Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCAAAGAGAACAAGAAAGAACTAAAGAAGAACAAAAAAGTGATTGTAAAAAACAAAATCCTCCACTAAATTACAACCAATACAAATCAAGAATAAAAAAAACTAAGTGATTCCTTGCAACTAACATGAATCTCTATACTCTCTAGCCTCTTAGACCTCTCCGTCCAAAATTCCTTTACTTATCGCCATTTTCCCTCTCGAACAAACTTCACTTGCTCTTTGCCCATCTCCCATGGGAGCTAATCTCTGCACCATTAGATGCCCGGGGACGGCCGACGCCTCCGGTGACGGTAAGCCCAAAAAACCCTAGTCTGATTTCGGAAATTATGTCCACTGCGATTCTCTCTGTTTTTCTTTTTTTTTTTTTTTTTGAAAAAATAGGGCTCGGATTTGCAGGCTATGAAATCTGCGGGTGGAGAAGGCGACATTGGTGGAGAAGAGAGAGGAACGACGTGAAGAGAGAGTTAGAGGCGTCGATTGAGAAGAAGGAATTCATGTCTCTTGAGGAGTTGCTGTTGGCTTCTCCAGGAGTGCCGTCGGAGCGAGGGTTTGGAAATGACGGAGAGTTTAATGTTTCAAGACATGGGGGATTCAAGAGAAAAGTTCATCCGGCGAGGATTCTGGAGTGTTCTTCGGCTTGTGATGAGAGATCGGGTTTTGTTGGTAAATCGGTTGCAGAGGATGAGTATTCTTCTCATGGCGGTTTTCCGATTTGTGGAAGCCAAAGTGGGAAGTTGAAGAAGAAAGTGAGTTTTAGGCTGCCGGAGGTGTCGGATGTTATTGTTATTCCCTCGCTGGAGGATGATGTGATAGCCGATGAGCGGAATGTTGATTCCTAGTTTATAGTTGGGAAACTATGAACATACCCTCTAAACTTTGTAGTTAAATTTGAAACAACTCTTAAAAAGATTAAGAACAAAATGAAAAAATATTTACTCC
mRNA sequence
GCCAAAGAGAACAAGAAAGAACTAAAGAAGAACAAAAAAGTGATTGTAAAAAACAAAATCCTCCACTAAATTACAACCAATACAAATCAAGAATAAAAAAAACTAAGTGATTCCTTGCAACTAACATGAATCTCTATACTCTCTAGCCTCTTAGACCTCTCCGTCCAAAATTCCTTTACTTATCGCCATTTTCCCTCTCGAACAAACTTCACTTGCTCTTTGCCCATCTCCCATGGGAGCTAATCTCTGCACCATTAGATGCCCGGGGACGGCCGACGCCTCCGGTGACGGCTATGAAATCTGCGGGTGGAGAAGGCGACATTGGTGGAGAAGAGAGAGGAACGACGTGAAGAGAGAGTTAGAGGCGTCGATTGAGAAGAAGGAATTCATGTCTCTTGAGGAGTTGCTGTTGGCTTCTCCAGGAGTGCCGTCGGAGCGAGGGTTTGGAAATGACGGAGAGTTTAATGTTTCAAGACATGGGGGATTCAAGAGAAAAGTTCATCCGGCGAGGATTCTGGAGTGTTCTTCGGCTTGTGATGAGAGATCGGGTTTTGTTGGTAAATCGGTTGCAGAGGATGAGTATTCTTCTCATGGCGGTTTTCCGATTTGTGGAAGCCAAAGTGGGAAGTTGAAGAAGAAAGTGAGTTTTAGGCTGCCGGAGGTGTCGGATGTTATTGTTATTCCCTCGCTGGAGGATGATGTGATAGCCGATGAGCGGAATGTTGATTCCTAGTTTATAGTTGGGAAACTATGAACATACCCTCTAAACTTTGTAGTTAAATTTGAAACAACTCTTAAAAAGATTAAGAACAAAATGAAAAAATATTTACTCC
Coding sequence (CDS)
ATGGGAGCTAATCTCTGCACCATTAGATGCCCGGGGACGGCCGACGCCTCCGGTGACGGCTATGAAATCTGCGGGTGGAGAAGGCGACATTGGTGGAGAAGAGAGAGGAACGACGTGAAGAGAGAGTTAGAGGCGTCGATTGAGAAGAAGGAATTCATGTCTCTTGAGGAGTTGCTGTTGGCTTCTCCAGGAGTGCCGTCGGAGCGAGGGTTTGGAAATGACGGAGAGTTTAATGTTTCAAGACATGGGGGATTCAAGAGAAAAGTTCATCCGGCGAGGATTCTGGAGTGTTCTTCGGCTTGTGATGAGAGATCGGGTTTTGTTGGTAAATCGGTTGCAGAGGATGAGTATTCTTCTCATGGCGGTTTTCCGATTTGTGGAAGCCAAAGTGGGAAGTTGAAGAAGAAAGTGAGTTTTAGGCTGCCGGAGGTGTCGGATGTTATTGTTATTCCCTCGCTGGAGGATGATGTGATAGCCGATGAGCGGAATGTTGATTCCTAG
Protein sequence
MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS*
Homology
BLAST of CsGy1G015730 vs. NCBI nr
Match:
XP_011655111.1 (uncharacterized protein LOC105435481 [Cucumis sativus] >KAE8652878.1 hypothetical protein Csa_013027 [Cucumis sativus])
HSP 1 Score: 342 bits (878), Expect = 7.54e-119
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSLEELLL 60
MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSLEELLL
Sbjct: 1 MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSLEELLL 60
Query: 61 ASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEYSSH 120
ASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEYSSH
Sbjct: 61 ASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEYSSH 120
Query: 121 GGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 166
GGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS
Sbjct: 121 GGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 166
BLAST of CsGy1G015730 vs. NCBI nr
Match:
TYK12357.1 (uncharacterized protein E5676_scaffold302G001340 [Cucumis melo var. makuwa])
HSP 1 Score: 296 bits (759), Expect = 1.17e-100
Identity = 148/167 (88.62%), Postives = 153/167 (91.62%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEKKE---FMSLEE 60
MGANLCTIR P TADASGDGYEICGWRRR WWRRERN+VKRELEASIEKKE FMSLEE
Sbjct: 1 MGANLCTIRRPATADASGDGYEICGWRRRQWWRRERNEVKRELEASIEKKETKEFMSLEE 60
Query: 61 LLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEY 120
LLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SVA+DEY
Sbjct: 61 LLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESVAKDEY 120
Query: 121 SSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNV 164
SSH GFPIC +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV
Sbjct: 121 SSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNV 167
BLAST of CsGy1G015730 vs. NCBI nr
Match:
XP_008458959.1 (PREDICTED: uncharacterized protein LOC103498217 isoform X3 [Cucumis melo])
HSP 1 Score: 296 bits (759), Expect = 4.06e-100
Identity = 148/167 (88.62%), Postives = 153/167 (91.62%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEKKE---FMSLEE 60
MGANLCTIR P TADASGDGYEICGWRRR WWRRERN+VKRELEASIEKKE FMSLEE
Sbjct: 37 MGANLCTIRRPATADASGDGYEICGWRRRQWWRRERNEVKRELEASIEKKETKEFMSLEE 96
Query: 61 LLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEY 120
LLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SVA+DEY
Sbjct: 97 LLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESVAKDEY 156
Query: 121 SSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNV 164
SSH GFPIC +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV
Sbjct: 157 SSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNV 203
BLAST of CsGy1G015730 vs. NCBI nr
Match:
KAA0054321.1 (uncharacterized protein E6C27_scaffold24G00430 [Cucumis melo var. makuwa])
HSP 1 Score: 289 bits (740), Expect = 1.22e-97
Identity = 148/175 (84.57%), Postives = 153/175 (87.43%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDG--------YEICGWRRRHWWRRERNDVKRELEASIEKKE- 60
MGANLCTIR P TADASGDG YEICGWRRR WWRRERN+VKRELEASIEKKE
Sbjct: 1 MGANLCTIRRPATADASGDGKLGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKET 60
Query: 61 --FMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVG 120
FMSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG
Sbjct: 61 KEFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVG 120
Query: 121 KSVAEDEYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNV 164
+SVA+DEYSSH GFPIC +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV
Sbjct: 121 ESVAKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNV 175
BLAST of CsGy1G015730 vs. NCBI nr
Match:
XP_008458958.1 (PREDICTED: uncharacterized protein LOC103498217 isoform X2 [Cucumis melo])
HSP 1 Score: 290 bits (743), Expect = 1.32e-97
Identity = 148/172 (86.05%), Postives = 153/172 (88.95%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDG-----YEICGWRRRHWWRRERNDVKRELEASIEKKE---F 60
