CsGy2G003810 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G003810
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	TMV resistance protein N-like
Location	Gy14Chr2: 2568768 .. 2569256 (-)
RNA-Seq Expression	CsGy2G003810
Synteny	CsGy2G003810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCTAGTCTAGAAGATTTGTGGTTTCAAAGTAGTTCTATAACAAAGCTATCTTCAACAATTAGATATCTTACCAGCCTCAAAGATTTGACCATCGTGGATTGCAAAAAGCTCACTACTCTTCCAAGTACAATTTATGACTTGAGCAAACTTACATCCATAGAAGTCTCACAATCCGATCTTTCAACATTTCCTTCCTCATATTCCTGCCCTTCCTCACTTCCCCTCCTAACAAGATTACACCTTTATGAGAACAAGATAACAAATTTAGATTTTTTGGAAACTATCGCTCATGCTGCTCCATCACTGAGAGAGTTGAACTTGTCTAACAACAACTTTTCTATACTACCTTCATGTATTGTTAATTTTAAATCCTTGAGATTTCTTGAAACATTTGATTGTAAGTTTCTGGAAGAAATTCCAAAGATTCCAGAAGGCTTAATTTCTTTGGGTGCATATCATTGGCCAAATCTCCCGACAACTTAG

mRNA sequence

ATGAAGTCTAGTCTAGAAGATTTGTGGTTTCAAAGTAGTTCTATAACAAAGCTATCTTCAACAATTAGATATCTTACCAGCCTCAAAGATTTGACCATCGTGGATTGCAAAAAGCTCACTACTCTTCCAAGTACAATTTATGACTTGAGCAAACTTACATCCATAGAAGTCTCACAATCCGATCTTTCAACATTTCCTTCCTCATATTCCTGCCCTTCCTCACTTCCCCTCCTAACAAGATTACACCTTTATGAGAACAAGATAACAAATTTAGATTTTTTGGAAACTATCGCTCATGCTGCTCCATCACTGAGAGAGTTGAACTTGTCTAACAACAACTTTTCTATACTACCTTCATGTATTGTTAATTTTAAATCCTTGAGATTTCTTGAAACATTTGATTGTAAGTTTCTGGAAGAAATTCCAAAGATTCCAGAAGGCTTAATTTCTTTGGGTGCATATCATTGGCCAAATCTCCCGACAACTTAG

Coding sequence (CDS)

ATGAAGTCTAGTCTAGAAGATTTGTGGTTTCAAAGTAGTTCTATAACAAAGCTATCTTCAACAATTAGATATCTTACCAGCCTCAAAGATTTGACCATCGTGGATTGCAAAAAGCTCACTACTCTTCCAAGTACAATTTATGACTTGAGCAAACTTACATCCATAGAAGTCTCACAATCCGATCTTTCAACATTTCCTTCCTCATATTCCTGCCCTTCCTCACTTCCCCTCCTAACAAGATTACACCTTTATGAGAACAAGATAACAAATTTAGATTTTTTGGAAACTATCGCTCATGCTGCTCCATCACTGAGAGAGTTGAACTTGTCTAACAACAACTTTTCTATACTACCTTCATGTATTGTTAATTTTAAATCCTTGAGATTTCTTGAAACATTTGATTGTAAGTTTCTGGAAGAAATTCCAAAGATTCCAGAAGGCTTAATTTCTTTGGGTGCATATCATTGGCCAAATCTCCCGACAACTTAG

Protein sequence

MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQSDLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSCIVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT*

Homology

[Close]

BLAST of CsGy2G003810 vs. ExPASy Swiss-Prot
Match: Q40392 (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-07
Identity = 51/168 (30.36%), Postives = 75/168 (44.64%), Query Frame = 0


Query: 8   LWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQSDLSTFPS 67
           L +   ++  L S+I  L SL  L++  C KL +LP  I DL  L   + S + +   PS
Sbjct: 742 LLWNMKNLVALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPS 801

