Expect = 1.14e-42 Identity = 68/79 (86.08%), Postives = 72/79 (91.14%), Query Frame = 0
BLAST of CsGy2G024020 vs. ExPASy TrEMBL
Match: A0A5J5BP64 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_020993 PE=3 SV=1) HSP 1 Score: 143 bits (361), Expect = 3.24e-42 Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of CsGy2G024020 vs. ExPASy TrEMBL
Match: A0A540MUX8 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_011823 PE=3 SV=1) HSP 1 Score: 142 bits (359), Expect = 3.44e-42 Identity = 69/77 (89.61%), Postives = 70/77 (90.91%), Query Frame = 0
BLAST of CsGy2G024020 vs. ExPASy TrEMBL
Match: A0A540N402 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_008671 PE=3 SV=1) HSP 1 Score: 142 bits (357), Expect = 5.47e-42 Identity = 66/70 (94.29%), Postives = 67/70 (95.71%), Query Frame = 0
BLAST of CsGy2G024020 vs. TAIR 10
Match: AT1G61700.1 (RNA polymerases N / 8 kDa subunit ) HSP 1 Score: 133.7 bits (335), Expect = 8.6e-32 Identity = 59/64 (92.19%), Postives = 63/64 (98.44%), Query Frame = 0
BLAST of CsGy2G024020 vs. TAIR 10
Match: AT1G11475.1 (RNA polymerases N / 8 kDa subunit ) HSP 1 Score: 131.3 bits (329), Expect = 4.3e-31 Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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