MGANLCTIR P TADASGDG YEICGWRRR WWRRERN+VKRELEASIEKKE F
Sbjct: 37 MGANLCTIRRPATADASGDGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKETKEF 96
Query: 61 MSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSV 120
MSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SV
Sbjct: 97 MSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESV 156
Query: 121 AEDEYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNV 164
A+DEYSSH GFPIC +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV
Sbjct: 157 AKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNV 208
BLAST of CsGy1G015730 vs. ExPASy TrEMBL
Match:
A0A0A0LT52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G191690 PE=4 SV=1)
HSP 1 Score: 336 bits (862), Expect = 1.20e-116
Identity = 166/171 (97.08%), Postives = 166/171 (97.08%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDG-----YEICGWRRRHWWRRERNDVKRELEASIEKKEFMSL 60
MGANLCTIRCPGTADASGDG YEICGWRRRHWWRRERNDVKRELEASIEKKEFMSL
Sbjct: 1 MGANLCTIRCPGTADASGDGLGFAGYEICGWRRRHWWRRERNDVKRELEASIEKKEFMSL 60
Query: 61 EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED 120
EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED
Sbjct: 61 EELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAED 120
Query: 121 EYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 166
EYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS
Sbjct: 121 EYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNVDS 171
BLAST of CsGy1G015730 vs. ExPASy TrEMBL
Match:
A0A5D3CKA0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001340 PE=4 SV=1)
HSP 1 Score: 296 bits (759), Expect = 5.67e-101
Identity = 148/167 (88.62%), Postives = 153/167 (91.62%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEKKE---FMSLEE 60
MGANLCTIR P TADASGDGYEICGWRRR WWRRERN+VKRELEASIEKKE FMSLEE
Sbjct: 1 MGANLCTIRRPATADASGDGYEICGWRRRQWWRRERNEVKRELEASIEKKETKEFMSLEE 60
Query: 61 LLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEY 120
LLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SVA+DEY
Sbjct: 61 LLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESVAKDEY 120
Query: 121 SSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNV 164
SSH GFPIC +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV
Sbjct: 121 SSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNV 167
BLAST of CsGy1G015730 vs. ExPASy TrEMBL
Match:
A0A1S3CAA9 (uncharacterized protein LOC103498217 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498217 PE=4 SV=1)
HSP 1 Score: 296 bits (759), Expect = 1.97e-100
Identity = 148/167 (88.62%), Postives = 153/167 (91.62%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDGYEICGWRRRHWWRRERNDVKRELEASIEKKE---FMSLEE 60
MGANLCTIR P TADASGDGYEICGWRRR WWRRERN+VKRELEASIEKKE FMSLEE
Sbjct: 37 MGANLCTIRRPATADASGDGYEICGWRRRQWWRRERNEVKRELEASIEKKETKEFMSLEE 96
Query: 61 LLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSVAEDEY 120
LLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SVA+DEY
Sbjct: 97 LLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESVAKDEY 156
Query: 121 SSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNV 164