Query: 68  SYSCPSSL-----------------PLLTRLHLYENKITNLDFLETIAHAAP-------S 127
           S    + L                 P+   LH  E    NL +   I    P       S
Sbjct: 802 SIIRLNKLIILMFRGFKDGVHFEFPPVAEGLHSLE--YLNLSYCNLIDGGLPEEIGSLSS 861

Query: 128 LRELNLSNNNFSILPSCIVNFKSLRFLETFDCKFLEEIPKIPEGLISL 152
           L++L+LS NNF  LPS I    +L+ L+  DC+ L ++P++P  L  L
Sbjct: 862 LKKLDLSRNNFEHLPSSIAQLGALQSLDLKDCQRLTQLPELPPELNEL 907

[Close]

BLAST of CsGy2G003810 vs. ExPASy Swiss-Prot
Match: F4JT82 (Probable disease resistance protein At4g19520 OS=Arabidopsis thaliana OX=3702 GN=At4g19520 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.9e-07
Identity = 47/170 (27.65%), Postives = 84/170 (49.41%), Query Frame = 0


Query: 4    SLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQ-SDL 63
            +L +L+   ++I +L  +I  L  L  L + +C +L  LP  +++L+ L  +++S  S+L
Sbjct: 894  NLIELYLAGTAIRELPPSIGDLALLDTLDLKNCNRLRHLPMEMHNLNPLKVLDLSNCSEL 953

Query: 64   STFPSSY-------SCPSSLPLLTRLH-----LYENKIT------NLDFLETIAHAAPSL 123
              F SS          P+ + L ++L       YE+++T       L ++       PSL
Sbjct: 954  EVFTSSLPKVRELRPAPTVMLLRSKLPFCFFIFYEHRVTLSLYKARLQYIPEEIRWMPSL 1013

Query: 124  RELNLSNNNFSILPSCIVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAY 155
            + L+LS N F+ +P  I +F  L  L    C+ L  +P++P  L  L A+
Sbjct: 1014 KTLDLSRNGFTEVPVSIKDFSKLLSLRLRYCENLRSLPQLPRSLQLLNAH 1063

[Close]

BLAST of CsGy2G003810 vs. ExPASy Swiss-Prot
Match: Q4H4B6 (Protein scribble homolog OS=Danio rerio OX=7955 GN=scrib PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-06
Identity = 49/148 (33.11%), Postives = 73/148 (49.32%), Query Frame = 0


Query: 4   SLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQSDLS 63
           SLE   F  + +T+L      L  L  L++ D   L +LP+ I +LS L ++E+ ++ L 
Sbjct: 106 SLEIADFSGNPLTRLPDGFTQLRGLAHLSLNDV-SLQSLPNDIGNLSNLVTLELRENLLK 165

Query: 64  TFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSCIVN 123
                 S PSSL  L +L   +     L+ L     A P+LREL L  N  S LP  + N
Sbjct: 166 ------SLPSSLSFLVKLEQLDLGSNVLEVLPDTLGALPNLRELWLDRNQLSSLPPELGN 225

Query: 124 FKSLRFLETFDCKFLEEIPKIPEGLISL 152
            + L  L+  + + L E+P    GLI+L
Sbjct: 226 LRQLVCLDVSENR-LSELPTEISGLIAL 245

[Close]

BLAST of CsGy2G003810 vs. ExPASy Swiss-Prot
Match: A4D1F6 (Leucine-rich repeat and death domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LRRD1 PE=2 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05
Identity = 43/145 (29.66%), Postives = 70/145 (48.28%), Query Frame = 0


Query: 5   LEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCK--KLTTLPSTIYDLSKLTSIEVSQSDL 64
           ++ L F S+        +  L SL+ L I   K  KLT LP  + ++++L  +++S + +
Sbjct: 604 IQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISNNAI 663

Query: 65  STFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSCIV 124
              P +      L  L  LH Y N+I+   +L     +   L++LNLS NN + LPS I 
Sbjct: 664 REIPRNI---GELRNLVSLHAYNNQIS---YLPPSLLSLNDLQQLNLSGNNLTALPSAIY 723

Query: 125 NFKSLRFLETFDCKFLEEIPKIPEG 148
           N  SL+ +   D   L    +I +G
Sbjct: 724 NIFSLKEINFDDNPLLRPPVEICKG 742

[Close]

BLAST of CsGy2G003810 vs. ExPASy Swiss-Prot
Match: Q6XHA6 (Probable inactive serine/threonine-protein kinase roco10 OS=Dictyostelium discoideum OX=44689 GN=roco10 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-05
Identity = 48/150 (32.00%), Postives = 69/150 (46.00%), Query Frame = 0


Query: 3    SSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQSDL 62
            + L  L  + + +T +   I  L  L+ LT+ D  +++ L S I  L+ LT + ++ + +
Sbjct: 1108 TKLRSLDLRKNHLTSIPEGIINLVELQVLTLAD-NQISHLTSDIQKLTSLTELNLNGNQI 1167

Query: 63   STFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSCIV 122
                   S P  L LLT L         L  + +  H   SL EL L+NNN S LP  IV
Sbjct: 1168 Q------SLPPQLLLLTNLKKLYLDNNQLQSISSAIHRMQSLIELRLTNNNISRLPPGIV 1227

Query: 123  NFKSLRFLETFDCKFLEEIPKIPEGLISLG 153
              K L  LE    K L++   IPE  I  G
Sbjct: 1228 ALKKLNSLELTGNKPLKD--NIPEKYIQKG 1248

[Close]

BLAST of CsGy2G003810 vs. NCBI nr
Match: KAE8651588.1 (hypothetical protein Csa_023485 [Cucumis sativus])

HSP 1 Score: 318 bits (815), Expect = 8.79e-102
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 60
           MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS
Sbjct: 586 MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 645

Query: 61  DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 120
           DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC
Sbjct: 646 DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 705

Query: 121 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT 162
           IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT
Sbjct: 706 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT 747

[Close]

BLAST of CsGy2G003810 vs. NCBI nr
Match: ADU33181.1 (putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus])

HSP 1 Score: 318 bits (815), Expect = 2.10e-101
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 60
           MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS
Sbjct: 625 MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 684

Query: 61  DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 120
           DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC
Sbjct: 685 DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 744

Query: 121 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT 162
           IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT
Sbjct: 745 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT 786

[Close]

BLAST of CsGy2G003810 vs. NCBI nr
Match: ADI99937.1 (TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus])

HSP 1 Score: 318 bits (815), Expect = 5.00e-101
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 60
           MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS
Sbjct: 666 MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 725

Query: 61  DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 120
           DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC
Sbjct: 726 DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 785

Query: 121 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT 162
           IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT
Sbjct: 786 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT 827

[Close]

BLAST of CsGy2G003810 vs. NCBI nr
Match: XP_031737215.1 (TMV resistance protein N isoform X1 [Cucumis sativus])

HSP 1 Score: 318 bits (815), Expect = 1.47e-100
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 60
           MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS
Sbjct: 720 MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 779

Query: 61  DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 120
           DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC
Sbjct: 780 DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 839

Query: 121 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT 162
           IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT
Sbjct: 840 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT 881

[Close]

BLAST of CsGy2G003810 vs. NCBI nr
Match: XP_008465653.2 (PREDICTED: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 284 bits (726), Expect = 2.60e-91
Identity = 148/153 (96.73%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 60
           MKSSLEDLWF SSSIT+LSSTIRYLTSLKDLTI DCKKLTTLPSTIYDLSKLTSIEVSQS
Sbjct: 119 MKSSLEDLWFYSSSITELSSTIRYLTSLKDLTITDCKKLTTLPSTIYDLSKLTSIEVSQS 178

Query: 61  DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 120
           DLSTFPSSYSCPSSLP LTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC
Sbjct: 179 DLSTFPSSYSCPSSLPHLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 238

Query: 121 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGA 153
           IVNFKSLRFLETFDCK LEEIPKIPEGLISLGA
Sbjct: 239 IVNFKSLRFLETFDCKLLEEIPKIPEGLISLGA 271

[Close]

BLAST of CsGy2G003810 vs. ExPASy TrEMBL
Match: E7CHD6 (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 318 bits (815), Expect = 1.01e-101
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 60
           MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS
Sbjct: 625 MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 684

Query: 61  DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 120
           DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC
Sbjct: 685 DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 744

Query: 121 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT 162
           IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT
Sbjct: 745 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT 786

[Close]

BLAST of CsGy2G003810 vs. ExPASy TrEMBL
Match: D9I8I7 (TIR-NBS-LRR-AAA+ATPase class resistance protein OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 318 bits (815), Expect = 2.42e-101
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 60
           MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS
Sbjct: 666 MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 725

Query: 61  DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 120
           DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC
Sbjct: 726 DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 785

Query: 121 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT 162
           IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT
Sbjct: 786 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLPTT 827

[Close]

BLAST of CsGy2G003810 vs. ExPASy TrEMBL
Match: A0A1S3CPD4 (TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103503294 PE=4 SV=1)

HSP 1 Score: 284 bits (726), Expect = 1.26e-91
Identity = 148/153 (96.73%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 60
           MKSSLEDLWF SSSIT+LSSTIRYLTSLKDLTI DCKKLTTLPSTIYDLSKLTSIEVSQS
Sbjct: 119 MKSSLEDLWFYSSSITELSSTIRYLTSLKDLTITDCKKLTTLPSTIYDLSKLTSIEVSQS 178

Query: 61  DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 120
           DLSTFPSSYSCPSSLP LTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC
Sbjct: 179 DLSTFPSSYSCPSSLPHLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 238

Query: 121 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGA 153
           IVNFKSLRFLETFDCK LEEIPKIPEGLISLGA
Sbjct: 239 IVNFKSLRFLETFDCKLLEEIPKIPEGLISLGA 271

[Close]

BLAST of CsGy2G003810 vs. ExPASy TrEMBL
Match: A0A5A7V625 (TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G002110 PE=4 SV=1)

HSP 1 Score: 284 bits (726), Expect = 1.10e-87
Identity = 148/153 (96.73%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 60
           MKSSLEDLWF SSSIT+LSSTIRYLTSLKDLTI DCKKLTTLPSTIYDLSKLTSIEVSQS
Sbjct: 715 MKSSLEDLWFYSSSITELSSTIRYLTSLKDLTITDCKKLTTLPSTIYDLSKLTSIEVSQS 774

Query: 61  DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 120
           DLSTFPSSYSCPSSLP LTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC
Sbjct: 775 DLSTFPSSYSCPSSLPHLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 834

Query: 121 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGA 153
           IVNFKSLRFLETFDCK LEEIPKIPEGLISLGA
Sbjct: 835 IVNFKSLRFLETFDCKLLEEIPKIPEGLISLGA 867

[Close]

BLAST of CsGy2G003810 vs. ExPASy TrEMBL
Match: A0A1S4DZX2 (TMV resistance protein N-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495278 PE=4 SV=1)

HSP 1 Score: 251 bits (641), Expect = 3.43e-75
Identity = 134/153 (87.58%), Postives = 140/153 (91.50%), Query Frame = 0


Query: 1   MKSSLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQS 60
           M+SSLE LWF  SSIT+LSSTIRYLTSLK L+I DCK+LTTLPSTIYDLSKLTSIEVSQS
Sbjct: 720 MESSLEHLWFYRSSITELSSTIRYLTSLKILSITDCKELTTLPSTIYDLSKLTSIEVSQS 779

Query: 61  DLSTFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 120
           DLSTFP SYSCPSSL  LTRL LYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC
Sbjct: 780 DLSTFPFSYSCPSSLLHLTRLDLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSC 839

Query: 121 IVNFKSLRFLETFDCKFLEEIPKIPEGLISLGA 153
           IVNFKSLRFLET DCK L++IPKIPEGLI L A
Sbjct: 840 IVNFKSLRFLETIDCKLLKKIPKIPEGLIYLDA 872

[Close]

BLAST of CsGy2G003810 vs. TAIR 10
Match: AT1G27170.1 (transmembrane receptors;ATP binding )

HSP 1 Score: 58.2 bits (139), Expect = 7.4e-09
Identity = 46/143 (32.17%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 4   SLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQSDLS 63
           SLE L+   +++  L S+I  L +L+DL +V C  L+ +P +I +L  L  + ++ S + 
Sbjct: 812 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 871

Query: 64  TFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHA---APSLRELNLSNNNFSILPSC 123
             P     PSSLP      LY+    +  FL+ +  +     SL +L LS+     LP  
Sbjct: 872 ELPLK---PSSLP-----SLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEE 931

Query: 124 IVNFKSLRFLETFDCKFLEEIPK 144
           I     +R LE  +CKFL+ +PK
Sbjct: 932 IGALHFIRELELRNCKFLKFLPK 946

[Close]

BLAST of CsGy2G003810 vs. TAIR 10
Match: AT1G27170.2 (transmembrane receptors;ATP binding )

HSP 1 Score: 58.2 bits (139), Expect = 7.4e-09
Identity = 46/143 (32.17%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 4   SLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQSDLS 63
           SLE L+   +++  L S+I  L +L+DL +V C  L+ +P +I +L  L  + ++ S + 
Sbjct: 812 SLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKSLKKLFINGSAVE 871

Query: 64  TFPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHA---APSLRELNLSNNNFSILPSC 123
             P     PSSLP      LY+    +  FL+ +  +     SL +L LS+     LP  
Sbjct: 872 ELPLK---PSSLP-----SLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEE 931

Query: 124 IVNFKSLRFLETFDCKFLEEIPK 144
           I     +R LE  +CKFL+ +PK
Sbjct: 932 IGALHFIRELELRNCKFLKFLPK 946

[Close]

BLAST of CsGy2G003810 vs. TAIR 10
Match: AT5G45200.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08
Identity = 55/181 (30.39%), Postives = 82/181 (45.30%), Query Frame = 0


Query: 4   SLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQ-SDL 63
           +LE+L+   ++I +L STI  L  L  L + DCK L +LP +I +L  +  I +S  S L
Sbjct: 753 NLEELYLDGTAIKELPSTIGDLQKLISLKLKDCKNLLSLPDSIGNLKAIQEIILSGCSSL 812

Query: 64  STFPSSYSCPSSLPLLTRLHLYENKITNL-DFLETIA---------------------HA 123
            +FP       +L  L  L L    I  + D L  ++                     + 
Sbjct: 813 ESFP---EVNQNLKHLKTLLLDGTAIKKIPDILHHLSPDQGLTSSQSNCHLCEWPRGIYG 872

Query: 124 APSLRELNLSNNNFSILPSCIVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAYHWPNLP 162
             S+R L+LS+N F ILP  I     L +L+   CK L  +P +P  L  L A+   +L 
Sbjct: 873 LSSVRRLSLSSNEFRILPRSIGYLYHLNWLDLKHCKNLVSVPMLPPNLQWLDAHGCISLE 930

[Close]

BLAST of CsGy2G003810 vs. TAIR 10
Match: AT4G19520.1 (disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-08
Identity = 47/170 (27.65%), Postives = 84/170 (49.41%), Query Frame = 0


Query: 4    SLEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQ-SDL 63
            +L +L+   ++I +L  +I  L  L  L + +C +L  LP  +++L+ L  +++S  S+L
Sbjct: 894  NLIELYLAGTAIRELPPSIGDLALLDTLDLKNCNRLRHLPMEMHNLNPLKVLDLSNCSEL 953

Query: 64   STFPSSY-------SCPSSLPLLTRLH-----LYENKIT------NLDFLETIAHAAPSL 123
              F SS          P+ + L ++L       YE+++T       L ++       PSL
Sbjct: 954  EVFTSSLPKVRELRPAPTVMLLRSKLPFCFFIFYEHRVTLSLYKARLQYIPEEIRWMPSL 1013

Query: 124  RELNLSNNNFSILPSCIVNFKSLRFLETFDCKFLEEIPKIPEGLISLGAY 155
            + L+LS N F+ +P  I +F  L  L    C+ L  +P++P  L  L A+
Sbjct: 1014 KTLDLSRNGFTEVPVSIKDFSKLLSLRLRYCENLRSLPQLPRSLQLLNAH 1063

[Close]

BLAST of CsGy2G003810 vs. TAIR 10
Match: AT1G27180.1 (disease resistance protein (TIR-NBS-LRR class), putative )

HSP 1 Score: 53.5 bits (127), Expect = 1.8e-07
Identity = 43/147 (29.25%), Postives = 73/147 (49.66%), Query Frame = 0


Query: 5    LEDLWFQSSSITKLSSTIRYLTSLKDLTIVDCKKLTTLPSTIYDLSKLTSIEVSQSDLST 64
            L++L    ++I+ L  +I  L  L+ L+++ C+ +  LPS +  L+ L  + +  + L  
Sbjct: 940  LKELLLDGTAISNLPYSIFRLQKLEKLSLMGCRSIEELPSCVGYLTSLEDLYLDDTALRN 999

Query: 65   FPSSYSCPSSLPLLTRLHLYENKITNLDFLETIAHAAPSLRELNLSNNNFSILPSCIVNF 124
             PSS      L  L +LHL   + T+L  +    +   SL+EL ++ +    LP    + 
Sbjct: 1000 LPSSI---GDLKNLQKLHLM--RCTSLSTIPETINKLMSLKELFINGSAVEELPIETGSL 1059

Query: 125  KSLRFLETFDCKFLEEIPKIPEGLISL 152
              L  L   DCKFL+++P    GL SL
Sbjct: 1060 LCLTDLSAGDCKFLKQVPSSIGGLNSL 1081

The following BLAST results are available for this feature:

BLAST of CsGy2G003810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40392	3.0e-07	30.36	TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1	[more]
F4JT82	3.9e-07	27.65	Probable disease resistance protein At4g19520 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q4H4B6	2.0e-06	33.11	Protein scribble homolog OS=Danio rerio OX=7955 GN=scrib PE=1 SV=1	[more]
A4D1F6	1.3e-05	29.66	Leucine-rich repeat and death domain-containing protein 1 OS=Homo sapiens OX=960...	[more]
Q6XHA6	1.7e-05	32.00	Probable inactive serine/threonine-protein kinase roco10 OS=Dictyostelium discoi...	[more]

BLAST of CsGy2G003810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651588.1	8.79e-102	100.00	hypothetical protein Csa_023485 [Cucumis sativus]	[more]
ADU33181.1	2.10e-101	100.00	putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus]	[more]
ADI99937.1	5.00e-101	100.00	TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]	[more]
XP_031737215.1	1.47e-100	100.00	TMV resistance protein N isoform X1 [Cucumis sativus]	[more]
XP_008465653.2	2.60e-91	96.73	PREDICTED: TMV resistance protein N-like [Cucumis melo]	[more]

BLAST of CsGy2G003810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E7CHD6	1.01e-101	100.00	Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus OX=3659 PE=4 SV=1	[more]
D9I8I7	2.42e-101	100.00	TIR-NBS-LRR-AAA+ATPase class resistance protein OS=Cucumis sativus OX=3659 PE=4 ...	[more]
A0A1S3CPD4	1.26e-91	96.73	TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103503294 PE=4 SV=1	[more]
A0A5A7V625	1.10e-87	96.73	TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S4DZX2	3.43e-75	87.58	TMV resistance protein N-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495278...	[more]

BLAST of CsGy2G003810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27170.1	7.4e-09	32.17	transmembrane receptors;ATP binding	[more]
AT1G27170.2	7.4e-09	32.17	transmembrane receptors;ATP binding	[more]
AT5G45200.1	2.1e-08	30.39	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G19520.1	2.8e-08	27.65	disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G27180.1	1.8e-07	29.25	disease resistance protein (TIR-NBS-LRR class), putative	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 2..159 e-value: 3.8E-25 score: 90.1
None	No IPR available	PANTHER	PTHR47186	LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57	coord: 4..143
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 4..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G003810.2	CsGy2G003810.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0007165	signal transduction
cellular_component	GO:0016020	membrane
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0003953	NAD+ nucleosidase activity