SSH GFPIC +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV
Sbjct: 157 SSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNV 203
BLAST of CsGy1G015730 vs. ExPASy TrEMBL
Match:
A0A5A7ULA6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00430 PE=4 SV=1)
HSP 1 Score: 289 bits (740), Expect = 5.89e-98
Identity = 148/175 (84.57%), Postives = 153/175 (87.43%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDG--------YEICGWRRRHWWRRERNDVKRELEASIEKKE- 60
MGANLCTIR P TADASGDG YEICGWRRR WWRRERN+VKRELEASIEKKE
Sbjct: 1 MGANLCTIRRPATADASGDGKLGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKET 60
Query: 61 --FMSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVG 120
FMSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG
Sbjct: 61 KEFMSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVG 120
Query: 121 KSVAEDEYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNV 164
+SVA+DEYSSH GFPIC +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV
Sbjct: 121 ESVAKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNV 175
BLAST of CsGy1G015730 vs. ExPASy TrEMBL
Match:
A0A1S3C9M5 (uncharacterized protein LOC103498217 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498217 PE=4 SV=1)
HSP 1 Score: 290 bits (743), Expect = 6.39e-98
Identity = 148/172 (86.05%), Postives = 153/172 (88.95%), Query Frame = 0
Query: 1 MGANLCTIRCPGTADASGDG-----YEICGWRRRHWWRRERNDVKRELEASIEKKE---F 60
MGANLCTIR P TADASGDG YEICGWRRR WWRRERN+VKRELEASIEKKE F
Sbjct: 37 MGANLCTIRRPATADASGDGLGFAGYEICGWRRRQWWRRERNEVKRELEASIEKKETKEF 96
Query: 61 MSLEELLLASPGVPSERGFGNDGEFNVSRHGGFKRKVHPARILECSSACDERSGFVGKSV 120
MSLEELLLASPG PSERG GNDGEFNVSRHGGFKRKVHPARILE SS CDERSGFVG+SV
Sbjct: 97 MSLEELLLASPGAPSERGEGNDGEFNVSRHGGFKRKVHPARILEWSSVCDERSGFVGESV 156
Query: 121 AEDEYSSHGGFPICGSQSGKLKKKVSFRLPEVSDVIVIPSLEDDVIADERNV 164
A+DEYSSH GFPIC +SGKLKKKVSFRLPEVSDVIVIPSLEDDV AD+RNV
Sbjct: 157 AKDEYSSHSGFPICRRESGKLKKKVSFRLPEVSDVIVIPSLEDDVTADDRNV 208
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_011655111.1 | 7.54e-119 | 100.00 | uncharacterized protein LOC105435481 [Cucumis sativus] >KAE8652878.1 hypothetica... | [more] |
TYK12357.1 | 1.17e-100 | 88.62 | uncharacterized protein E5676_scaffold302G001340 [Cucumis melo var. makuwa] | [more] |
XP_008458959.1 | 4.06e-100 | 88.62 | PREDICTED: uncharacterized protein LOC103498217 isoform X3 [Cucumis melo] | [more] |
KAA0054321.1 | 1.22e-97 | 84.57 | uncharacterized protein E6C27_scaffold24G00430 [Cucumis melo var. makuwa] | [more] |
XP_008458958.1 | 1.32e-97 | 86.05 | PREDICTED: uncharacterized protein LOC103498217 isoform X2 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LT52 | 1.20e-116 | 97.08 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G191690 PE=4 SV=1 | [more] |
A0A5D3CKA0 | 5.67e-101 | 88.62 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3CAA9 | 1.97e-100 | 88.62 | uncharacterized protein LOC103498217 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A5A7ULA6 | 5.89e-98 | 84.57 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3C9M5 | 6.39e-98 | 86.05 | uncharacterized protein LOC103498217 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |